BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031653
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524459.1| conserved hypothetical protein [Ricinus comm...   112   2e-23
ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containin...   100   2e-19
ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containin...    96   4e-18
ref|XP_002305494.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13

>ref|XP_002524459.1| conserved hypothetical protein [Ricinus communis]
           gi|223536247|gb|EEF37899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 341

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/115 (44%), Positives = 70/115 (60%), Gaps = 7/115 (6%)
 Frame = -1

Query: 325 FFQPTPFASSGDDSVGFWPEIPINNN-------DRPVPPLKRPRNSEATPLVPVPNHNMN 167
           F  P P   SG D++G WP+ P+N+N       D   PP KRPRNSE        N +MN
Sbjct: 10  FMSPQPTYQSGSDAIGIWPQFPMNSNEQFDPQFDHHQPPFKRPRNSEDN------NQSMN 63

Query: 166 LRIPLPPNPLANRRMNKLFFKTRLCEKFRQGTCPYGSSCHYAHGIEEMRKAPPNW 2
            R+P P N   N+    +FFKTR+C KF+ G+C  G +C++AHG+++MR+ PPNW
Sbjct: 64  YRMPPPNNLPINKGTTNIFFKTRMCAKFKTGSCRNGENCNFAHGMQDMRQPPPNW 118


>ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Vitis vinifera]
          Length = 349

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 6/104 (5%)
 Frame = -1

Query: 295 GDDSVGFWPEIPINNNDRPV------PPLKRPRNSEATPLVPVPNHNMNLRIPLPPNPLA 134
           GDD +G W + P+NN +  V      PP KR RNSE       P+ +MN RI  PPN   
Sbjct: 20  GDDDIGSWSQFPMNNEEYEVHSHFEYPPHKRTRNSEGQMPNSSPHPSMNPRIH-PPNAPT 78

Query: 133 NRRMNKLFFKTRLCEKFRQGTCPYGSSCHYAHGIEEMRKAPPNW 2
           +R  + +FFKTR+C KF+ G C  G +C++AHG+E+MR+ PPNW
Sbjct: 79  SRGTSNIFFKTRICAKFKLGQCRNGENCNFAHGMEDMRQPPPNW 122


>ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|222850140|gb|EEE87687.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
 Frame = -1

Query: 334 HLIFFQPTPFASSGDDSVGFWPEIPINNNDR---PVPPLKRPRNSEATPLVPVPNHNMNL 164
           H  F  P     +G D++G WP+  +NN ++     PP KRPRNSE  P     N ++N 
Sbjct: 7   HDSFMSPQASYQAGSDAIGVWPQFVMNNIEQFEHHQPPYKRPRNSEDNP-----NQSVNS 61

Query: 163 RIPLPPNPLANRRMNKLFFKTRLCEKFRQGTCPYGSSCHYAHGIEEMRKAPPNW 2
           R P   N   ++    +FFKTR+C KF+ GTC  G +C++AHG++++R+ PPNW
Sbjct: 62  RTPPTNNLPVHKGATNIFFKTRVCAKFKTGTCRNGENCNFAHGMQDLRQPPPNW 115


>ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Cucumis sativus] gi|449520655|ref|XP_004167349.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           39-like [Cucumis sativus]
          Length = 347

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/115 (42%), Positives = 66/115 (57%), Gaps = 10/115 (8%)
 Frame = -1

Query: 316 PTPFASSGD--DSVGFWPEIPINNNDRPV-------PPLKRPRNSEATPLVPVPNHNMNL 164
           P P  S G   D+ G W + P N+   P        PP KR RNSE  P  P+   N +L
Sbjct: 12  PPPLHSYGSNGDASGCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENPSSPISYSNPSL 71

Query: 163 RIP-LPPNPLANRRMNKLFFKTRLCEKFRQGTCPYGSSCHYAHGIEEMRKAPPNW 2
                PPN   N+ ++ +FFKTR+C KF+ G C  G+SC++AHG+E+MR+ PPNW
Sbjct: 72  NSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNW 126


>ref|XP_002305494.1| predicted protein [Populus trichocarpa] gi|222848458|gb|EEE86005.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
 Frame = -1

Query: 235 PPLKRPRNSEATPLVPVPNHNMNLRIPLPPNPL-ANRRMNKLFFKTRLCEKFRQGTCPYG 59
           PP KRPRNSE        N +M+ R+P P N L  ++    +FFKTR+C KF+ GTC  G
Sbjct: 16  PPYKRPRNSEDNS-----NQSMSSRVP-PTNSLPVHKGTTNIFFKTRVCAKFKTGTCRNG 69

Query: 58  SSCHYAHGIEEMRKAPPNW 2
            +C++AHG++++R+ PPNW
Sbjct: 70  ENCNFAHGMQDLRQPPPNW 88