BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031459
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related prote...    63   2e-08
ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm...    62   4e-08
sp|A9UL14.1|RBR_MEDSA RecName: Full=Retinoblastoma-related prote...    62   5e-08
ref|XP_003627961.1| Retinoblastoma-related protein [Medicago tru...    62   6e-08
ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-...    60   2e-07

>sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related protein
           gi|89111303|dbj|BAE80326.1| retinoblastoma related
           protein [Camellia sinensis]
          Length = 1025

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/42 (69%), Positives = 35/42 (83%)
 Frame = +1

Query: 214 ILMRVILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCN 339
           + +  ILI+H+PVR RNF + DSPRFV KGSKGV+LLASLCN
Sbjct: 230 VAILAILIIHIPVRVRNFNLHDSPRFVMKGSKGVDLLASLCN 271


>ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
           gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName:
           Full=Retinoblastoma-related protein
           gi|223530511|gb|EEF32393.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1020

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = +1

Query: 229 ILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCN 339
           ILI+HVPVRFRNF + DS RFV+KG KGV+LLASLCN
Sbjct: 229 ILIIHVPVRFRNFNLNDSQRFVKKGDKGVDLLASLCN 265


>sp|A9UL14.1|RBR_MEDSA RecName: Full=Retinoblastoma-related protein; Short=MsRBR
           gi|62956049|gb|AAY23367.1| retinoblastoma-related
           protein [Medicago sativa]
          Length = 1025

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = +1

Query: 214 ILMRVILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCN 339
           I +  ILI+HVP RFRNF I DS RFV+K SKGV+LLASLCN
Sbjct: 223 ISIMAILIIHVPARFRNFNIQDSARFVKKSSKGVDLLASLCN 264


>ref|XP_003627961.1| Retinoblastoma-related protein [Medicago truncatula]
           gi|355521983|gb|AET02437.1| Retinoblastoma-related
           protein [Medicago truncatula]
          Length = 1052

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = +1

Query: 214 ILMRVILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCN 339
           I +  ILI+HVP RFRNF I DS RFV+K SKGV+LLASLCN
Sbjct: 250 ISIMAILIIHVPARFRNFNIHDSARFVKKSSKGVDLLASLCN 291


>ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
          Length = 1002

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = +1

Query: 214 ILMRVILILHVPVRFRNFCILDSPRFVRKGSKGVELLASLCN 339
           I +  ILI+HVP RFRNF I DS RFV+K +KGV+LLASLCN
Sbjct: 213 ISILAILIIHVPTRFRNFNIHDSSRFVKKSNKGVDLLASLCN 254