BLASTX nr result

ID: Coptis25_contig00031654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031654
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542144.1| PREDICTED: probable receptor-like protein ki...    81   1e-13
emb|CBI18975.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002284588.1| PREDICTED: probable receptor-like protein ki...    79   5e-13
ref|XP_003547530.1| PREDICTED: probable receptor-like protein ki...    78   9e-13
ref|XP_004166968.1| PREDICTED: LOW QUALITY PROTEIN: probable rec...    77   1e-12

>ref|XP_003542144.1| PREDICTED: probable receptor-like protein kinase At1g11050-like
           [Glycine max]
          Length = 613

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
 Frame = -2

Query: 221 LTIAFLSL-VASVLSTNMSSCPIDLNYIHTIPWNTSVCQSPTNSNTANQICCQALLSLFG 45
           L +  +SL   S+ + + SSCP+DLNY+ T PW++S C+ P + N     CCQ LLS+ G
Sbjct: 9   LPLLIMSLFTVSIAAESSSSCPMDLNYVETFPWDSSSCRDPVDKNH----CCQVLLSVIG 64

Query: 44  IGLAQHLKETSLFQ 3
           IGL+QHLK+TSLFQ
Sbjct: 65  IGLSQHLKQTSLFQ 78


>emb|CBI18975.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/71 (54%), Positives = 47/71 (66%)
 Frame = -2

Query: 215 IAFLSLVASVLSTNMSSCPIDLNYIHTIPWNTSVCQSPTNSNTANQICCQALLSLFGIGL 36
           I  LSL    + +  SSCPIDL Y+ T PW+TS C+     +     CC ALLSLFG+GL
Sbjct: 11  IVSLSLFVFSVDSASSSCPIDLGYVETYPWDTSSCRDGDQDH-----CCMALLSLFGMGL 65

Query: 35  AQHLKETSLFQ 3
           AQHLKETS+FQ
Sbjct: 66  AQHLKETSMFQ 76


>ref|XP_002284588.1| PREDICTED: probable receptor-like protein kinase At1g11050 [Vitis
           vinifera]
          Length = 612

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/71 (54%), Positives = 47/71 (66%)
 Frame = -2

Query: 215 IAFLSLVASVLSTNMSSCPIDLNYIHTIPWNTSVCQSPTNSNTANQICCQALLSLFGIGL 36
           I  LSL    + +  SSCPIDL Y+ T PW+TS C+     +     CC ALLSLFG+GL
Sbjct: 11  IVSLSLFVFSVDSASSSCPIDLGYVETYPWDTSSCRDGDQDH-----CCMALLSLFGMGL 65

Query: 35  AQHLKETSLFQ 3
           AQHLKETS+FQ
Sbjct: 66  AQHLKETSMFQ 76


>ref|XP_003547530.1| PREDICTED: probable receptor-like protein kinase At1g11050-like
           [Glycine max]
          Length = 642

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
 Frame = -2

Query: 203 SLVASVLSTNMSSCPIDLNYIHTIPWNTSVCQS-----PTNSNTANQICCQALLSLFGIG 39
           +L +   S N ++CP+DLNY+  IPWNTS C +        + T    CC +LLSLFGIG
Sbjct: 9   ALFSCTSSANTTTCPMDLNYVLRIPWNTSACHNFQQTLAAKNGTDANTCCISLLSLFGIG 68

Query: 38  LAQHLKETSLFQ 3
           LAQHLKETS FQ
Sbjct: 69  LAQHLKETSQFQ 80


>ref|XP_004166968.1| PREDICTED: LOW QUALITY PROTEIN: probable receptor-like protein
           kinase At1g11050-like [Cucumis sativus]
          Length = 649

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 10/82 (12%)
 Frame = -2

Query: 221 LTIAFLSLVASVLSTNMSS--CPIDLNYIHTIPWNTSVCQSPTNSNTANQI--------C 72
           L +  LS+ ++  +T +++  CP+DLNYI  IPWN + CQ+P    TA           C
Sbjct: 9   LLLCLLSITSTSAATPIANPICPMDLNYILRIPWNATDCQNPFFQTTAQSAMNDTSKIPC 68

Query: 71  CQALLSLFGIGLAQHLKETSLF 6
           CQ LLSLFGI LAQHLKETSLF
Sbjct: 69  CQTLLSLFGIALAQHLKETSLF 90


Top