BLASTX nr result

ID: Coptis25_contig00031628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031628
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAP59644.1| putative neutral invertase [Vitis vinifera]            58   9e-07
gb|ABS52644.1| neutral invertase [Vitis vinifera]                      58   9e-07
emb|CAN63178.1| hypothetical protein VITISV_029106 [Vitis vinifera]    57   1e-06
emb|CAP59643.1| putative neutral invertase [Vitis vinifera]            57   2e-06
ref|XP_002280462.1| PREDICTED: uncharacterized protein LOC100233...    57   2e-06

>emb|CAP59644.1| putative neutral invertase [Vitis vinifera]
          Length = 676

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
 Frame = +1

Query: 121 PCCSSRILISSSKCYHSNKLTRPIRRLHCLGFNSNNNKCLIDTNKITAPPIISNWGKIKV 300
           P   S   I+ +     +KLT+  RR HC        KC I++N+        NWG+I+V
Sbjct: 31  PSSKSNHFIADNSSKFQSKLTQS-RRFHCCSAQILGKKCGINSNRRAFRFSDPNWGQIRV 89

Query: 301 LFSCNNIGRGR-GNLVILNVASNVRQHSSSVE 393
             SC+    GR G LVI NVAS+ R+HS+SVE
Sbjct: 90  YRSCSGAHGGRRGVLVISNVASDFRKHSTSVE 121


>gb|ABS52644.1| neutral invertase [Vitis vinifera]
          Length = 673

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
 Frame = +1

Query: 121 PCCSSRILISSSKCYHSNKLTRPIRRLHCLGFNSNNNKCLIDTNKITAPPIISNWGKIKV 300
           P   S   I+ +     +KLT+  RR HC        KC I++N+        NWG+I+V
Sbjct: 31  PSSKSNHFIADNSSKFQSKLTQS-RRFHCCSAQILGKKCGINSNRRAFRFSDPNWGQIRV 89

Query: 301 LFSCNNIGRGR-GNLVILNVASNVRQHSSSVE 393
             SC+    GR G LVI NVAS+ R+HS+SVE
Sbjct: 90  YRSCSGAHGGRRGVLVISNVASDFRKHSTSVE 121


>emb|CAN63178.1| hypothetical protein VITISV_029106 [Vitis vinifera]
          Length = 673

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 44/113 (38%), Positives = 55/113 (48%), Gaps = 17/113 (15%)
 Frame = +1

Query: 106 ITRMNPCC--------SSRILISSSKCYH-----SNKLTRPI---RRLHCLGFNSNNNKC 237
           IT M P C        SS     SSK  H     S+K    +   RR HC        KC
Sbjct: 9   ITTMKPYCRVLTSCRNSSIFKFPSSKSNHFIADNSSKFQSKLXXSRRFHCCSAQILGKKC 68

Query: 238 LIDTNKITAPPIISNWGKIKVLFSCNNI-GRGRGNLVILNVASNVRQHSSSVE 393
            I++N+        NWG+I+V  SC+   G  RG LVI NVAS+ R+HS+SVE
Sbjct: 69  GINSNRRAFRXSDPNWGQIRVYRSCSGAHGGRRGVLVISNVASDFRKHSTSVE 121


>emb|CAP59643.1| putative neutral invertase [Vitis vinifera]
          Length = 676

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 44/113 (38%), Positives = 55/113 (48%), Gaps = 17/113 (15%)
 Frame = +1

Query: 106 ITRMNPCC--------SSRILISSSKCYH-----SNKLTRPI---RRLHCLGFNSNNNKC 237
           IT M P C        SS     SSK  H     S+K    +   RR HC        KC
Sbjct: 9   ITTMKPYCRVLTSCRNSSIFKFPSSKSNHFIADNSSKFQSKLIHSRRFHCCSAQILGKKC 68

Query: 238 LIDTNKITAPPIISNWGKIKVLFSCNNIGRGR-GNLVILNVASNVRQHSSSVE 393
            I++N+        NWG+I+V  SC+    GR G LVI NVAS+ R+HS+SVE
Sbjct: 69  GINSNRRAFRLSDPNWGQIRVYRSCSGAHGGRRGVLVISNVASDFRKHSTSVE 121


>ref|XP_002280462.1| PREDICTED: uncharacterized protein LOC100233037 [Vitis vinifera]
           gi|296083207|emb|CBI22843.3| unnamed protein product
           [Vitis vinifera]
          Length = 673

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 44/113 (38%), Positives = 55/113 (48%), Gaps = 17/113 (15%)
 Frame = +1

Query: 106 ITRMNPCC--------SSRILISSSKCYH-----SNKLTRPI---RRLHCLGFNSNNNKC 237
           IT M P C        SS     SSK  H     S+K    +   RR HC        KC
Sbjct: 9   ITTMKPYCRVLTSCRNSSIFKFPSSKSNHFIADNSSKFQSKLIHSRRFHCCSAQILGKKC 68

Query: 238 LIDTNKITAPPIISNWGKIKVLFSCNNIGRGR-GNLVILNVASNVRQHSSSVE 393
            I++N+        NWG+I+V  SC+    GR G LVI NVAS+ R+HS+SVE
Sbjct: 69  GINSNRRAFRLSDPNWGQIRVYRSCSGAHGGRRGVLVISNVASDFRKHSTSVE 121


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