BLASTX nr result
ID: Coptis25_contig00031482
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00031482 (398 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro... 92 3e-17 ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2... 76 3e-12 ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm... 74 2e-11 ref|NP_181342.1| uncharacterized protein [Arabidopsis thaliana] ... 72 4e-11 dbj|BAC43575.1| unknown protein [Arabidopsis thaliana] 72 4e-11 >ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis vinifera] Length = 663 Score = 92.4 bits (228), Expect = 3e-17 Identities = 56/97 (57%), Positives = 67/97 (69%), Gaps = 13/97 (13%) Frame = +2 Query: 65 KGASSSGFLPELRRCKSFSGGRNESVLSL-EPKRKSCDVRVRNTLWSLFNLDDERKGCLT 241 K +SSS F PELRR KSFS + E + EP+RKSCDVRVRNTLW+LFNLDDERKG Sbjct: 91 KPSSSSSFFPELRRTKSFSASKGEGFSGVVEPQRKSCDVRVRNTLWTLFNLDDERKGSKR 150 Query: 242 DK--EIE-ETRDL-------PVIQLKEED--EDEIRV 316 + E++ +TR+L PV + KEED EDEIRV Sbjct: 151 EAWGEVDVDTRNLGSSCVGGPVFESKEEDETEDEIRV 187 >ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1| predicted protein [Populus trichocarpa] Length = 628 Score = 75.9 bits (185), Expect = 3e-12 Identities = 50/112 (44%), Positives = 60/112 (53%), Gaps = 26/112 (23%) Frame = +2 Query: 50 IKSIFK-----------GASSSGFLPELRRCKSFSGGRNESVLSL-EPKRKSCDVRVRNT 193 +K+IFK +S S F PELRR KSFS +NE + EP+RKSCDVRVRNT Sbjct: 65 LKAIFKPPQPSSSNNNNNSSKSSFFPELRRTKSFSASKNEGFSGVFEPQRKSCDVRVRNT 124 Query: 194 LWSLFNLDDERKGCLTDK------EIEETRDL--------PVIQLKEEDEDE 307 LWSLFN D ER + + EIE PV + KEE+E E Sbjct: 125 LWSLFNQDSERNPSVKKEPFKGGPEIEAVEPRISCSSVRGPVFESKEEEEIE 176 >ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis] gi|223525005|gb|EEF27813.1| conserved hypothetical protein [Ricinus communis] Length = 676 Score = 73.6 bits (179), Expect = 2e-11 Identities = 49/102 (48%), Positives = 60/102 (58%), Gaps = 17/102 (16%) Frame = +2 Query: 50 IKSIFKGASSS--GFLPELRRCKSFSGGRNESVLSL-EPKRKSCDVRVRNTLWSLFNLDD 220 +K+IFK +SS F PELRR KSFS +NE + EP+RKSCDVRVR+TLWSLF DD Sbjct: 76 LKAIFKPSSSDRPSFFPELRRTKSFSASKNEGFSGVFEPQRKSCDVRVRSTLWSLFYQDD 135 Query: 221 E-----RKGCLTDKEIEE---------TRDLPVIQLKEEDED 304 E +K L EI E R P++ +EED D Sbjct: 136 EQRNPSKKDSLKGPEIIEVESRISSSSVRGGPIV-FEEEDSD 176 >ref|NP_181342.1| uncharacterized protein [Arabidopsis thaliana] gi|330254392|gb|AEC09486.1| uncharacterized protein [Arabidopsis thaliana] Length = 619 Score = 72.4 bits (176), Expect = 4e-11 Identities = 39/61 (63%), Positives = 48/61 (78%), Gaps = 3/61 (4%) Frame = +2 Query: 50 IKSIFKGASSSG-FLPELRRCKSFSGGRNE--SVLSLEPKRKSCDVRVRNTLWSLFNLDD 220 +K+IFK +SSSG F PELRR KSFS + E S+ + EP+R+SCDVRVRNTLWSLF+ D Sbjct: 85 LKAIFKPSSSSGSFFPELRRTKSFSASKAEAFSLGAFEPQRRSCDVRVRNTLWSLFHEDA 144 Query: 221 E 223 E Sbjct: 145 E 145 >dbj|BAC43575.1| unknown protein [Arabidopsis thaliana] Length = 619 Score = 72.4 bits (176), Expect = 4e-11 Identities = 39/61 (63%), Positives = 48/61 (78%), Gaps = 3/61 (4%) Frame = +2 Query: 50 IKSIFKGASSSG-FLPELRRCKSFSGGRNE--SVLSLEPKRKSCDVRVRNTLWSLFNLDD 220 +K+IFK +SSSG F PELRR KSFS + E S+ + EP+R+SCDVRVRNTLWSLF+ D Sbjct: 85 LKAIFKPSSSSGSFFPELRRTKSFSASKAEAFSLGAFEPQRRSCDVRVRNTLWSLFHEDA 144 Query: 221 E 223 E Sbjct: 145 E 145