BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031497
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15771.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containi...   127   7e-28
ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group] g...   108   6e-22
gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japo...   108   6e-22
ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21

>emb|CBI15771.3| unnamed protein product [Vitis vinifera]
          Length = 436

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/88 (70%), Positives = 72/88 (81%)
 Frame = +3

Query: 3   PIEPDVVIWRSLLFCSRTNSNVELAELAAKRISEFESRKCGAQVLLSNVYAAASR*NDVK 182
           PI+PDVVIWRSLLF  R + N+ELAE AAK+I E E R+CGA+VLLSNVYA+ASR  DVK
Sbjct: 309 PIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVK 368

Query: 183 MVRKGMGSHGIRKQPGCSFVEINGAVHE 266
            VRK M +  I+KQPGCSFVEI+G VHE
Sbjct: 369 RVRKDMATQRIKKQPGCSFVEIDGLVHE 396


>ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 624

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/88 (70%), Positives = 72/88 (81%)
 Frame = +3

Query: 3   PIEPDVVIWRSLLFCSRTNSNVELAELAAKRISEFESRKCGAQVLLSNVYAAASR*NDVK 182
           PI+PDVVIWRSLLF  R + N+ELAE AAK+I E E R+CGA+VLLSNVYA+ASR  DVK
Sbjct: 497 PIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVK 556

Query: 183 MVRKGMGSHGIRKQPGCSFVEINGAVHE 266
            VRK M +  I+KQPGCSFVEI+G VHE
Sbjct: 557 RVRKDMATQRIKKQPGCSFVEIDGLVHE 584


>ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
           gi|50725675|dbj|BAD33141.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza
           sativa Japonica Group] gi|215697775|dbj|BAG91968.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 581

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/89 (56%), Positives = 63/89 (70%)
 Frame = +3

Query: 3   PIEPDVVIWRSLLFCSRTNSNVELAELAAKRISEFESRKCGAQVLLSNVYAAASR*NDVK 182
           P+ PDVV+WRSLLF  R +  V LAE AA+RI + E ++CG  VLLSNVYA   R  DV 
Sbjct: 462 PVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVN 521

Query: 183 MVRKGMGSHGIRKQPGCSFVEINGAVHEF 269
            VR GMG+    K+PGCSF+E++G +HEF
Sbjct: 522 NVRTGMGNSRTSKKPGCSFIEVDGCIHEF 550


>gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
          Length = 493

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/89 (56%), Positives = 63/89 (70%)
 Frame = +3

Query: 3   PIEPDVVIWRSLLFCSRTNSNVELAELAAKRISEFESRKCGAQVLLSNVYAAASR*NDVK 182
           P+ PDVV+WRSLLF  R +  V LAE AA+RI + E ++CG  VLLSNVYA   R  DV 
Sbjct: 374 PVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLRWVDVN 433

Query: 183 MVRKGMGSHGIRKQPGCSFVEINGAVHEF 269
            VR GMG+    K+PGCSF+E++G +HEF
Sbjct: 434 NVRTGMGNSRTSKKPGCSFIEVDGCIHEF 462


>ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Brachypodium distachyon]
          Length = 613

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/89 (57%), Positives = 58/89 (65%)
 Frame = +3

Query: 3   PIEPDVVIWRSLLFCSRTNSNVELAELAAKRISEFESRKCGAQVLLSNVYAAASR*NDVK 182
           PI PDV IWRSLLF  R    V LAE  A+R+ E E  +CG  VLLSNVYA  SR  DV 
Sbjct: 496 PIAPDVAIWRSLLFACRARGEVGLAEYVAERVEELEPSRCGGNVLLSNVYATTSRWVDVN 555

Query: 183 MVRKGMGSHGIRKQPGCSFVEINGAVHEF 269
            VR GMG   + K+PGCS +E+NG  HEF
Sbjct: 556 KVRTGMGRSRVSKRPGCSVIEVNGCAHEF 584