BLASTX nr result

ID: Coptis25_contig00031522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031522
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307934.1| predicted protein [Populus trichocarpa] gi|2...   271   8e-71
ref|XP_002322580.1| predicted protein [Populus trichocarpa] gi|2...   265   5e-69
emb|CBI32852.3| unnamed protein product [Vitis vinifera]              261   7e-68
ref|XP_002283757.1| PREDICTED: metacaspase-9 [Vitis vinifera]         261   7e-68
ref|XP_002517452.1| caspase, putative [Ricinus communis] gi|2235...   260   1e-67

>ref|XP_002307934.1| predicted protein [Populus trichocarpa] gi|222853910|gb|EEE91457.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score =  271 bits (692), Expect = 8e-71
 Identities = 132/205 (64%), Positives = 160/205 (78%), Gaps = 5/205 (2%)
 Frame = +2

Query: 2   RIAILVGCNYPNSPNELHGCINDVLSMHDTLASRFGFEPKNIEVLTDAPDSLVMPTGANI 181
           R+A+LVGCNYPN+ NELHGCINDVL+M + L  RFGF+ +++++LTDAP S+V+PTGANI
Sbjct: 7   RMAVLVGCNYPNTRNELHGCINDVLTMKEVLVKRFGFDLRSVQLLTDAPGSVVLPTGANI 66

Query: 182 MKALNRMIDQAEPGDVLYFHYSGHGTRLPS---KHGIWHDEAIVPCDMNLITDVDFRRLV 352
            KAL+ MIDQAE GDVL+FHYSGHGTR+PS    H   HDEAIVPCD NLITDVDFR+LV
Sbjct: 67  KKALSHMIDQAEAGDVLFFHYSGHGTRIPSVKRGHPFRHDEAIVPCDFNLITDVDFRQLV 126

Query: 353 NRLPEKSSFTIISDSCHSGGLIDKEKEQIGP--XXXXXXXXXXXXCPKTIPIDNILDHLT 526
           NRLP+ +S T++SDSCHSGGLIDKEKEQIGP               PK IP ++IL HLT
Sbjct: 127 NRLPKGASLTVLSDSCHSGGLIDKEKEQIGPKATITTNNAKVPSQSPKVIPFESILQHLT 186

Query: 527 SLSGIQSPDIGAHLSQIFGNEASTK 601
           SL+ I + DIG HL + FG++AS K
Sbjct: 187 SLTNINTSDIGTHLLEFFGSDASLK 211


>ref|XP_002322580.1| predicted protein [Populus trichocarpa] gi|222867210|gb|EEF04341.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score =  265 bits (677), Expect = 5e-69
 Identities = 129/205 (62%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
 Frame = +2

Query: 2   RIAILVGCNYPNSPNELHGCINDVLSMHDTLASRFGFEPKNIEVLTDAPDSLVMPTGANI 181
           R+A+LVGCNYPN+ NELHGCINDVL+M + L  RFGF+  ++++LTDAP S+V+PTGANI
Sbjct: 7   RMAVLVGCNYPNTQNELHGCINDVLAMKEVLVKRFGFDASHVQLLTDAPGSVVLPTGANI 66

Query: 182 MKALNRMIDQAEPGDVLYFHYSGHGTRLPSK---HGIWHDEAIVPCDMNLITDVDFRRLV 352
            +AL  MIDQAE GDVL+FHYSGHGT +PS    H    DEAIVPCD NLITDVDFR+LV
Sbjct: 67  KRALGHMIDQAEAGDVLFFHYSGHGTWIPSNKPGHAFRQDEAIVPCDFNLITDVDFRQLV 126

Query: 353 NRLPEKSSFTIISDSCHSGGLIDKEKEQIGPXXXXXXXXXXXXC--PKTIPIDNILDHLT 526
           NRLP+ +S TI+SDSCHSGGLIDKEKEQIGP               PK IP ++IL HLT
Sbjct: 127 NRLPKGASLTILSDSCHSGGLIDKEKEQIGPNATITANNTAVHSHNPKAIPFESILQHLT 186

Query: 527 SLSGIQSPDIGAHLSQIFGNEASTK 601
           SL+ I + D+G HL + FG++AS K
Sbjct: 187 SLTNINTSDVGTHLLEFFGSDASLK 211


>emb|CBI32852.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  261 bits (667), Expect = 7e-68
 Identities = 129/204 (63%), Positives = 157/204 (76%), Gaps = 4/204 (1%)
 Frame = +2

Query: 2   RIAILVGCNYPNSPNELHGCINDVLSMHDTLASRFGFEPKNIEVLTDAPDSLVMPTGANI 181
           R+A+LVGCNY N+ NELHGCINDVL+M +TL +RFGF+  ++E+LTD P SLVMPTGANI
Sbjct: 7   RMAVLVGCNYHNTRNELHGCINDVLTMRETLVTRFGFQLSHVELLTDEPGSLVMPTGANI 66

Query: 182 MKALNRMIDQAEPGDVLYFHYSGHGTRLPS---KHGIWHDEAIVPCDMNLITDVDFRRLV 352
            KAL+RM+DQAEPGDVL+FHYSGHGT++PS    H    DEAIVPCD NLITD+DFR+LV
Sbjct: 67  KKALDRMVDQAEPGDVLFFHYSGHGTKIPSVKPHHPFSQDEAIVPCDFNLITDIDFRQLV 126

Query: 353 NRLPEKSSFTIISDSCHSGGLIDKEKEQIGP-XXXXXXXXXXXXCPKTIPIDNILDHLTS 529
           +R+P+ ++FTI+SDSCHSGGLIDKEKEQIGP              PK IP + I  HL+S
Sbjct: 127 DRIPKGANFTILSDSCHSGGLIDKEKEQIGPSSVNFTSTTFPSQKPKMIPFEAIQQHLSS 186

Query: 530 LSGIQSPDIGAHLSQIFGNEASTK 601
           L+ I + DIG HL   FG +AS K
Sbjct: 187 LTSINTSDIGTHLLVHFGGDASLK 210


>ref|XP_002283757.1| PREDICTED: metacaspase-9 [Vitis vinifera]
          Length = 316

 Score =  261 bits (667), Expect = 7e-68
 Identities = 129/204 (63%), Positives = 157/204 (76%), Gaps = 4/204 (1%)
 Frame = +2

Query: 2   RIAILVGCNYPNSPNELHGCINDVLSMHDTLASRFGFEPKNIEVLTDAPDSLVMPTGANI 181
           R+A+LVGCNY N+ NELHGCINDVL+M +TL +RFGF+  ++E+LTD P SLVMPTGANI
Sbjct: 7   RMAVLVGCNYHNTRNELHGCINDVLTMRETLVTRFGFQLSHVELLTDEPGSLVMPTGANI 66

Query: 182 MKALNRMIDQAEPGDVLYFHYSGHGTRLPS---KHGIWHDEAIVPCDMNLITDVDFRRLV 352
            KAL+RM+DQAEPGDVL+FHYSGHGT++PS    H    DEAIVPCD NLITD+DFR+LV
Sbjct: 67  KKALDRMVDQAEPGDVLFFHYSGHGTKIPSVKPHHPFSQDEAIVPCDFNLITDIDFRQLV 126

Query: 353 NRLPEKSSFTIISDSCHSGGLIDKEKEQIGP-XXXXXXXXXXXXCPKTIPIDNILDHLTS 529
           +R+P+ ++FTI+SDSCHSGGLIDKEKEQIGP              PK IP + I  HL+S
Sbjct: 127 DRIPKGANFTILSDSCHSGGLIDKEKEQIGPSSVNFTSTTFPSQKPKMIPFEAIQQHLSS 186

Query: 530 LSGIQSPDIGAHLSQIFGNEASTK 601
           L+ I + DIG HL   FG +AS K
Sbjct: 187 LTSINTSDIGTHLLVHFGGDASLK 210


>ref|XP_002517452.1| caspase, putative [Ricinus communis] gi|223543463|gb|EEF44994.1|
           caspase, putative [Ricinus communis]
          Length = 325

 Score =  260 bits (664), Expect = 1e-67
 Identities = 133/210 (63%), Positives = 157/210 (74%), Gaps = 10/210 (4%)
 Frame = +2

Query: 2   RIAILVGCNYPNSPNELHGCINDVLSMHDTLASRFGFEPKNIEVLTDAP---DSLVMPTG 172
           R+A+LVGCNYPNS NELHGCINDV++M D L  RFGF+  +IE+LTDAP    S +MPTG
Sbjct: 7   RMAVLVGCNYPNSRNELHGCINDVVTMRDVLVKRFGFDLSHIELLTDAPAPGSSQIMPTG 66

Query: 173 ANIMKALNRMIDQAEPGDVLYFHYSGHGTRLPSK---HGIWHDEAIVPCDMNLITDVDFR 343
           ANI KAL++M+ +AE GDVL FHYSGHGT++PSK   H    DEAIVPCD NLITDVDFR
Sbjct: 67  ANIKKALDQMVGKAESGDVLLFHYSGHGTKIPSKRPGHPFRQDEAIVPCDFNLITDVDFR 126

Query: 344 RLVNRLPEKSSFTIISDSCHSGGLIDKEKEQIGP----XXXXXXXXXXXXCPKTIPIDNI 511
           +LVNRLP+ +SFTIISDSCHSGGLIDKEKEQIGP                 PK IP ++I
Sbjct: 127 QLVNRLPKGTSFTIISDSCHSGGLIDKEKEQIGPNSTITANAENLSSHIHTPKHIPFNSI 186

Query: 512 LDHLTSLSGIQSPDIGAHLSQIFGNEASTK 601
           L H +SL+GI + DIG HL + FG +AS K
Sbjct: 187 LQHFSSLTGINTSDIGTHLLEYFGADASLK 216


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