BLASTX nr result

ID: Coptis25_contig00031680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031680
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20238.3| unnamed protein product [Vitis vinifera]              387   e-105
ref|XP_002282857.1| PREDICTED: protein transport protein Sec24-l...   387   e-105
ref|XP_002316316.1| predicted protein [Populus trichocarpa] gi|2...   384   e-104
ref|XP_002533043.1| Protein transport protein Sec24A, putative [...   382   e-104
ref|XP_002311138.1| predicted protein [Populus trichocarpa] gi|2...   380   e-103

>emb|CBI20238.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score =  387 bits (995), Expect = e-105
 Identities = 206/317 (64%), Positives = 242/317 (76%), Gaps = 1/317 (0%)
 Frame = -1

Query: 964  FGAQLSMDDTLLTTRTVYIQVALLYTSSCGQRRVRVHTAAAPVVTDLGEMYRHADTGAIV 785
            F  QL +++TLLTT+TVY QVALLYTSS G+RR+RVHTAAAPVV DLGEMYR ADTGA+V
Sbjct: 635  FAMQLCLEETLLTTQTVYFQVALLYTSSSGERRIRVHTAAAPVVADLGEMYRQADTGAVV 694

Query: 784  TLLTRLAIEKSLSHKLEDARDLVQLRIVKALREYRNLYSVQHRLGSSLIYPESXXXXXXX 605
            +L  RLAIEK+LSHKLEDAR+ VQLR+VKA +EYRNLY+VQHRLG  +IYPES       
Sbjct: 695  SLFCRLAIEKTLSHKLEDARNSVQLRLVKAFKEYRNLYAVQHRLGGRMIYPESLKLLPLY 754

Query: 604  XXXLCKSVPLRGGYADSHLDERLAAAYTMMTLPVTRLLKLLYPTLIRVDKYLTKEHANVD 425
               LCKS PLRGGYAD+ LDER AA YTMMTLPV RLLKLLYP+LIR+D+YL K  A  D
Sbjct: 755  ALALCKSTPLRGGYADAQLDERCAAGYTMMTLPVKRLLKLLYPSLIRIDEYLLKPTAQAD 814

Query: 424  ELGKILNKLPVAAKSLYSTGLYIYDDGLRLIIWFGKDLFSSIFSNLLGVNSSDF-IDISK 248
            E    L +LP+ A+SL S GLYIYDDG R +IWFG+ L   I  NLLG    DF  D+SK
Sbjct: 815  E----LKRLPLVAESLDSRGLYIYDDGFRFVIWFGRMLSPEIAMNLLG---QDFAADLSK 867

Query: 247  VPIVIRLALLSRKLMKVLERVRDSDRSCYQLCHLVRQGDQPREISLLLGNLVEDKIEGTS 68
            V +      +SRKLM +L++ R+SD S YQLCHLVRQG+QPRE   LL NLVED+I GT+
Sbjct: 868  VSLYEHDNEMSRKLMGILKKFRESDPSYYQLCHLVRQGEQPREGFFLLANLVEDQIGGTN 927

Query: 67   DYIDWMLQSYRLVQQSA 17
             Y DW+LQ +R VQQ+A
Sbjct: 928  GYADWILQIHRQVQQNA 944


>ref|XP_002282857.1| PREDICTED: protein transport protein Sec24-like At3g07100-like [Vitis
            vinifera]
          Length = 1052

 Score =  387 bits (995), Expect = e-105
 Identities = 206/317 (64%), Positives = 242/317 (76%), Gaps = 1/317 (0%)
 Frame = -1

Query: 964  FGAQLSMDDTLLTTRTVYIQVALLYTSSCGQRRVRVHTAAAPVVTDLGEMYRHADTGAIV 785
            F  QL +++TLLTT+TVY QVALLYTSS G+RR+RVHTAAAPVV DLGEMYR ADTGA+V
Sbjct: 743  FAMQLCLEETLLTTQTVYFQVALLYTSSSGERRIRVHTAAAPVVADLGEMYRQADTGAVV 802

Query: 784  TLLTRLAIEKSLSHKLEDARDLVQLRIVKALREYRNLYSVQHRLGSSLIYPESXXXXXXX 605
            +L  RLAIEK+LSHKLEDAR+ VQLR+VKA +EYRNLY+VQHRLG  +IYPES       
Sbjct: 803  SLFCRLAIEKTLSHKLEDARNSVQLRLVKAFKEYRNLYAVQHRLGGRMIYPESLKLLPLY 862

Query: 604  XXXLCKSVPLRGGYADSHLDERLAAAYTMMTLPVTRLLKLLYPTLIRVDKYLTKEHANVD 425
               LCKS PLRGGYAD+ LDER AA YTMMTLPV RLLKLLYP+LIR+D+YL K  A  D
Sbjct: 863  ALALCKSTPLRGGYADAQLDERCAAGYTMMTLPVKRLLKLLYPSLIRIDEYLLKPTAQAD 922

Query: 424  ELGKILNKLPVAAKSLYSTGLYIYDDGLRLIIWFGKDLFSSIFSNLLGVNSSDF-IDISK 248
            E    L +LP+ A+SL S GLYIYDDG R +IWFG+ L   I  NLLG    DF  D+SK
Sbjct: 923  E----LKRLPLVAESLDSRGLYIYDDGFRFVIWFGRMLSPEIAMNLLG---QDFAADLSK 975

Query: 247  VPIVIRLALLSRKLMKVLERVRDSDRSCYQLCHLVRQGDQPREISLLLGNLVEDKIEGTS 68
            V +      +SRKLM +L++ R+SD S YQLCHLVRQG+QPRE   LL NLVED+I GT+
Sbjct: 976  VSLYEHDNEMSRKLMGILKKFRESDPSYYQLCHLVRQGEQPREGFFLLANLVEDQIGGTN 1035

Query: 67   DYIDWMLQSYRLVQQSA 17
             Y DW+LQ +R VQQ+A
Sbjct: 1036 GYADWILQIHRQVQQNA 1052


>ref|XP_002316316.1| predicted protein [Populus trichocarpa] gi|222865356|gb|EEF02487.1|
            predicted protein [Populus trichocarpa]
          Length = 1037

 Score =  384 bits (987), Expect = e-104
 Identities = 197/316 (62%), Positives = 242/316 (76%)
 Frame = -1

Query: 964  FGAQLSMDDTLLTTRTVYIQVALLYTSSCGQRRVRVHTAAAPVVTDLGEMYRHADTGAIV 785
            +GAQLS+++TLLT++TVY QV LLYT+SCG+RR+RVHTAA PVVTDLGEMYR ADTGAIV
Sbjct: 724  YGAQLSLEETLLTSKTVYFQVVLLYTASCGERRIRVHTAAVPVVTDLGEMYRQADTGAIV 783

Query: 784  TLLTRLAIEKSLSHKLEDARDLVQLRIVKALREYRNLYSVQHRLGSSLIYPESXXXXXXX 605
            +L  RLAIEKSLSHKLEDAR  VQLRIVKALREYRNLY++QHRLG  +IYPE        
Sbjct: 784  SLFARLAIEKSLSHKLEDARSSVQLRIVKALREYRNLYAMQHRLGGRMIYPEPLKFLPLY 843

Query: 604  XXXLCKSVPLRGGYADSHLDERLAAAYTMMTLPVTRLLKLLYPTLIRVDKYLTKEHANVD 425
               LCKS  LRGGYAD  LD+R AA +TMM LPV  +LKLLYP+LIRVD+YL K  A  D
Sbjct: 844  GLALCKSAALRGGYADVQLDDRCAAGFTMMALPVKTMLKLLYPSLIRVDEYLLKPSAQAD 903

Query: 424  ELGKILNKLPVAAKSLYSTGLYIYDDGLRLIIWFGKDLFSSIFSNLLGVNSSDFIDISKV 245
            E   I+ +LP+ ++SL S GLY+YDDG R ++WFG+     +  NLLG +++  ++ SKV
Sbjct: 904  EFKNIMKRLPLTSESLDSRGLYVYDDGFRFVVWFGRMFSPDVAMNLLGQDAA--VEFSKV 961

Query: 244  PIVIRLALLSRKLMKVLERVRDSDRSCYQLCHLVRQGDQPREISLLLGNLVEDKIEGTSD 65
             +      +SRKLM +L+++RDSD S YQLC+LVRQG+QPRE  LLL NLVED+I G S 
Sbjct: 962  ALGKHDTEMSRKLMGLLKKLRDSDPSYYQLCNLVRQGEQPREGYLLLTNLVEDQIGGASG 1021

Query: 64   YIDWMLQSYRLVQQSA 17
            Y DWM+Q +R VQQ+A
Sbjct: 1022 YSDWMVQIHRQVQQNA 1037


>ref|XP_002533043.1| Protein transport protein Sec24A, putative [Ricinus communis]
            gi|223527181|gb|EEF29351.1| Protein transport protein
            Sec24A, putative [Ricinus communis]
          Length = 1031

 Score =  382 bits (981), Expect = e-104
 Identities = 196/316 (62%), Positives = 242/316 (76%)
 Frame = -1

Query: 964  FGAQLSMDDTLLTTRTVYIQVALLYTSSCGQRRVRVHTAAAPVVTDLGEMYRHADTGAIV 785
            +  QLS+++TLLTT+TVY QVALLYT+SCG+RR+RVHTAAAPVV DLG+MY HADTGAI 
Sbjct: 718  YAMQLSLEETLLTTQTVYFQVALLYTASCGERRIRVHTAAAPVVADLGDMYCHADTGAIA 777

Query: 784  TLLTRLAIEKSLSHKLEDARDLVQLRIVKALREYRNLYSVQHRLGSSLIYPESXXXXXXX 605
            +L  RLAIEK+LSHKLEDAR+ VQLRIVKA REYRNLY+VQHRLG  +IYPES       
Sbjct: 778  SLFCRLAIEKTLSHKLEDARNSVQLRIVKAFREYRNLYAVQHRLGGRMIYPESLKFLPLY 837

Query: 604  XXXLCKSVPLRGGYADSHLDERLAAAYTMMTLPVTRLLKLLYPTLIRVDKYLTKEHANVD 425
               LCKS PLRGGYAD  LDER AA +TMM+LPV +LLKLLYP LIR+D +L K     D
Sbjct: 838  GLALCKSTPLRGGYADVQLDERCAAGFTMMSLPVKKLLKLLYPCLIRIDDHLLKPSTQAD 897

Query: 424  ELGKILNKLPVAAKSLYSTGLYIYDDGLRLIIWFGKDLFSSIFSNLLGVNSSDFIDISKV 245
            E   I+ +L + A+SL S GLYIYDDG R ++WFG+ L   I   LLG +++   ++SKV
Sbjct: 898  EFRNIIRRLTLTAESLDSRGLYIYDDGFRFVLWFGRMLSPDIAMGLLGPDAA--AELSKV 955

Query: 244  PIVIRLALLSRKLMKVLERVRDSDRSCYQLCHLVRQGDQPREISLLLGNLVEDKIEGTSD 65
             +      +SRKLM++L+++R+SD S YQLCHLVRQG+QPRE  LLL NLVED+  GT+ 
Sbjct: 956  TLREHDTEMSRKLMEILKKLRESDHSYYQLCHLVRQGEQPREGFLLLMNLVEDQSGGTNG 1015

Query: 64   YIDWMLQSYRLVQQSA 17
            Y+DWM+Q +R VQQ+A
Sbjct: 1016 YVDWMVQIHRQVQQNA 1031


>ref|XP_002311138.1| predicted protein [Populus trichocarpa] gi|222850958|gb|EEE88505.1|
            predicted protein [Populus trichocarpa]
          Length = 1043

 Score =  380 bits (975), Expect = e-103
 Identities = 198/316 (62%), Positives = 240/316 (75%)
 Frame = -1

Query: 964  FGAQLSMDDTLLTTRTVYIQVALLYTSSCGQRRVRVHTAAAPVVTDLGEMYRHADTGAIV 785
            +GAQLS+++TLLT++TVY QVALLYT+SCG+RR+RVHTAA PVVTDLGEMYR AD GAIV
Sbjct: 730  YGAQLSLEETLLTSQTVYFQVALLYTASCGERRIRVHTAAVPVVTDLGEMYRQADAGAIV 789

Query: 784  TLLTRLAIEKSLSHKLEDARDLVQLRIVKALREYRNLYSVQHRLGSSLIYPESXXXXXXX 605
            +L  RLAIEKSLSHKLEDAR  VQLRIVKALRE+RNLY+VQHRLG  +IYPES       
Sbjct: 790  SLFARLAIEKSLSHKLEDARSSVQLRIVKALREFRNLYAVQHRLGGRMIYPESLKLLPLY 849

Query: 604  XXXLCKSVPLRGGYADSHLDERLAAAYTMMTLPVTRLLKLLYPTLIRVDKYLTKEHANVD 425
               L KS  LRGGYAD  LD+R AA +TMM LPV +LLKLLYP+LIRVD+YL K  A  D
Sbjct: 850  GLALSKSAALRGGYADVQLDDRCAAGFTMMALPVKKLLKLLYPSLIRVDEYLLKPSAQTD 909

Query: 424  ELGKILNKLPVAAKSLYSTGLYIYDDGLRLIIWFGKDLFSSIFSNLLGVNSSDFIDISKV 245
            E   I+ +LP+ A+SL S GLY+YDDG R ++WFG+ L   +  NLLG +++   + SKV
Sbjct: 910  EFKNIMKRLPLTAESLDSRGLYVYDDGFRFVVWFGRMLSPDLAMNLLGQDAA--AEFSKV 967

Query: 244  PIVIRLALLSRKLMKVLERVRDSDRSCYQLCHLVRQGDQPREISLLLGNLVEDKIEGTSD 65
                    +SRKLM VL ++R+SD S YQLC+LVRQG+QPRE   LL N VED+I GTS 
Sbjct: 968  SFGKHDTEMSRKLMGVLRKLRESDPSYYQLCNLVRQGEQPREGFFLLTNFVEDQIGGTSG 1027

Query: 64   YIDWMLQSYRLVQQSA 17
            Y +WM+Q +R VQQ+A
Sbjct: 1028 YSEWMVQIHRQVQQNA 1043


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