BLASTX nr result

ID: Coptis25_contig00031523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031523
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171616.1| PREDICTED: 40S ribosomal protein S21-2-like ...   127   1e-27
ref|XP_004143089.1| PREDICTED: 40S ribosomal protein S21-2-like ...   127   1e-27
emb|CAN60816.1| hypothetical protein VITISV_033219 [Vitis vinifera]   126   2e-27
ref|XP_002283649.1| PREDICTED: 40S ribosomal protein S21 isoform...   125   3e-27
gb|AEC10964.1| 40S ribosomal protein s21e [Camellia sinensis]         125   4e-27

>ref|XP_004171616.1| PREDICTED: 40S ribosomal protein S21-2-like isoform 2 [Cucumis
           sativus]
          Length = 82

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/68 (86%), Positives = 67/68 (98%)
 Frame = +3

Query: 42  MQNEEGQQTDLYIPRKCSATNRLITSKDHASVQINVGHLNEHGMYTGKFSTFALCGYIRA 221
           MQNEEG+ T+LYIPRKCSATNRLITSKDHASVQIN+GHL+E+G+YTG+FSTFALCG+IRA
Sbjct: 1   MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60

Query: 222 QGDADSAL 245
           QGDADSAL
Sbjct: 61  QGDADSAL 68


>ref|XP_004143089.1| PREDICTED: 40S ribosomal protein S21-2-like [Cucumis sativus]
          Length = 82

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/68 (86%), Positives = 67/68 (98%)
 Frame = +3

Query: 42  MQNEEGQQTDLYIPRKCSATNRLITSKDHASVQINVGHLNEHGMYTGKFSTFALCGYIRA 221
           MQNEEG+ T+LYIPRKCSATNRLITSKDHASVQIN+GHL+E+G+YTG+FSTFALCG+IRA
Sbjct: 1   MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60

Query: 222 QGDADSAL 245
           QGDADSAL
Sbjct: 61  QGDADSAL 68


>emb|CAN60816.1| hypothetical protein VITISV_033219 [Vitis vinifera]
          Length = 82

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/68 (86%), Positives = 64/68 (94%)
 Frame = +3

Query: 42  MQNEEGQQTDLYIPRKCSATNRLITSKDHASVQINVGHLNEHGMYTGKFSTFALCGYIRA 221
           MQNEEGQ  DLYIPRKCSATNRLITSKDHASVQINVGHL+E G YTG+F+TFALCG++RA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITSKDHASVQINVGHLDESGTYTGQFTTFALCGFVRA 60

Query: 222 QGDADSAL 245
           QGDADSAL
Sbjct: 61  QGDADSAL 68


>ref|XP_002283649.1| PREDICTED: 40S ribosomal protein S21 isoform 1 [Vitis vinifera]
           gi|296089706|emb|CBI39525.3| unnamed protein product
           [Vitis vinifera]
          Length = 82

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/68 (85%), Positives = 64/68 (94%)
 Frame = +3

Query: 42  MQNEEGQQTDLYIPRKCSATNRLITSKDHASVQINVGHLNEHGMYTGKFSTFALCGYIRA 221
           MQNEEGQ  DLYIPRKCSATNRLITSKDHASVQIN+GHL+E G YTG+F+TFALCG++RA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITSKDHASVQINIGHLDESGTYTGQFTTFALCGFVRA 60

Query: 222 QGDADSAL 245
           QGDADSAL
Sbjct: 61  QGDADSAL 68


>gb|AEC10964.1| 40S ribosomal protein s21e [Camellia sinensis]
          Length = 82

 Score =  125 bits (314), Expect = 4e-27
 Identities = 57/68 (83%), Positives = 66/68 (97%)
 Frame = +3

Query: 42  MQNEEGQQTDLYIPRKCSATNRLITSKDHASVQINVGHLNEHGMYTGKFSTFALCGYIRA 221
           MQNEEGQ  DLYIPRKCSATNRLIT+KDHASVQINVGHL+E+G+YTG+F+TFALCG++RA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITAKDHASVQINVGHLDENGIYTGQFTTFALCGFVRA 60

Query: 222 QGDADSAL 245
           QGDADSA+
Sbjct: 61  QGDADSAV 68


Top