BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031564
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   265   2e-69
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              265   2e-69
ref|XP_002328726.1| predicted protein [Populus trichocarpa] gi|2...   261   5e-68
ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   259   1e-67
dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]        259   2e-67

>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
           vinifera]
          Length = 479

 Score =  265 bits (678), Expect = 2e-69
 Identities = 125/153 (81%), Positives = 135/153 (88%), Gaps = 1/153 (0%)
 Frame = -1

Query: 509 TEYRVLGPTINGCSWVELLPHTGRKHQLRVHCAEALGTPIVGDYKYGWYVHSKWKQMPRV 330
           TEYRVLGP INGCSW+EL P T RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMPRV
Sbjct: 327 TEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRV 386

Query: 329 DFEQTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFQEVLDGK-RQLDK 153
           D E TTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCREL+LPNIAKF  +LD K +  ++
Sbjct: 387 DLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQ 446

Query: 152 QSDLSSKPDLLRFVAPMPSHMKISWNLMSSYLV 54
              LS KPD+LRFVA MP+HMKISWNLMSSYLV
Sbjct: 447 YPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 479


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  265 bits (678), Expect = 2e-69
 Identities = 125/153 (81%), Positives = 135/153 (88%), Gaps = 1/153 (0%)
 Frame = -1

Query: 509 TEYRVLGPTINGCSWVELLPHTGRKHQLRVHCAEALGTPIVGDYKYGWYVHSKWKQMPRV 330
           TEYRVLGP INGCSW+EL P T RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMPRV
Sbjct: 329 TEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRV 388

Query: 329 DFEQTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFQEVLDGK-RQLDK 153
           D E TTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCREL+LPNIAKF  +LD K +  ++
Sbjct: 389 DLEPTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQ 448

Query: 152 QSDLSSKPDLLRFVAPMPSHMKISWNLMSSYLV 54
              LS KPD+LRFVA MP+HMKISWNLMSSYLV
Sbjct: 449 YPKLSLKPDILRFVASMPNHMKISWNLMSSYLV 481


>ref|XP_002328726.1| predicted protein [Populus trichocarpa] gi|222839024|gb|EEE77375.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  261 bits (666), Expect = 5e-68
 Identities = 122/152 (80%), Positives = 137/152 (90%)
 Frame = -1

Query: 509 TEYRVLGPTINGCSWVELLPHTGRKHQLRVHCAEALGTPIVGDYKYGWYVHSKWKQMPRV 330
           TEYRVLGPTINGCSW+EL P T RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMPRV
Sbjct: 27  TEYRVLGPTINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRV 86

Query: 329 DFEQTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFQEVLDGKRQLDKQ 150
           D E ++GKPYK+R PEG+D+QKGSVL+KVPLLHLHCRELVLPNIAKF +VLDGK + +  
Sbjct: 87  DIEPSSGKPYKLRWPEGVDIQKGSVLAKVPLLHLHCRELVLPNIAKFLDVLDGKSE-NVH 145

Query: 149 SDLSSKPDLLRFVAPMPSHMKISWNLMSSYLV 54
             LS++PDLLRFVA MPSHMKISWNLMSS+LV
Sbjct: 146 PALSTRPDLLRFVASMPSHMKISWNLMSSFLV 177


>ref|XP_003549365.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Glycine
           max]
          Length = 554

 Score =  259 bits (663), Expect = 1e-67
 Identities = 123/152 (80%), Positives = 134/152 (88%)
 Frame = -1

Query: 509 TEYRVLGPTINGCSWVELLPHTGRKHQLRVHCAEALGTPIVGDYKYGWYVHSKWKQMPRV 330
           TEYRVLGP INGCSWVEL P T RKHQLRVHCAEALGTPIVGDYKYGW+VHS+WKQMPRV
Sbjct: 404 TEYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRV 463

Query: 329 DFEQTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFQEVLDGKRQLDKQ 150
           D E TTGKPYK+RRPEGLDVQKGSVLSKVPLLHLHCRELVLPNI KF  VL+   + + +
Sbjct: 464 DIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMHVLNNSSE-ELR 522

Query: 149 SDLSSKPDLLRFVAPMPSHMKISWNLMSSYLV 54
           + L  +PD+LRFVA MPSHM+ISWNLMSSYLV
Sbjct: 523 TSLREQPDVLRFVATMPSHMRISWNLMSSYLV 554


>dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 326

 Score =  259 bits (661), Expect = 2e-67
 Identities = 121/152 (79%), Positives = 132/152 (86%)
 Frame = -1

Query: 509 TEYRVLGPTINGCSWVELLPHTGRKHQLRVHCAEALGTPIVGDYKYGWYVHSKWKQMPRV 330
           TEY+VLGP INGCSWVEL P T RKHQLRVHCAEALGTPIVGDYKYGW+VH +WKQMP+V
Sbjct: 175 TEYKVLGPKINGCSWVELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQV 234

Query: 329 DFEQTTGKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFQEVLDGKRQLDKQ 150
           D E TTGKPYK+RRPEGLDVQKGSVLSKVPLLHLHCRE+VLPNIAKF  V++ +      
Sbjct: 235 DIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFLHVMNQQETEPLH 294

Query: 149 SDLSSKPDLLRFVAPMPSHMKISWNLMSSYLV 54
           + +  KPDLLRFVA MPSHMKISWNLMSSYLV
Sbjct: 295 TGIIDKPDLLRFVASMPSHMKISWNLMSSYLV 326