BLASTX nr result

ID: Coptis25_contig00031482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031482
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro...    92   3e-17
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm...    74   2e-11
ref|NP_181342.1| uncharacterized protein [Arabidopsis thaliana] ...    72   4e-11
dbj|BAC43575.1| unknown protein [Arabidopsis thaliana]                 72   4e-11

>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
           vinifera]
          Length = 663

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 56/97 (57%), Positives = 67/97 (69%), Gaps = 13/97 (13%)
 Frame = +2

Query: 65  KGASSSGFLPELRRCKSFSGGRNESVLSL-EPKRKSCDVRVRNTLWSLFNLDDERKGCLT 241
           K +SSS F PELRR KSFS  + E    + EP+RKSCDVRVRNTLW+LFNLDDERKG   
Sbjct: 91  KPSSSSSFFPELRRTKSFSASKGEGFSGVVEPQRKSCDVRVRNTLWTLFNLDDERKGSKR 150

Query: 242 DK--EIE-ETRDL-------PVIQLKEED--EDEIRV 316
           +   E++ +TR+L       PV + KEED  EDEIRV
Sbjct: 151 EAWGEVDVDTRNLGSSCVGGPVFESKEEDETEDEIRV 187


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 50/112 (44%), Positives = 60/112 (53%), Gaps = 26/112 (23%)
 Frame = +2

Query: 50  IKSIFK-----------GASSSGFLPELRRCKSFSGGRNESVLSL-EPKRKSCDVRVRNT 193
           +K+IFK            +S S F PELRR KSFS  +NE    + EP+RKSCDVRVRNT
Sbjct: 65  LKAIFKPPQPSSSNNNNNSSKSSFFPELRRTKSFSASKNEGFSGVFEPQRKSCDVRVRNT 124

Query: 194 LWSLFNLDDERKGCLTDK------EIEETRDL--------PVIQLKEEDEDE 307
           LWSLFN D ER   +  +      EIE             PV + KEE+E E
Sbjct: 125 LWSLFNQDSERNPSVKKEPFKGGPEIEAVEPRISCSSVRGPVFESKEEEEIE 176


>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
           gi|223525005|gb|EEF27813.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 676

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 49/102 (48%), Positives = 60/102 (58%), Gaps = 17/102 (16%)
 Frame = +2

Query: 50  IKSIFKGASSS--GFLPELRRCKSFSGGRNESVLSL-EPKRKSCDVRVRNTLWSLFNLDD 220
           +K+IFK +SS    F PELRR KSFS  +NE    + EP+RKSCDVRVR+TLWSLF  DD
Sbjct: 76  LKAIFKPSSSDRPSFFPELRRTKSFSASKNEGFSGVFEPQRKSCDVRVRSTLWSLFYQDD 135

Query: 221 E-----RKGCLTDKEIEE---------TRDLPVIQLKEEDED 304
           E     +K  L   EI E          R  P++  +EED D
Sbjct: 136 EQRNPSKKDSLKGPEIIEVESRISSSSVRGGPIV-FEEEDSD 176


>ref|NP_181342.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330254392|gb|AEC09486.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 619

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/61 (63%), Positives = 48/61 (78%), Gaps = 3/61 (4%)
 Frame = +2

Query: 50  IKSIFKGASSSG-FLPELRRCKSFSGGRNE--SVLSLEPKRKSCDVRVRNTLWSLFNLDD 220
           +K+IFK +SSSG F PELRR KSFS  + E  S+ + EP+R+SCDVRVRNTLWSLF+ D 
Sbjct: 85  LKAIFKPSSSSGSFFPELRRTKSFSASKAEAFSLGAFEPQRRSCDVRVRNTLWSLFHEDA 144

Query: 221 E 223
           E
Sbjct: 145 E 145


>dbj|BAC43575.1| unknown protein [Arabidopsis thaliana]
          Length = 619

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/61 (63%), Positives = 48/61 (78%), Gaps = 3/61 (4%)
 Frame = +2

Query: 50  IKSIFKGASSSG-FLPELRRCKSFSGGRNE--SVLSLEPKRKSCDVRVRNTLWSLFNLDD 220
           +K+IFK +SSSG F PELRR KSFS  + E  S+ + EP+R+SCDVRVRNTLWSLF+ D 
Sbjct: 85  LKAIFKPSSSSGSFFPELRRTKSFSASKAEAFSLGAFEPQRRSCDVRVRNTLWSLFHEDA 144

Query: 221 E 223
           E
Sbjct: 145 E 145


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