BLASTX nr result

ID: Coptis25_contig00031656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031656
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20239.3| unnamed protein product [Vitis vinifera]              176   2e-63
ref|XP_002282843.1| PREDICTED: uncharacterized protein LOC100262...   176   1e-62
emb|CAN79800.1| hypothetical protein VITISV_010923 [Vitis vinifera]   176   3e-62
ref|XP_003574436.1| PREDICTED: uncharacterized protein LOC100827...   164   3e-60
dbj|BAJ99510.1| predicted protein [Hordeum vulgare subsp. vulgar...   161   1e-59

>emb|CBI20239.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  176 bits (445), Expect(2) = 2e-63
 Identities = 89/170 (52%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
 Frame = +1

Query: 286 SAATYXXXXXXXXXXXXXXWVGSSSNNIFMSTLVYGDTRSSTITVKYIXXXXXXXXXXXX 465
           SAAT               WVGSSS NIF S  +YGDT SSTI++KYI            
Sbjct: 482 SAATSMSSISLTLSSLIGAWVGSSSQNIFKSGFIYGDTSSSTISIKYISLLACFLLAFAC 541

Query: 466 XIHSTRYYVHANFLISTPNTDIPVKYVELAVIRGSNFWSLGLRALYFATTLLLWIFGPIP 645
            + S RY+V  NF IS PN++IPVKYV+ A++ G  FWS+GLRALY A TLLLWIFGPIP
Sbjct: 542 FVQSARYFVQVNFFISMPNSEIPVKYVQKAMLSGGVFWSVGLRALYLAVTLLLWIFGPIP 601

Query: 646 MFASSVFMVTLLHFLDTNSIPLHQYKPPN-HAFVKSKGGQMNVVPRSIEH 792
           MF SSV +V ++H LDTNS PLHQ++P N H  +K  G +++ V  +IEH
Sbjct: 602 MFVSSVILVVIMHNLDTNSNPLHQFQPANKHNLLKKIGEEISAVASAIEH 651



 Score = 93.6 bits (231), Expect(2) = 2e-63
 Identities = 43/75 (57%), Positives = 57/75 (76%)
 Frame = +3

Query: 81  KRMVLQKEYLDMVLVPCGLVLMFGYHLFLLYRIIMHPHTTAIGYENHNKRAWVERMMQVD 260
           +RM  +KEYLD++LVP GL++MFGY+L+LLYR + H  TT IGYENH KR W+ERM+QV+
Sbjct: 407 ERMDWEKEYLDLILVPSGLLIMFGYYLYLLYRCLKHTDTTVIGYENHIKRTWIERMLQVE 466

Query: 261 PDMKETGHKCSYLFS 305
           P  K+ G   S + S
Sbjct: 467 P--KDRGQAISVIGS 479


>ref|XP_002282843.1| PREDICTED: uncharacterized protein LOC100262274 [Vitis vinifera]
          Length = 260

 Score =  176 bits (445), Expect(2) = 1e-62
 Identities = 89/170 (52%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
 Frame = +1

Query: 286 SAATYXXXXXXXXXXXXXXWVGSSSNNIFMSTLVYGDTRSSTITVKYIXXXXXXXXXXXX 465
           SAAT               WVGSSS NIF S  +YGDT SSTI++KYI            
Sbjct: 74  SAATSMSSISLTLSSLIGAWVGSSSQNIFKSGFIYGDTSSSTISIKYISLLACFLLAFAC 133

Query: 466 XIHSTRYYVHANFLISTPNTDIPVKYVELAVIRGSNFWSLGLRALYFATTLLLWIFGPIP 645
            + S RY+V  NF IS PN++IPVKYV+ A++ G  FWS+GLRALY A TLLLWIFGPIP
Sbjct: 134 FVQSARYFVQVNFFISMPNSEIPVKYVQKAMLSGGVFWSVGLRALYLAVTLLLWIFGPIP 193

Query: 646 MFASSVFMVTLLHFLDTNSIPLHQYKPPN-HAFVKSKGGQMNVVPRSIEH 792
           MF SSV +V ++H LDTNS PLHQ++P N H  +K  G +++ V  +IEH
Sbjct: 194 MFVSSVILVVIMHNLDTNSNPLHQFQPANKHNLLKKIGEEISAVASAIEH 243



 Score = 91.3 bits (225), Expect(2) = 1e-62
 Identities = 41/70 (58%), Positives = 54/70 (77%)
 Frame = +3

Query: 96  QKEYLDMVLVPCGLVLMFGYHLFLLYRIIMHPHTTAIGYENHNKRAWVERMMQVDPDMKE 275
           +KEYLD++LVP GL++MFGY+L+LLYR + H  TT IGYENH KR W+ERM+QV+P  K+
Sbjct: 4   EKEYLDLILVPSGLLIMFGYYLYLLYRCLKHTDTTVIGYENHIKRTWIERMLQVEP--KD 61

Query: 276 TGHKCSYLFS 305
            G   S + S
Sbjct: 62  RGQAISVIGS 71


>emb|CAN79800.1| hypothetical protein VITISV_010923 [Vitis vinifera]
          Length = 260

 Score =  176 bits (445), Expect(2) = 3e-62
 Identities = 89/170 (52%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
 Frame = +1

Query: 286 SAATYXXXXXXXXXXXXXXWVGSSSNNIFMSTLVYGDTRSSTITVKYIXXXXXXXXXXXX 465
           SAAT               WVGSSS NIF S  +YGDT SSTI++KYI            
Sbjct: 74  SAATSMSSISLTLSSLIGAWVGSSSQNIFKSGFIYGDTSSSTISIKYISLLACFLLAFAC 133

Query: 466 XIHSTRYYVHANFLISTPNTDIPVKYVELAVIRGSNFWSLGLRALYFATTLLLWIFGPIP 645
            + S RY+V  NF IS PN++IPVKYV+ A++ G  FWS+GLRALY A TLLLWIFGPIP
Sbjct: 134 FVQSARYFVQVNFFISMPNSEIPVKYVQKAMLSGGVFWSVGLRALYLAVTLLLWIFGPIP 193

Query: 646 MFASSVFMVTLLHFLDTNSIPLHQYKPPN-HAFVKSKGGQMNVVPRSIEH 792
           MF SSV +V ++H LDTNS PLHQ++P N H  +K  G +++ V  +IEH
Sbjct: 194 MFVSSVILVVIMHNLDTNSNPLHQFQPANKHNLLKKIGEEISAVASAIEH 243



 Score = 89.7 bits (221), Expect(2) = 3e-62
 Identities = 41/73 (56%), Positives = 54/73 (73%)
 Frame = +3

Query: 87  MVLQKEYLDMVLVPCGLVLMFGYHLFLLYRIIMHPHTTAIGYENHNKRAWVERMMQVDPD 266
           M  + EYLD++LVP GL++MFGY+L+LLYR + H  TT IGYENH KR W+ERM+QV+P 
Sbjct: 1   MXWEXEYLDLILVPSGLLIMFGYYLYLLYRCLKHTDTTVIGYENHIKRTWIERMLQVEP- 59

Query: 267 MKETGHKCSYLFS 305
            K+ G   S + S
Sbjct: 60  -KDRGQAISVIGS 71


>ref|XP_003574436.1| PREDICTED: uncharacterized protein LOC100827597 [Brachypodium
           distachyon]
          Length = 258

 Score =  164 bits (416), Expect(2) = 3e-60
 Identities = 79/127 (62%), Positives = 96/127 (75%)
 Frame = +1

Query: 343 WVGSSSNNIFMSTLVYGDTRSSTITVKYIXXXXXXXXXXXXXIHSTRYYVHANFLISTPN 522
           WV SS+  +FM+ LVYGDT  +T  VKYI             IHS RYYV A+FL+ST +
Sbjct: 93  WV-SSTTKVFMTQLVYGDTSQATAAVKYISLLVCFLVSFTCFIHSARYYVQASFLVSTLD 151

Query: 523 TDIPVKYVELAVIRGSNFWSLGLRALYFATTLLLWIFGPIPMFASSVFMVTLLHFLDTNS 702
           +D+P  YV+ A+IRG NFWS GLRALYFATTLL+WIFGPIPMFA SVFMV +LHFLD+NS
Sbjct: 152 SDVPASYVQHAMIRGGNFWSTGLRALYFATTLLMWIFGPIPMFACSVFMVFILHFLDSNS 211

Query: 703 IPLHQYK 723
           +PLHQ++
Sbjct: 212 LPLHQHQ 218



 Score = 94.4 bits (233), Expect(2) = 3e-60
 Identities = 42/60 (70%), Positives = 48/60 (80%)
 Frame = +3

Query: 87  MVLQKEYLDMVLVPCGLVLMFGYHLFLLYRIIMHPHTTAIGYENHNKRAWVERMMQVDPD 266
           M+ +K  LD+VLVPCGLV+MFGYHL LLYRI+ HP TT IGYENHNK AWV RM Q  P+
Sbjct: 1   MLREKGSLDLVLVPCGLVIMFGYHLLLLYRILRHPGTTVIGYENHNKLAWVRRMTQTTPE 60


>dbj|BAJ99510.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326521520|dbj|BAK00336.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 258

 Score =  161 bits (407), Expect(2) = 1e-59
 Identities = 76/127 (59%), Positives = 95/127 (74%)
 Frame = +1

Query: 343 WVGSSSNNIFMSTLVYGDTRSSTITVKYIXXXXXXXXXXXXXIHSTRYYVHANFLISTPN 522
           WV SS++ +FM+ LVYGD   +T  VKYI             IHS RYYV A+FL++T +
Sbjct: 93  WV-SSTSKVFMTELVYGDNSQATAAVKYISLLVCFLVSFTCFIHSARYYVQASFLVTTLD 151

Query: 523 TDIPVKYVELAVIRGSNFWSLGLRALYFATTLLLWIFGPIPMFASSVFMVTLLHFLDTNS 702
           +D+P  Y++ AVIRG NFWS+GLRALYFATTLL+WIFGPIPMF  SVFMV +LH LD+NS
Sbjct: 152 SDVPASYMQHAVIRGGNFWSMGLRALYFATTLLMWIFGPIPMFVCSVFMVFILHMLDSNS 211

Query: 703 IPLHQYK 723
           +PLHQY+
Sbjct: 212 LPLHQYQ 218



 Score = 95.9 bits (237), Expect(2) = 1e-59
 Identities = 47/73 (64%), Positives = 53/73 (72%)
 Frame = +3

Query: 87  MVLQKEYLDMVLVPCGLVLMFGYHLFLLYRIIMHPHTTAIGYENHNKRAWVERMMQVDPD 266
           M+L K  LD+VLVPCGLV+MFGYHL LLYRI+ HP  T IGYENHNK AWV RM Q  P+
Sbjct: 1   MMLDKGSLDLVLVPCGLVIMFGYHLILLYRILRHPAATVIGYENHNKLAWVRRMAQATPE 60

Query: 267 MKETGHKCSYLFS 305
             ETG   S + S
Sbjct: 61  --ETGLAMSVISS 71


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