BLASTX nr result

ID: Coptis25_contig00031650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031650
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542521.1| PREDICTED: probable xyloglucan endotransgluc...   149   5e-54
ref|XP_003554394.1| PREDICTED: probable xyloglucan endotransgluc...   150   2e-53
ref|XP_003625695.1| Xyloglucan endotransglucosylase/hydrolase [M...   152   6e-53
ref|NP_001241974.1| uncharacterized protein LOC100796698 precurs...   148   7e-53
gb|ABU93485.1| xyloglucan endotraglucosylase/hydrolase [Vigna an...   150   1e-52

>ref|XP_003542521.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 32-like [Glycine max]
          Length = 296

 Score =  149 bits (376), Expect(2) = 5e-54
 Identities = 71/78 (91%), Positives = 73/78 (93%)
 Frame = -2

Query: 235 SGFKSKVPFRSGYFGSSIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTPGKPY 56
           SGFKS  PFRSGYFG+SIKL PGYTAGVITAFYLSNNEAHPG+HDEVDIEFLGTT GKPY
Sbjct: 70  SGFKSNRPFRSGYFGASIKLHPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPY 129

Query: 55  TLQTNVYIRGSGDGKIIG 2
           TLQTNVYIRGSGDG IIG
Sbjct: 130 TLQTNVYIRGSGDGTIIG 147



 Score = 87.8 bits (216), Expect(2) = 5e-54
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = -1

Query: 479 PSPGYSPTSKFRTVNFYRGFRNLWGPQHQTVEQNALTIWLDRNTG 345
           PSPGY P+SKFR VNFYRGFRNLWGPQHQ+++QNALTIWLD ++G
Sbjct: 25  PSPGYRPSSKFRPVNFYRGFRNLWGPQHQSIDQNALTIWLDSSSG 69


>ref|XP_003554394.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 32-like [Glycine max]
          Length = 293

 Score =  150 bits (379), Expect(2) = 2e-53
 Identities = 71/78 (91%), Positives = 75/78 (96%)
 Frame = -2

Query: 235 SGFKSKVPFRSGYFGSSIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTPGKPY 56
           SGFKS  PFRSGYFG+SIK+QPGYTAGVITAFYLSNNEAHPG+HDEVDIEFLGTT GKPY
Sbjct: 67  SGFKSVRPFRSGYFGASIKVQPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPY 126

Query: 55  TLQTNVYIRGSGDGKIIG 2
           TLQTNVYIRGSGDG+IIG
Sbjct: 127 TLQTNVYIRGSGDGRIIG 144



 Score = 84.7 bits (208), Expect(2) = 2e-53
 Identities = 34/45 (75%), Positives = 43/45 (95%)
 Frame = -1

Query: 479 PSPGYSPTSKFRTVNFYRGFRNLWGPQHQTVEQNALTIWLDRNTG 345
           PSPGY P+SKFR+++FY+GFRNLWGPQHQ+++QNALTIWLDR +G
Sbjct: 22  PSPGYWPSSKFRSMSFYKGFRNLWGPQHQSLDQNALTIWLDRTSG 66


>ref|XP_003625695.1| Xyloglucan endotransglucosylase/hydrolase [Medicago truncatula]
           gi|355500710|gb|AES81913.1| Xyloglucan
           endotransglucosylase/hydrolase [Medicago truncatula]
          Length = 293

 Score =  152 bits (384), Expect(2) = 6e-53
 Identities = 71/78 (91%), Positives = 75/78 (96%)
 Frame = -2

Query: 235 SGFKSKVPFRSGYFGSSIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTPGKPY 56
           SGFKS  PFRSGYFG+SIKLQPGYTAGVIT+FYLSNNEAHPGYHDEVDIEFLGTT GKPY
Sbjct: 67  SGFKSVRPFRSGYFGASIKLQPGYTAGVITSFYLSNNEAHPGYHDEVDIEFLGTTFGKPY 126

Query: 55  TLQTNVYIRGSGDGKIIG 2
           TLQTNVY+RGSGDGKI+G
Sbjct: 127 TLQTNVYVRGSGDGKIVG 144



 Score = 81.3 bits (199), Expect(2) = 6e-53
 Identities = 33/45 (73%), Positives = 40/45 (88%)
 Frame = -1

Query: 479 PSPGYSPTSKFRTVNFYRGFRNLWGPQHQTVEQNALTIWLDRNTG 345
           PSPGY P+SKF+++NFY+GF N WGPQHQ +EQNALTIWLDR +G
Sbjct: 22  PSPGYWPSSKFKSMNFYKGFTNRWGPQHQRLEQNALTIWLDRTSG 66


>ref|NP_001241974.1| uncharacterized protein LOC100796698 precursor [Glycine max]
           gi|255634815|gb|ACU17768.1| unknown [Glycine max]
          Length = 293

 Score =  148 bits (374), Expect(2) = 7e-53
 Identities = 70/78 (89%), Positives = 75/78 (96%)
 Frame = -2

Query: 235 SGFKSKVPFRSGYFGSSIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTPGKPY 56
           SGFKS  PFRSGYFG+SIK+QPGYTAGVITAFYLSNNEAHPG+HDEVDIEFLGTT GKPY
Sbjct: 67  SGFKSVRPFRSGYFGASIKVQPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPY 126

Query: 55  TLQTNVYIRGSGDGKIIG 2
           TLQTNV+IRGSGDG+IIG
Sbjct: 127 TLQTNVHIRGSGDGRIIG 144



 Score = 84.7 bits (208), Expect(2) = 7e-53
 Identities = 34/45 (75%), Positives = 43/45 (95%)
 Frame = -1

Query: 479 PSPGYSPTSKFRTVNFYRGFRNLWGPQHQTVEQNALTIWLDRNTG 345
           PSPGY P+SKFR+++FY+GFRNLWGPQHQ+++QNALTIWLDR +G
Sbjct: 22  PSPGYWPSSKFRSMSFYKGFRNLWGPQHQSLDQNALTIWLDRTSG 66


>gb|ABU93485.1| xyloglucan endotraglucosylase/hydrolase [Vigna angularis]
          Length = 293

 Score =  150 bits (379), Expect(2) = 1e-52
 Identities = 71/78 (91%), Positives = 75/78 (96%)
 Frame = -2

Query: 235 SGFKSKVPFRSGYFGSSIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTPGKPY 56
           SGFKS  PFRSGYFG+SIK+QPGYTAGVITAFYLSNNEAHPG+HDEVDIEFLGTT GKPY
Sbjct: 67  SGFKSVRPFRSGYFGASIKVQPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPY 126

Query: 55  TLQTNVYIRGSGDGKIIG 2
           TLQTNVYIRGSGDG+IIG
Sbjct: 127 TLQTNVYIRGSGDGRIIG 144



 Score = 82.4 bits (202), Expect(2) = 1e-52
 Identities = 33/45 (73%), Positives = 42/45 (93%)
 Frame = -1

Query: 479 PSPGYSPTSKFRTVNFYRGFRNLWGPQHQTVEQNALTIWLDRNTG 345
           PSPGY P+SKF +++FY+GFRNLWGPQHQ+++QNALTIWLDR +G
Sbjct: 22  PSPGYWPSSKFSSMSFYKGFRNLWGPQHQSLDQNALTIWLDRTSG 66


Top