BLASTX nr result

ID: Coptis25_contig00031490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031490
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    54   3e-10
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    45   6e-10
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    45   1e-09
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    44   7e-07
ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    40   1e-06

>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 53.9 bits (128), Expect(2) = 3e-10
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = +1

Query: 415  SVLHQELLGVLQGLKGVAAMNIMRLEV--QADSVRVVKMLTKKEDPPWYCCNLVA*ILVE 588
            S+L  E +G+L+G+KG  ++     ++  + D++ V+  ++     PW   N++      
Sbjct: 1272 SILMAEAMGLLEGIKGAISLQNWSRKIIFEGDNIAVINAMSPSATGPWTIANIILDAGAL 1331

Query: 589  LRKFEEVNFKHVLREGNQVADYMS 660
            L  F+EV F+H  RE N++AD+M+
Sbjct: 1332 LGHFQEVKFQHCYREANRLADFMA 1355



 Score = 37.0 bits (84), Expect(2) = 3e-10
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 264  REEK*VKWEKPTTDVPTLNTDGS-LQNGRVGYGGALRNWNGD 386
            R  K + W  P  DV  +N DGS L NG+  YG  +RN NG+
Sbjct: 1217 RSGKNLIWSPPNEDVLKVNFDGSKLDNGQAAYGFVIRNSNGE 1258


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 45.1 bits (105), Expect(2) = 6e-10
 Identities = 26/85 (30%), Positives = 46/85 (54%)
 Frame = +1

Query: 430 ELLGVLQGLKGVAAMNIMRLEVQADSVRVVKMLTKKEDPPWYCCNLVA*ILVELRKFEEV 609
           EL  + +GL   + + I  + V++DS+ VVK + +K+       + +  I V L KFE+ 
Sbjct: 206 ELWAIWRGLVLASGLGIKAIWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKY 265

Query: 610 NFKHVLREGNQVADYMSKLHTTDLD 684
              H  RE N+ AD++S++  +  D
Sbjct: 266 RVSHTWRETNKAADFLSRMDLSGSD 290



 Score = 44.7 bits (104), Expect(2) = 6e-10
 Identities = 23/62 (37%), Positives = 32/62 (51%)
 Frame = +3

Query: 207 DGATRMVLTRLGIVVSFKQREEK*VKWEKPTTDVPTLNTDGSLQNGRVGYGGALRNWNGD 386
           +G   + L RL   ++   R  +   WEKP      LNTDGS+  G  G+GG  R+ NGD
Sbjct: 129 NGIALLNLERLHNFLTPVARSIRWYSWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGD 188

Query: 387 GV 392
            +
Sbjct: 189 PI 190


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 44.7 bits (104), Expect(2) = 1e-09
 Identities = 23/62 (37%), Positives = 32/62 (51%)
 Frame = +3

Query: 207 DGATRMVLTRLGIVVSFKQREEK*VKWEKPTTDVPTLNTDGSLQNGRVGYGGALRNWNGD 386
           +G   + L RL   ++   R  +   WEKP      LNTDGS+  G  G+GG  R+ NGD
Sbjct: 242 NGIALLNLERLHNFLTPVARSIRWYSWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGD 301

Query: 387 GV 392
            +
Sbjct: 302 PI 303



 Score = 43.9 bits (102), Expect(2) = 1e-09
 Identities = 26/85 (30%), Positives = 45/85 (52%)
 Frame = +1

Query: 430 ELLGVLQGLKGVAAMNIMRLEVQADSVRVVKMLTKKEDPPWYCCNLVA*ILVELRKFEEV 609
           EL  + +GL   + + I  + V++DS+  VK + +K+       + +  I V L KFE+ 
Sbjct: 319 ELWAIWRGLVLASGLGIKAIWVESDSMSAVKTINRKQPYSSRAGSCLNHIWVLLEKFEKY 378

Query: 610 NFKHVLREGNQVADYMSKLHTTDLD 684
              H  RE N+ AD++SK+  +  D
Sbjct: 379 LVSHTWRETNKAADFLSKMDLSGND 403


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 43.5 bits (101), Expect(2) = 7e-07
 Identities = 25/79 (31%), Positives = 40/79 (50%)
 Frame = +1

Query: 430 ELLGVLQGLKGVAAMNIMRLEVQADSVRVVKMLTKKEDPPWYCCNLVA*ILVELRKFEEV 609
           EL  + +GL     + I  + V++DS+  VK + + +         +  I   L+KFEE 
Sbjct: 325 ELWAIWRGLVLALGLGIKVIWVESDSMSAVKTINRVQSHSGKANRCLNHIWALLKKFEEY 384

Query: 610 NFKHVLREGNQVADYMSKL 666
              H  RE N+ ADY+SK+
Sbjct: 385 KVSHAWRETNKAADYLSKM 403



 Score = 35.8 bits (81), Expect(2) = 7e-07
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 285 WEKPTTDVPTLNTDGSLQNGRVGYGGALRNWNGDGV 392
           W+KP      LNTDGS+     G+GG LR+  G+ +
Sbjct: 274 WKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAI 309


>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 40.4 bits (93), Expect(2) = 1e-06
 Identities = 22/78 (28%), Positives = 40/78 (51%)
 Frame = +3

Query: 159 NNMRVYIGKSLDKVKEDGATRMVLTRLGIVVSFKQREEK*VKWEKPTTDVPTLNTDGSLQ 338
           N +RV    +  ++K     R  L ++  +++   R  +  +W KP      LNTDGS+ 
Sbjct: 267 NELRVEFSSTQKRIKGMVLLRN-LNQIASILNPVSRSIRWCEWTKPEFGWTKLNTDGSIH 325

Query: 339 NGRVGYGGALRNWNGDGV 392
           +  V +GG LR++ G+ +
Sbjct: 326 SNTVSFGGLLRDYRGEPI 343



 Score = 38.1 bits (87), Expect(2) = 1e-06
 Identities = 25/92 (27%), Positives = 47/92 (51%)
 Frame = +1

Query: 391 FTGTSKKLSVLHQELLGVLQGLKGVAAMNIMRLEVQADSVRVVKMLTKKEDPPWYCCNLV 570
           F   + +  V   EL  + +GL     + I  + V++DS+ VV+ + +K+  P      +
Sbjct: 346 FVSKAPQGDVFLAELWAIWRGLVLSLGLGIKAIWVESDSMSVVRTVNRKQLCP-KAVGYL 404

Query: 571 A*ILVELRKFEEVNFKHVLREGNQVADYMSKL 666
             I   L+KF++    H  RE N+ AD+++K+
Sbjct: 405 NQIWKLLKKFDKYQISHSWRETNRAADHLAKM 436


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