BLASTX nr result

ID: Coptis25_contig00031706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031706
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531019.1| protein with unknown function [Ricinus commu...   130   9e-29
ref|XP_002268096.2| PREDICTED: uncharacterized protein LOC100248...   120   2e-25
ref|XP_002321114.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002446701.1| hypothetical protein SORBIDRAFT_06g020820 [S...   117   1e-24
emb|CBI39157.3| unnamed protein product [Vitis vinifera]              115   5e-24

>ref|XP_002531019.1| protein with unknown function [Ricinus communis]
           gi|223529394|gb|EEF31357.1| protein with unknown
           function [Ricinus communis]
          Length = 741

 Score =  130 bits (328), Expect = 9e-29
 Identities = 61/107 (57%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
 Frame = +2

Query: 218 PFFDTDDVSRPCENLVPGVLGNVSQASEASTGDPPEMYIPGLVIHIVA-QKASFLPLWKN 394
           PF +   V+ P  N V      V Q+   S GDPPEM++PGLVIH+V  ++ S +PLWK+
Sbjct: 621 PFHNEPAVANPSGNPVSQFFETVPQSKSWSAGDPPEMFLPGLVIHMVPRERNSSVPLWKS 680

Query: 395 WSINEREHNYRSYIANRENFKDIIVSPCMFLDHLPWRCHYAMQKALE 535
           W I E   +Y +Y+ANRE+FKDI+VSP MFLDHLPWRCHYAMQK LE
Sbjct: 681 WRIQENVQSYNAYLANREDFKDIVVSPNMFLDHLPWRCHYAMQKVLE 727


>ref|XP_002268096.2| PREDICTED: uncharacterized protein LOC100248021 [Vitis vinifera]
          Length = 1521

 Score =  120 bits (300), Expect = 2e-25
 Identities = 68/165 (41%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
 Frame = +2

Query: 44   HSGTVADEDDKYRMHRRKHWSCEEDQEIHILETADSIE-QLNASRESFDGFNCAQSSFAP 220
            H G V  E   + +H  +H +  E       +T+  IE  + +S +  D  +   S   P
Sbjct: 1343 HPGAVTAEGISH-IHGSQHMNNTEGNRTQDRDTSLWIEADMKSSSDESDLGDSPDSFCNP 1401

Query: 221  FFDTDDVSRPCENLVPGVLGNVSQASEASTGDPPEMYIPGLVIHIVAQKASF-LPLWKNW 397
            F +      P ++ V   +  V  +   S GDP ++++PGL+IHIV Q+ SF LPLWK  
Sbjct: 1402 FAEITADIIPSDDPVSEFMEAVPSSDNVSAGDPHDIFLPGLIIHIVPQQRSFHLPLWKGC 1461

Query: 398  SINEREHNYRSYIANRENFKDIIVSPCMFLDHLPWRCHYAMQKAL 532
             I E+  +Y++YI++RE FKDIIVSP MFLDHLPWRC+YAMQK L
Sbjct: 1462 RIQEKAPSYKAYISDRERFKDIIVSPSMFLDHLPWRCYYAMQKIL 1506


>ref|XP_002321114.1| predicted protein [Populus trichocarpa] gi|222861887|gb|EEE99429.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/107 (50%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = +2

Query: 218 PFFDTDDVSRPCENLVPGVLGNVSQASEASTGDPPEMYIPGLVIHIVAQKASF-LPLWKN 394
           PF+D   V    ++ V   L  V ++   S GD  EM++PGLVIH+V Q+    +PLWK 
Sbjct: 284 PFYDNTSVINSLDDPVSQFLETVPRSENGSAGDRAEMFLPGLVIHMVPQQRHISMPLWKG 343

Query: 395 WSINEREHNYRSYIANRENFKDIIVSPCMFLDHLPWRCHYAMQKALE 535
           W   ER  NY++Y+ANR+ FKDI+VSP MF DHLPWRCH AM++ LE
Sbjct: 344 WRFQERVRNYKAYLANRDVFKDIVVSPNMFFDHLPWRCHNAMKRVLE 390


>ref|XP_002446701.1| hypothetical protein SORBIDRAFT_06g020820 [Sorghum bicolor]
            gi|241937884|gb|EES11029.1| hypothetical protein
            SORBIDRAFT_06g020820 [Sorghum bicolor]
          Length = 782

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/147 (40%), Positives = 85/147 (57%), Gaps = 6/147 (4%)
 Frame = +2

Query: 113  EDQEIHILETADSIEQLNASRESFDGFNCAQSSFAPFFDTDDVSRPCENLVPGVLGNVSQ 292
            E Q  H +   ++   L   +  F G+N + +S       + ++   +  +  + G  S 
Sbjct: 617  ERQISHQVPLCNTEPDLQNMQNGFVGYNGSNASIDEHLSYEGINSGHDVQIIPLDGADSG 676

Query: 293  ASEASTG------DPPEMYIPGLVIHIVAQKASFLPLWKNWSINEREHNYRSYIANRENF 454
              E  T       +PPEM++PGL++HIV Q+ S  PLWK WSI E E  Y++ +A RENF
Sbjct: 677  FEEHPTSYREIPMEPPEMFLPGLIVHIVRQRRSLFPLWKCWSIQETEPPYKAVLAKRENF 736

Query: 455  KDIIVSPCMFLDHLPWRCHYAMQKALE 535
            +DI+V+P MF DHLPWRCH+AMQK LE
Sbjct: 737  RDIVVTPSMFTDHLPWRCHFAMQKILE 763


>emb|CBI39157.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/125 (46%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
 Frame = +2

Query: 161 LNASRESFDGFNCAQSSFAPFFDTDDVSRPCENLVPGVLGNVSQASEASTGDPPEMYIPG 340
           + +S +  D  +   S   PF +      P ++ V   +  V  +   S GDP ++++PG
Sbjct: 539 MKSSSDESDLGDSPDSFCNPFAEITADIIPSDDPVSEFMEAVPSSDNVSAGDPHDIFLPG 598

Query: 341 LVIHIVAQKASF-LPLWKNWSINEREHNYRSYIANRENFKDIIVSPCMFLDHLPWRCHYA 517
           L+IHIV Q+ SF LPLWK   I E+  +Y++YI++RE FKDIIVSP MFLDHLPWRC+YA
Sbjct: 599 LIIHIVPQQRSFHLPLWKGCRIQEKAPSYKAYISDRERFKDIIVSPSMFLDHLPWRCYYA 658

Query: 518 MQKAL 532
           MQK L
Sbjct: 659 MQKIL 663


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