BLASTX nr result

ID: Coptis25_contig00031618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031618
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330901.1| predicted protein [Populus trichocarpa] gi|2...   112   7e-23
gb|ABK94024.1| unknown [Populus trichocarpa]                          112   7e-23
ref|XP_002285673.1| PREDICTED: uncharacterized protein LOC100251...   112   1e-22
ref|XP_002512204.1| conserved hypothetical protein [Ricinus comm...   108   1e-21
ref|XP_003595823.1| hypothetical protein MTR_2g062220 [Medicago ...   107   3e-21

>ref|XP_002330901.1| predicted protein [Populus trichocarpa] gi|222872723|gb|EEF09854.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  112 bits (280), Expect = 7e-23
 Identities = 55/129 (42%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
 Frame = +2

Query: 107 MASGYNSSSYTQSPPLPLHLCFFFVILLLFMGISWYINYESIFESVVDQXXXXXXXXXXX 286
           M + Y+SSSY   PPLP+HLCFF +ILL+F+G++WYI YE + E + DQ           
Sbjct: 1   MGNSYSSSSYNSHPPLPIHLCFFLLILLMFIGLTWYIKYEPVLEGMFDQGKLILMASPLL 60

Query: 287 XXXXXXXXSSGDRD---RVPFLFSLPRERESLHRAGGSPWXXXXXXXXXXXMISYQSAFH 457
                   S+ D     R+ +    P E++SLHRAGG+PW           +ISY S F 
Sbjct: 61  LLLLVHWFSNDDHQYGRRLSYYLPFP-EKDSLHRAGGTPWGVGFLLVFLFFLISYHSYFQ 119

Query: 458 ERWFPLLSK 484
           ERWFPLLS+
Sbjct: 120 ERWFPLLSR 128


>gb|ABK94024.1| unknown [Populus trichocarpa]
          Length = 133

 Score =  112 bits (280), Expect = 7e-23
 Identities = 57/127 (44%), Positives = 75/127 (59%), Gaps = 3/127 (2%)
 Frame = +2

Query: 113 SGYNSSSYTQSPPLPLHLCFFFVILLLFMGISWYINYESIFESVVDQXXXXXXXXXXXXX 292
           S  +SSSY+  PPLP+HLCFF +ILL+F+G+SWYINYE + ES++DQ             
Sbjct: 8   SSSSSSSYSSQPPLPVHLCFFLLILLMFVGLSWYINYEPVLESMLDQVKLFLSASPLLLL 67

Query: 293 XXXXXXSSGDR---DRVPFLFSLPRERESLHRAGGSPWXXXXXXXXXXXMISYQSAFHER 463
                 S+ D     ++     LP E++SLHRAGG+PW           +ISY S F ER
Sbjct: 68  LLVHLLSNDDHRYGRKLSHYIPLP-EKDSLHRAGGTPWGVGFLLVFLFFLISYHSYFQER 126

Query: 464 WFPLLSK 484
           WFPLLS+
Sbjct: 127 WFPLLSR 133


>ref|XP_002285673.1| PREDICTED: uncharacterized protein LOC100251830 [Vitis vinifera]
          Length = 126

 Score =  112 bits (279), Expect = 1e-22
 Identities = 57/124 (45%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
 Frame = +2

Query: 119 YNSSSYTQ--SPPLPLHLCFFFVILLLFMGISWYINYESIFESVVDQXXXXXXXXXXXXX 292
           Y++SSY Q  S  +PLHLCFF  IL  F+G +WYINYES+ E ++DQ             
Sbjct: 4   YDNSSYFQHLSLDIPLHLCFFLAILFSFVGFTWYINYESMIEDLMDQLKLVLILSPLLLL 63

Query: 293 XXXXXXSSGDRDRVPFLFSLPRERESLHRAGGSPWXXXXXXXXXXXMISYQSAFHERWFP 472
                 SS  R  +PF+  LP +++SLHRAGGSPW           M+SY+S F ERWFP
Sbjct: 64  LLLHILSSDQRQFIPFIIPLP-DKDSLHRAGGSPWGVAFLLVFLLFMVSYKSYFQERWFP 122

Query: 473 LLSK 484
           LLS+
Sbjct: 123 LLSR 126


>ref|XP_002512204.1| conserved hypothetical protein [Ricinus communis]
           gi|223548748|gb|EEF50238.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/126 (45%), Positives = 71/126 (56%)
 Frame = +2

Query: 107 MASGYNSSSYTQSPPLPLHLCFFFVILLLFMGISWYINYESIFESVVDQXXXXXXXXXXX 286
           MAS YNSSS  Q P LP+HLCFF +ILLL + +SWY NYE + ES+ DQ           
Sbjct: 1   MASSYNSSSQFQQP-LPIHLCFFLMILLLLLTLSWYTNYEPVLESMFDQVKLVLMVSPLL 59

Query: 287 XXXXXXXXSSGDRDRVPFLFSLPRERESLHRAGGSPWXXXXXXXXXXXMISYQSAFHERW 466
                    +     + +   LP E+ SLH+AGG+PW           MISYQS+F ERW
Sbjct: 60  LLMAVRWLPNDRNGGIAYFIPLP-EQGSLHKAGGTPWGVGFLLVFLFFMISYQSSFQERW 118

Query: 467 FPLLSK 484
           FPLLS+
Sbjct: 119 FPLLSR 124


>ref|XP_003595823.1| hypothetical protein MTR_2g062220 [Medicago truncatula]
           gi|124360113|gb|ABN08129.1| hypothetical protein
           MtrDRAFT_AC155880g29v2 [Medicago truncatula]
           gi|355484871|gb|AES66074.1| hypothetical protein
           MTR_2g062220 [Medicago truncatula]
           gi|388502640|gb|AFK39386.1| unknown [Medicago
           truncatula]
          Length = 121

 Score =  107 bits (266), Expect = 3e-21
 Identities = 56/121 (46%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
 Frame = +2

Query: 125 SSSYTQSPPLPLHLCFFFVILLLFMGISWYINYESIFESVVDQXXXXXXXXXXXXXXXXX 304
           +++    P LPLHLCFF + LL+F+G SWY NYE I ES++DQ                 
Sbjct: 2   ATTQNSQPALPLHLCFFLLTLLIFLGFSWYSNYEPIMESIMDQVKMVLMISPLLLLLVVH 61

Query: 305 XXSS-GDRDRVPFLFSLPRERESLHRAGGSPWXXXXXXXXXXXMISYQSAFHERWFPLLS 481
             S+ GD      L  LP ERESLHRAGG+PW           M+SYQS+F ERWFPLLS
Sbjct: 62  FLSNYGDGGFFSSLIPLP-ERESLHRAGGTPWGVGLFLVVLLFMVSYQSSFQERWFPLLS 120

Query: 482 K 484
           +
Sbjct: 121 R 121


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