BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031590
         (1137 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274735.1| PREDICTED: psbP domain-containing protein 2,...   242   1e-61
ref|XP_004147342.1| PREDICTED: psbP domain-containing protein 2,...   238   2e-60
ref|XP_002534226.1| conserved hypothetical protein [Ricinus comm...   238   3e-60
ref|XP_002309937.1| predicted protein [Populus trichocarpa] gi|2...   235   2e-59
ref|XP_003526877.1| PREDICTED: psbP domain-containing protein 2,...   233   5e-59

>ref|XP_002274735.1| PREDICTED: psbP domain-containing protein 2, chloroplastic [Vitis
           vinifera] gi|296082589|emb|CBI21594.3| unnamed protein
           product [Vitis vinifera]
          Length = 234

 Score =  242 bits (617), Expect = 1e-61
 Identities = 134/227 (59%), Positives = 156/227 (68%), Gaps = 7/227 (3%)
 Frame = +3

Query: 90  KPYSVSATLFSTTTVAA-------QLTPLQHSLTKREFNLSLFLGISNIAISLLFCTPST 248
           KP S   TLF      A       +  PL+  L+KR+ NLS+      +++ L    P+T
Sbjct: 11  KPSSPPKTLFPIPIPKALKPKTQPKWKPLECCLSKRDLNLSI------VSLLLAAALPNT 64

Query: 249 ALTTENEEQLVLKRYTDENAGFTLLIPSTWNKVDKAGATALFEEXXXXXXXXXXXXTPVR 428
                 +E    +RYTD   GFTLLIPS+W KVDK GAT LFEE            +PVR
Sbjct: 65  VFKVVAQELEEFQRYTDSVEGFTLLIPSSWIKVDKGGATVLFEEENKGVNNVGVVVSPVR 124

Query: 429 LNTLGDFGSPQFVADKLIQAEKRKESTKDAEVIGVAERSGHGGIQVYEFEYLLDSTRGGM 608
           L +L  FGSPQFVADK+IQAEKRKESTKDAE+IGVAERSG GG+QVYEFEY++DSTRGGM
Sbjct: 125 LESLKQFGSPQFVADKVIQAEKRKESTKDAELIGVAERSGQGGLQVYEFEYIVDSTRGGM 184

Query: 609 KRIFSAAFVASKKLYLLNIAHSDKPENPLDTSTKMTLEQVLHSFDTA 749
           KRIFSAAFV SKKLYLLNIAH DKPE+PLD+ T+  LEQVLHSFD A
Sbjct: 185 KRIFSAAFVNSKKLYLLNIAHIDKPESPLDSHTRTMLEQVLHSFDAA 231


>ref|XP_004147342.1| PREDICTED: psbP domain-containing protein 2, chloroplastic-like
           [Cucumis sativus] gi|449523543|ref|XP_004168783.1|
           PREDICTED: psbP domain-containing protein 2,
           chloroplastic-like [Cucumis sativus]
          Length = 357

 Score =  238 bits (607), Expect = 2e-60
 Identities = 128/205 (62%), Positives = 151/205 (73%), Gaps = 5/205 (2%)
 Frame = +3

Query: 150 PLQHSL----TKREFNLSLFLGISNIAISLLFCTPSTALTTEN-EEQLVLKRYTDENAGF 314
           PL+H      ++R  N+S+        +SL F   ST++++    E   L+RYTD   GF
Sbjct: 158 PLEHKFALVTSRRAMNVSI--------LSLFFYGFSTSISSAVFAEDFELERYTDSKEGF 209

Query: 315 TLLIPSTWNKVDKAGATALFEEXXXXXXXXXXXXTPVRLNTLGDFGSPQFVADKLIQAEK 494
           TLL PS+W KVDKAGAT LFEE             PVRL +LG+FG+PQFVADKLIQAEK
Sbjct: 210 TLLRPSSWVKVDKAGATVLFEEGNKGSNNVGVVVNPVRLTSLGEFGTPQFVADKLIQAEK 269

Query: 495 RKESTKDAEVIGVAERSGHGGIQVYEFEYLLDSTRGGMKRIFSAAFVASKKLYLLNIAHS 674
           RKESTKDA V+GVAERSG GG+QVYEFEY +DSTRGGMKRIFSAAFVASKKLY+LNI+HS
Sbjct: 270 RKESTKDAAVVGVAERSGEGGLQVYEFEYTVDSTRGGMKRIFSAAFVASKKLYILNISHS 329

Query: 675 DKPENPLDTSTKMTLEQVLHSFDTA 749
           DKPE+PLD+  +M LEQVLHSFD A
Sbjct: 330 DKPESPLDSQKRMMLEQVLHSFDAA 354


>ref|XP_002534226.1| conserved hypothetical protein [Ricinus communis]
           gi|223525676|gb|EEF28158.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 244

 Score =  238 bits (606), Expect = 3e-60
 Identities = 139/232 (59%), Positives = 159/232 (68%), Gaps = 10/232 (4%)
 Frame = +3

Query: 78  IQNQKPYSVSA---TLFSTTTVAAQLTP-------LQHSLTKREFNLSLFLGISNIAISL 227
           +QN  P SVS+   TL  + ++     P       L    +KR+  L+L     +I  SL
Sbjct: 16  VQNNGPKSVSSLPRTLLHSISLPRASCPNRKEAVILSFCWSKRKLILAL-----SINGSL 70

Query: 228 LFCTPSTALTTENEEQLVLKRYTDENAGFTLLIPSTWNKVDKAGATALFEEXXXXXXXXX 407
           L   P T L  E  E   L+RYTD   GFTLL PST+ KVDKAGAT LFEE         
Sbjct: 71  LNIIPDTILAIEMGE---LERYTDAKEGFTLLRPSTYVKVDKAGATVLFEEVNKGSNNIG 127

Query: 408 XXXTPVRLNTLGDFGSPQFVADKLIQAEKRKESTKDAEVIGVAERSGHGGIQVYEFEYLL 587
               PVRL TLG+FG+PQFVADKLIQAEKRKESTKD E+IGVAER GHGG+QVYEFEY +
Sbjct: 128 VVVNPVRLATLGEFGTPQFVADKLIQAEKRKESTKDVELIGVAERPGHGGLQVYEFEYRV 187

Query: 588 DSTRGGMKRIFSAAFVASKKLYLLNIAHSDKPENPLDTSTKMTLEQVLHSFD 743
           DSTRGG+KRIFSAAFVASKKLYLLNI HSDKPE+PLD  T+M LE+VLHSFD
Sbjct: 188 DSTRGGVKRIFSAAFVASKKLYLLNITHSDKPESPLDPHTRMMLEEVLHSFD 239


>ref|XP_002309937.1| predicted protein [Populus trichocarpa] gi|222852840|gb|EEE90387.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  235 bits (599), Expect = 2e-59
 Identities = 121/185 (65%), Positives = 144/185 (77%)
 Frame = +3

Query: 198 LGISNIAISLLFCTPSTALTTENEEQLVLKRYTDENAGFTLLIPSTWNKVDKAGATALFE 377
           L +S +A+ +    P+ +  +   ++L L RYTD   GFTLL PS++ KVDKAGAT LFE
Sbjct: 18  LNLSVLALLINGSLPNLSNNSILAQELELARYTDSKEGFTLLTPSSYVKVDKAGATVLFE 77

Query: 378 EXXXXXXXXXXXXTPVRLNTLGDFGSPQFVADKLIQAEKRKESTKDAEVIGVAERSGHGG 557
           E            TPVRL +L +FGSPQFVADKLIQAEK+KESTKDAEVI VAERSGHGG
Sbjct: 78  EVNKGSNNIGVVVTPVRLASLDEFGSPQFVADKLIQAEKKKESTKDAEVISVAERSGHGG 137

Query: 558 IQVYEFEYLLDSTRGGMKRIFSAAFVASKKLYLLNIAHSDKPENPLDTSTKMTLEQVLHS 737
           +QVYEFEY +DSTRGGMKRIFSAAFV+SKKLY+LNIAHSDKPE+PLDT T+  LE+V+HS
Sbjct: 138 LQVYEFEYKVDSTRGGMKRIFSAAFVSSKKLYILNIAHSDKPESPLDTDTRTILEEVIHS 197

Query: 738 FDTAS 752
           FD A+
Sbjct: 198 FDAAT 202


>ref|XP_003526877.1| PREDICTED: psbP domain-containing protein 2, chloroplastic-like
           [Glycine max]
          Length = 251

 Score =  233 bits (595), Expect = 5e-59
 Identities = 133/234 (56%), Positives = 154/234 (65%), Gaps = 10/234 (4%)
 Frame = +3

Query: 81  QNQKPYSVSATLFS-------TTTVAAQLTPLQH---SLTKREFNLSLFLGISNIAISLL 230
           Q Q  Y+ S TL S       + T   +     H   S +KR  NLS+ L        +L
Sbjct: 20  QTQSTYASSRTLVSILLPKCTSPTCIYESNKDMHLALSFSKRNLNLSILLTTFLWGEGVL 79

Query: 231 FCTPSTALTTENEEQLVLKRYTDENAGFTLLIPSTWNKVDKAGATALFEEXXXXXXXXXX 410
                 AL    E  L L+RYTD   GFTLL PS+W KVDKAGAT LF+E          
Sbjct: 80  MPNARDALLLAQE--LELQRYTDSEEGFTLLTPSSWTKVDKAGATVLFQEADMGSNNIGV 137

Query: 411 XXTPVRLNTLGDFGSPQFVADKLIQAEKRKESTKDAEVIGVAERSGHGGIQVYEFEYLLD 590
              PVRL TL +FG+PQFVADKL+QAE+RKESTK+AE+I VAERSG GG+Q+YEFEY +D
Sbjct: 138 VVNPVRLKTLEEFGTPQFVADKLLQAERRKESTKEAELITVAERSGEGGLQIYEFEYKVD 197

Query: 591 STRGGMKRIFSAAFVASKKLYLLNIAHSDKPENPLDTSTKMTLEQVLHSFDTAS 752
           STRGGMKRIFSAAFVASKKLYLLNI HSDKPE+PLD   +M LEQVLHSFD A+
Sbjct: 198 STRGGMKRIFSAAFVASKKLYLLNIVHSDKPESPLDPHKRMILEQVLHSFDAAA 251