BLASTX nr result

ID: Coptis25_contig00031532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031532
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331318.1| predicted protein [Populus trichocarpa] gi|2...   145   6e-33
ref|XP_002335029.1| predicted protein [Populus trichocarpa] gi|2...   145   6e-33
ref|NP_177980.2| NAD(H) kinase 3 [Arabidopsis thaliana] gi|75276...   127   1e-27
dbj|BAE99495.1| hypothetical protein [Arabidopsis thaliana]           126   3e-27
ref|XP_002887746.1| ATNADK-3/NADK3 kinase 3 [Arabidopsis lyrata ...   125   5e-27

>ref|XP_002331318.1| predicted protein [Populus trichocarpa] gi|222873901|gb|EEF11032.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  145 bits (365), Expect = 6e-33
 Identities = 67/104 (64%), Positives = 89/104 (85%), Gaps = 1/104 (0%)
 Frame = -2

Query: 553 MGRKRLLLLLKPFNVYPASRTNGISHVSNSKVLSFLDNRRKVHKDAIRFCENILRRKS-L 377
           M R+RLLL+LKPF+VY   ++NG S ++NS+   +LDNRRKVHKDAI FC++ILR+KS +
Sbjct: 1   MARRRLLLMLKPFDVYQFGQSNGGSSITNSQAFRYLDNRRKVHKDAINFCQDILRKKSNI 60

Query: 376 DWEPLLRNNLVQPIRDVEMVITIGGDGTLLQASHFMDDSILLVG 245
           DWEP+LR NL QPIR+ ++V+T+GGDGTLLQASHF+DDSI ++G
Sbjct: 61  DWEPILRTNLSQPIRNFDLVVTVGGDGTLLQASHFLDDSIPVLG 104


>ref|XP_002335029.1| predicted protein [Populus trichocarpa] gi|222832650|gb|EEE71127.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  145 bits (365), Expect = 6e-33
 Identities = 67/104 (64%), Positives = 89/104 (85%), Gaps = 1/104 (0%)
 Frame = -2

Query: 553 MGRKRLLLLLKPFNVYPASRTNGISHVSNSKVLSFLDNRRKVHKDAIRFCENILRRKS-L 377
           M R+RLLL+LKPF+VY   ++NG S ++NS+   +LDNRRKVHKDAI FC++ILR+KS +
Sbjct: 1   MARRRLLLMLKPFDVYQFGQSNGGSSITNSQAFRYLDNRRKVHKDAINFCQDILRKKSNI 60

Query: 376 DWEPLLRNNLVQPIRDVEMVITIGGDGTLLQASHFMDDSILLVG 245
           DWEP+LR NL QPIR+ ++V+T+GGDGTLLQASHF+DDSI ++G
Sbjct: 61  DWEPILRTNLSQPIRNFDLVVTVGGDGTLLQASHFLDDSIPVLG 104


>ref|NP_177980.2| NAD(H) kinase 3 [Arabidopsis thaliana]
           gi|75276303|sp|Q500Y9.1|NADHK_ARATH RecName: Full=NADH
           kinase; Short=AtNADK-3 gi|63025184|gb|AAY27065.1|
           At1g78590 [Arabidopsis thaliana]
           gi|193885167|gb|ACF28397.1| At1g78590 [Arabidopsis
           thaliana] gi|332198003|gb|AEE36124.1| NAD(H) kinase 3
           [Arabidopsis thaliana]
          Length = 317

 Score =  127 bits (320), Expect = 1e-27
 Identities = 58/103 (56%), Positives = 82/103 (79%)
 Frame = -2

Query: 553 MGRKRLLLLLKPFNVYPASRTNGISHVSNSKVLSFLDNRRKVHKDAIRFCENILRRKSLD 374
           M  ++LLLLLKP + YP  +T G S + N +VL +L++R KVHK+AI+FC+ IL +K ++
Sbjct: 1   MAIRKLLLLLKPIDPYPFLQTEGASLIKNPQVLQYLESRCKVHKNAIKFCQEILSKKPVE 60

Query: 373 WEPLLRNNLVQPIRDVEMVITIGGDGTLLQASHFMDDSILLVG 245
           W+P+ RN+L  PIRDV+MVIT+GGDGTLL ASHF+DDS+ ++G
Sbjct: 61  WKPISRNDLSHPIRDVDMVITVGGDGTLLHASHFIDDSVPVLG 103


>dbj|BAE99495.1| hypothetical protein [Arabidopsis thaliana]
          Length = 317

 Score =  126 bits (316), Expect = 3e-27
 Identities = 57/103 (55%), Positives = 82/103 (79%)
 Frame = -2

Query: 553 MGRKRLLLLLKPFNVYPASRTNGISHVSNSKVLSFLDNRRKVHKDAIRFCENILRRKSLD 374
           M  ++LLLLLKP + YP  +T G S + N +VL +L++R KVHK+AI+FC+ IL +K ++
Sbjct: 1   MAIRKLLLLLKPIDPYPFLQTEGASLIKNPQVLQYLESRCKVHKNAIKFCQEILSKKPVE 60

Query: 373 WEPLLRNNLVQPIRDVEMVITIGGDGTLLQASHFMDDSILLVG 245
           W+P+ RN+L  PIRDV+MVIT+GG+GTLL ASHF+DDS+ ++G
Sbjct: 61  WKPISRNDLSHPIRDVDMVITVGGEGTLLHASHFIDDSVPVLG 103


>ref|XP_002887746.1| ATNADK-3/NADK3 kinase 3 [Arabidopsis lyrata subsp. lyrata]
           gi|297333587|gb|EFH64005.1| ATNADK-3/NADK3 kinase 3
           [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score =  125 bits (314), Expect = 5e-27
 Identities = 57/103 (55%), Positives = 81/103 (78%)
 Frame = -2

Query: 553 MGRKRLLLLLKPFNVYPASRTNGISHVSNSKVLSFLDNRRKVHKDAIRFCENILRRKSLD 374
           M  ++LLLLLKP + YP  +T G S + N +VL +L++R KVH++AI FC+ IL +K ++
Sbjct: 1   MAIRKLLLLLKPIDPYPFLQTEGSSLIKNPQVLKYLESRCKVHRNAINFCQEILSKKPVE 60

Query: 373 WEPLLRNNLVQPIRDVEMVITIGGDGTLLQASHFMDDSILLVG 245
           W+P+ RN+L  PIRDV+MVIT+GGDGTLL ASHF+DDS+ ++G
Sbjct: 61  WKPISRNDLSHPIRDVDMVITVGGDGTLLHASHFIDDSVPVLG 103


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