BLASTX nr result

ID: Coptis25_contig00031588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031588
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516144.1| erecta, putative [Ricinus communis] gi|22354...   113   2e-23
ref|XP_002309461.1| leucine-rich repeat protein kinase [Populus ...   108   6e-22
ref|XP_002280069.1| PREDICTED: LRR receptor-like serine/threonin...   107   1e-21
emb|CAN74952.1| hypothetical protein VITISV_025649 [Vitis vinifera]   107   1e-21
ref|XP_003588942.1| LRR receptor-like serine/threonine-protein k...   104   6e-21

>ref|XP_002516144.1| erecta, putative [Ricinus communis] gi|223544630|gb|EEF46146.1|
            erecta, putative [Ricinus communis]
          Length = 980

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/84 (70%), Positives = 65/84 (77%), Gaps = 2/84 (2%)
 Frame = -1

Query: 474  KMQPCDRPTMHEVTRVLESLVPVITP-KPAMPLPLLP-SSTKVASYMEEYSNIKNPGMIN 301
            K QP DRPTMHEVTRVL SLVP  TP K  MP P  P  S KV+ YM+EY+N+K P M+N
Sbjct: 897  KRQPTDRPTMHEVTRVLGSLVPSTTPPKQCMPAPPAPIPSAKVSCYMDEYANLKTPHMVN 956

Query: 300  CTSMSTSDGQLFLKFGEVISQNTE 229
            C SMSTSD QLFLKFGEVISQN+E
Sbjct: 957  CPSMSTSDAQLFLKFGEVISQNSE 980


>ref|XP_002309461.1| leucine-rich repeat protein kinase [Populus trichocarpa]
           gi|222855437|gb|EEE92984.1| leucine-rich repeat protein
           kinase [Populus trichocarpa]
          Length = 349

 Score =  108 bits (269), Expect = 6e-22
 Identities = 57/88 (64%), Positives = 66/88 (75%), Gaps = 6/88 (6%)
 Frame = -1

Query: 474 KMQPCDRPTMHEVTRVLESLVPVITPK------PAMPLPLLPSSTKVASYMEEYSNIKNP 313
           K QP DRPTMHEVTRVL SLVP+ITP       P  PLP    S KV  Y++EY+NIK+P
Sbjct: 266 KRQPTDRPTMHEVTRVLGSLVPLITPPKQCTQAPPAPLP----SAKVPCYIDEYANIKSP 321

Query: 312 GMINCTSMSTSDGQLFLKFGEVISQNTE 229
            ++NC SMSTSD QLFLKFGEVISQN++
Sbjct: 322 HILNCPSMSTSDAQLFLKFGEVISQNSQ 349


>ref|XP_002280069.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase ERECTA
            [Vitis vinifera] gi|296081722|emb|CBI20727.3| unnamed
            protein product [Vitis vinifera]
          Length = 986

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 62/86 (72%), Gaps = 7/86 (8%)
 Frame = -1

Query: 474  KMQPCDRPTMHEVTRVLESLVPVITPK-------PAMPLPLLPSSTKVASYMEEYSNIKN 316
            K QP DRPTMHEVTRVL SLVP   PK       P  PLP    STKV  YM+EY+N+K 
Sbjct: 897  KKQPSDRPTMHEVTRVLGSLVPATAPKQIALTTTPPAPLP----STKVPCYMDEYANLKT 952

Query: 315  PGMINCTSMSTSDGQLFLKFGEVISQ 238
            P M+NC+SMSTSD QLFLKFGEVISQ
Sbjct: 953  PHMVNCSSMSTSDAQLFLKFGEVISQ 978


>emb|CAN74952.1| hypothetical protein VITISV_025649 [Vitis vinifera]
          Length = 756

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/86 (66%), Positives = 62/86 (72%), Gaps = 7/86 (8%)
 Frame = -1

Query: 474 KMQPCDRPTMHEVTRVLESLVPVITPK-------PAMPLPLLPSSTKVASYMEEYSNIKN 316
           K QP DRPTMHEVTRVL SLVP   PK       P  PLP    STKV  YM+EY+N+K 
Sbjct: 667 KKQPSDRPTMHEVTRVLGSLVPATAPKQIALTTTPPAPLP----STKVPCYMDEYANLKT 722

Query: 315 PGMINCTSMSTSDGQLFLKFGEVISQ 238
           P M+NC+SMSTSD QLFLKFGEVISQ
Sbjct: 723 PHMVNCSSMSTSDAQLFLKFGEVISQ 748


>ref|XP_003588942.1| LRR receptor-like serine/threonine-protein kinase ERECTA [Medicago
            truncatula] gi|355477990|gb|AES59193.1| LRR receptor-like
            serine/threonine-protein kinase ERECTA [Medicago
            truncatula]
          Length = 978

 Score =  104 bits (260), Expect = 6e-21
 Identities = 54/84 (64%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
 Frame = -1

Query: 474  KMQPCDRPTMHEVTRVLESLVPVITP-KPAMPL-PLLPSSTKVASYMEEYSNIKNPGMIN 301
            K QP DRPTMHEV+RVL SL+P + P K   PL P    S KV  YM+EY+N+K P ++N
Sbjct: 895  KRQPADRPTMHEVSRVLGSLMPSVAPAKQLTPLQPASHPSAKVPCYMDEYANLKTPHLVN 954

Query: 300  CTSMSTSDGQLFLKFGEVISQNTE 229
            C SMSTSD QLFLKFGEVISQN+E
Sbjct: 955  CPSMSTSDAQLFLKFGEVISQNSE 978


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