BLASTX nr result

ID: Coptis25_contig00031483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031483
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523566.1| conserved hypothetical protein [Ricinus comm...    96   4e-18
ref|XP_003632511.1| PREDICTED: fimbrin [Vitis vinifera] gi|14777...    94   9e-18
ref|XP_002310149.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002454597.1| hypothetical protein SORBIDRAFT_04g034056 [S...    87   1e-15
ref|XP_002438042.1| hypothetical protein SORBIDRAFT_10g007165 [S...    87   2e-15

>ref|XP_002523566.1| conserved hypothetical protein [Ricinus communis]
           gi|223537128|gb|EEF38761.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 95

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 41/77 (53%), Positives = 57/77 (74%)
 Frame = +1

Query: 64  MAIMSRCIPMAPEHEMSVEEFKAWIARFDLDHDDNISREELEQALHSLHTWFAWWKARKG 243
           MAIM  C+ + P H+MSV EFKAW+ +FD+DHD  +SRE+L++AL S+  WFAWWK+R+ 
Sbjct: 1   MAIMC-CVQVQPSHDMSVNEFKAWLRQFDIDHDGRLSREDLKEALQSMSIWFAWWKSRQA 59

Query: 244 VKKSDINRNRQIDTTSE 294
           +K+ D +RN  ID   E
Sbjct: 60  MKEVDTDRNGLIDNPKE 76


>ref|XP_003632511.1| PREDICTED: fimbrin [Vitis vinifera] gi|147776200|emb|CAN61147.1|
           hypothetical protein VITISV_029170 [Vitis vinifera]
          Length = 97

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/81 (56%), Positives = 60/81 (74%)
 Frame = +1

Query: 64  MAIMSRCIPMAPEHEMSVEEFKAWIARFDLDHDDNISREELEQALHSLHTWFAWWKARKG 243
           MAIM  CI   P  EM+V+EFKAW+ RFD D D  ISREEL++AL SL  WF WWKAR+G
Sbjct: 1   MAIMC-CIQAHPSAEMTVDEFKAWLRRFDSDRDGKISREELQEALCSLQVWFGWWKARQG 59

Query: 244 VKKSDINRNRQIDTTSEEMDK 306
           +K++D + + +ID T +EM+K
Sbjct: 60  MKEADTDHSGRIDNT-KEMEK 79


>ref|XP_002310149.1| predicted protein [Populus trichocarpa] gi|222853052|gb|EEE90599.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/81 (49%), Positives = 58/81 (71%)
 Frame = +1

Query: 64  MAIMSRCIPMAPEHEMSVEEFKAWIARFDLDHDDNISREELEQALHSLHTWFAWWKARKG 243
           MAIM  C  + P  EM+VE+FKAW+ +F++D+D  +S EEL++A+ SL  WF WWKAR+ 
Sbjct: 1   MAIMC-CFQLNPNREMTVEDFKAWLRQFEMDNDGRVSHEELKEAIQSLRVWFPWWKARQV 59

Query: 244 VKKSDINRNRQIDTTSEEMDK 306
           +K +D N N QI+   EE++K
Sbjct: 60  MKVADTNHNGQIEGV-EEIEK 79


>ref|XP_002454597.1| hypothetical protein SORBIDRAFT_04g034056 [Sorghum bicolor]
           gi|241934428|gb|EES07573.1| hypothetical protein
           SORBIDRAFT_04g034056 [Sorghum bicolor]
          Length = 97

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 37/62 (59%), Positives = 48/62 (77%)
 Frame = +1

Query: 97  PEHEMSVEEFKAWIARFDLDHDDNISREELEQALHSLHTWFAWWKARKGVKKSDINRNRQ 276
           PE E +VEEF+AW+++FD D D  ISR+ELEQAL SL+ WF WWKAR+ V+ +D NRN  
Sbjct: 11  PEGETTVEEFRAWLSQFDADGDGRISRDELEQALRSLNLWFVWWKAREAVRAADANRNGA 70

Query: 277 ID 282
           +D
Sbjct: 71  VD 72


>ref|XP_002438042.1| hypothetical protein SORBIDRAFT_10g007165 [Sorghum bicolor]
           gi|241916265|gb|EER89409.1| hypothetical protein
           SORBIDRAFT_10g007165 [Sorghum bicolor]
          Length = 127

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 37/66 (56%), Positives = 49/66 (74%)
 Frame = +1

Query: 97  PEHEMSVEEFKAWIARFDLDHDDNISREELEQALHSLHTWFAWWKARKGVKKSDINRNRQ 276
           P+ E++VEEF+AW+A+FD D D  ISREEL+ AL SL+ WFAWWKAR GV+ +D NR+  
Sbjct: 39  PQGELTVEEFRAWLAQFDADRDGRISREELQHALRSLNVWFAWWKARDGVRAADANRDGG 98

Query: 277 IDTTSE 294
           +    E
Sbjct: 99  VQGDDE 104


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