BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031480
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              309   4e-82
ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800...   302   5e-80
gb|AAP43914.1| integrase [Gossypium raimondii]                        296   4e-78
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     294   1e-77
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|...   294   1e-77

>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  309 bits (792), Expect = 4e-82
 Identities = 148/257 (57%), Positives = 185/257 (71%)
 Frame = -2

Query: 771  LQF*AGKDNRVVDALSRRSHLLVTLRTSLFGFDELRDLYAQDAYFGPIHADCLVHHGVSG 592
            +++  GKDN V DALSRR  LL +L   L GF+ ++ LYA D+ F  I++ C       G
Sbjct: 1304 IKYKKGKDNVVADALSRRYVLLSSLDAKLLGFEHIKSLYANDSDFEKIYSSC--EKFAFG 1361

Query: 591  EFFLHDGFIFRGSQLCIPVSSLRDQIMIEMHAGGLSCHFGIIKTIASIREKYFWPTMRRD 412
            +++ HDGF+F  ++LCIP SSLR+  + E H GGL  HFG+ KTI  +++ + WP M+RD
Sbjct: 1362 KYYRHDGFLFYDNRLCIPNSSLRELFIREAHGGGLMGHFGVSKTIKVMQDHFHWPHMKRD 1421

Query: 411  INRFIERCYVCQTAKGKHTNAGLYTPLPIPDKPWVDVSMDFVLGLPRSTHGKDSIFVVVD 232
            + R  ERC  C+ AK K    GLYTPLPIP  PW D+SMDFV+GLPR+  GKDSIFVVVD
Sbjct: 1422 VERICERCPTCKQAKAKSQPHGLYTPLPIPSHPWNDISMDFVVGLPRTRTGKDSIFVVVD 1481

Query: 231  RFSKMAHFIPCTRTTDAAQVAHLYFREIVRLHGLPRTITSDRDVKFTSYFWKTLWKLFKS 52
            RFSKMAHFIPC +T DA  +A+L+FRE+VRLHG+P+TI SDRD KF SYFWKTLW    +
Sbjct: 1482 RFSKMAHFIPCHKTDDAIHIANLFFREVVRLHGMPKTIVSDRDTKFLSYFWKTLWSKLGT 1541

Query: 51   KLQFSTAFHPQTDGQTE 1
            KL FST  HPQTDGQTE
Sbjct: 1542 KLLFSTTCHPQTDGQTE 1558


>ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800881 [Glycine max]
          Length = 1746

 Score =  302 bits (774), Expect = 5e-80
 Identities = 142/252 (56%), Positives = 179/252 (71%)
 Frame = -2

Query: 756  GKDNRVVDALSRRSHLLVTLRTSLFGFDELRDLYAQDAYFGPIHADCLVHHGVSGEFFLH 577
            GK N V DALSRR  LL  L T LFG + L+D+Y  D  F  I A C         ++ H
Sbjct: 1046 GKGNVVADALSRRHALLAMLETKLFGLESLKDMYVHDVDFAEIFAAC--EKFSENGYYRH 1103

Query: 576  DGFIFRGSQLCIPVSSLRDQIMIEMHAGGLSCHFGIIKTIASIREKYFWPTMRRDINRFI 397
            +GF+F+ ++LC+P  S+R+ ++ E H GGL  HFG+ KT+  + E +FWP MRRD+++F 
Sbjct: 1104 NGFLFKANKLCVPKCSIRELLVSESHEGGLMGHFGVQKTLEILLEHFFWPHMRRDVHKFC 1163

Query: 396  ERCYVCQTAKGKHTNAGLYTPLPIPDKPWVDVSMDFVLGLPRSTHGKDSIFVVVDRFSKM 217
              C VC+ AK K    GLYTPLP+P+ PW D+SMDFVLGLP++ +GKDS+FVVVDRFSKM
Sbjct: 1164 GHCIVCKQAKSKVKPHGLYTPLPVPEYPWTDISMDFVLGLPKTKNGKDSVFVVVDRFSKM 1223

Query: 216  AHFIPCTRTTDAAQVAHLYFREIVRLHGLPRTITSDRDVKFTSYFWKTLWKLFKSKLQFS 37
            AHFIPC +  DA  VA L+F+EIVRLHGLPR+I SDRD KF S+FW+TLW    +KL FS
Sbjct: 1224 AHFIPCKKVDDACHVADLFFKEIVRLHGLPRSIVSDRDAKFLSHFWRTLWGKIGTKLLFS 1283

Query: 36   TAFHPQTDGQTE 1
            T  HPQTDGQTE
Sbjct: 1284 TTCHPQTDGQTE 1295


>gb|AAP43914.1| integrase [Gossypium raimondii]
          Length = 340

 Score =  296 bits (757), Expect = 4e-78
 Identities = 137/257 (53%), Positives = 180/257 (70%)
 Frame = -2

Query: 777 FHLQF*AGKDNRVVDALSRRSHLLVTLRTSLFGFDELRDLYAQDAYFGPIHADCLVHHGV 598
           + +++  GKDN V DALSRR  LL TL T L GF+ L+DLYA D+ F  I+  C   HG 
Sbjct: 81  YGIRYKKGKDNIVADALSRRYTLLSTLHTKLLGFEYLKDLYATDSDFASIYDAC--EHGA 138

Query: 597 SGEFFLHDGFIFRGSQLCIPVSSLRDQIMIEMHAGGLSCHFGIIKTIASIREKYFWPTMR 418
             +F+ HDG++F+ ++LC+P  S+R+ ++ E H+GGL  HFG+ KT   + E ++WP MR
Sbjct: 139 FHKFYKHDGYLFQNNRLCLPKCSMRELLVREAHSGGLMGHFGVTKTYDVLHEHFYWPNMR 198

Query: 417 RDINRFIERCYVCQTAKGKHTNAGLYTPLPIPDKPWVDVSMDFVLGLPRSTHGKDSIFVV 238
           + + +    C  C+  K      GLYTPLP+P  PW D+S+DFV+GLP + HG+DSIFVV
Sbjct: 199 KLVEKICSTCITCKQDKSTVMPHGLYTPLPVPSSPWTDISIDFVIGLPITKHGRDSIFVV 258

Query: 237 VDRFSKMAHFIPCTRTTDAAQVAHLYFREIVRLHGLPRTITSDRDVKFTSYFWKTLWKLF 58
           VDRFSKMAHFIPC +T DA  VA L+FRE+VRLHG+PRTI SDRD KF S+FWK LW   
Sbjct: 259 VDRFSKMAHFIPCHKTDDATHVADLFFREVVRLHGIPRTIVSDRDAKFLSHFWKVLWGKL 318

Query: 57  KSKLQFSTAFHPQTDGQ 7
            +KL +ST  HPQTDG+
Sbjct: 319 GTKLLYSTTCHPQTDGR 335


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  294 bits (753), Expect = 1e-77
 Identities = 138/252 (54%), Positives = 178/252 (70%)
 Frame = -2

Query: 756  GKDNRVVDALSRRSHLLVTLRTSLFGFDELRDLYAQDAYFGPIHADCLVHHGVSGEFFLH 577
            GK+N V DALSR++ LL  L   + G + +++LY+ D  F   +A C    G   ++ +H
Sbjct: 1120 GKENIVADALSRKNVLLNQLEVKVTGIESIKELYSADLDFSEPYAKCTAGKGWE-KYHIH 1178

Query: 576  DGFIFRGSQLCIPVSSLRDQIMIEMHAGGLSCHFGIIKTIASIREKYFWPTMRRDINRFI 397
            DGF+FR ++LC+P  S+R  ++ E HAGGL  HFG  KT   + + ++WP MRRD+ R +
Sbjct: 1179 DGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLV 1238

Query: 396  ERCYVCQTAKGKHTNAGLYTPLPIPDKPWVDVSMDFVLGLPRSTHGKDSIFVVVDRFSKM 217
            +RC  C  AK K    GLYTPLP+P  PW D+SMDFVLGLPR+  G+DSIFVVVDRFSKM
Sbjct: 1239 QRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKM 1298

Query: 216  AHFIPCTRTTDAAQVAHLYFREIVRLHGLPRTITSDRDVKFTSYFWKTLWKLFKSKLQFS 37
            AHFIPC ++ DA+ +A L+F EIVRLHG+P+TI SDRD KF SYFWKTLW    ++L FS
Sbjct: 1299 AHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFS 1358

Query: 36   TAFHPQTDGQTE 1
            T  HPQTDGQTE
Sbjct: 1359 TTCHPQTDGQTE 1370


>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 681

 Score =  294 bits (753), Expect = 1e-77
 Identities = 138/252 (54%), Positives = 178/252 (70%)
 Frame = -2

Query: 756 GKDNRVVDALSRRSHLLVTLRTSLFGFDELRDLYAQDAYFGPIHADCLVHHGVSGEFFLH 577
           GK+N V DALSR++ LL  L   + G + +++LY+ D  F   +A C    G   ++ +H
Sbjct: 88  GKENIVADALSRKNVLLNQLEVKVTGIESIKELYSADLDFSEPYAKCTAGKGWE-KYHIH 146

Query: 576 DGFIFRGSQLCIPVSSLRDQIMIEMHAGGLSCHFGIIKTIASIREKYFWPTMRRDINRFI 397
           DGF+FR ++LC+P  S+R  ++ E HAGGL  HFG  KT   + + ++WP MRRD+ R +
Sbjct: 147 DGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLV 206

Query: 396 ERCYVCQTAKGKHTNAGLYTPLPIPDKPWVDVSMDFVLGLPRSTHGKDSIFVVVDRFSKM 217
           +RC  C  AK K    GLYTPLP+P  PW D+SMDFVLGLPR+  G+DSIFVVVDRFSKM
Sbjct: 207 QRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKM 266

Query: 216 AHFIPCTRTTDAAQVAHLYFREIVRLHGLPRTITSDRDVKFTSYFWKTLWKLFKSKLQFS 37
           AHFIPC ++ DA+ +A L+F EIVRLHG+P+TI SDRD KF SYFWKTLW    ++L FS
Sbjct: 267 AHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFS 326

Query: 36  TAFHPQTDGQTE 1
           T  HPQTDGQTE
Sbjct: 327 TTCHPQTDGQTE 338