BLASTX nr result

ID: Coptis25_contig00031443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031443
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267915.2| PREDICTED: regulatory protein recX-like [Vit...   144   9e-33
emb|CBI39797.3| unnamed protein product [Vitis vinifera]              144   9e-33
ref|XP_002300573.1| predicted protein [Populus trichocarpa] gi|2...   141   7e-32
ref|XP_003544586.1| PREDICTED: uncharacterized protein LOC100803...   140   1e-31
gb|ACU19894.1| unknown [Glycine max]                                  140   1e-31

>ref|XP_002267915.2| PREDICTED: regulatory protein recX-like [Vitis vinifera]
          Length = 301

 Score =  144 bits (363), Expect = 9e-33
 Identities = 71/106 (66%), Positives = 83/106 (78%)
 Frame = +1

Query: 1   WSSSTWGPKRIKQALYRKGVSEVDANKATKYVFEDSGSGENGEQNVLGMSKVSMDRLFSQ 180
           WSSS+WGP+RIKQAL++KGVSE DA KA K VF+D GSG + E    G+S ++MD LF Q
Sbjct: 196 WSSSSWGPRRIKQALFKKGVSEADAEKAVKLVFKDDGSGGDQESRH-GLSNLAMDHLFVQ 254

Query: 181 TSKQWLRSQNVEYEKRKSRIIRWLQYRGFSWGVVNLILKKLESQ*P 318
            SKQWLR  +V  E RKSRIIRWLQYRGF+W VV+ ILKKLESQ P
Sbjct: 255 ASKQWLRGHDVPRETRKSRIIRWLQYRGFTWAVVSFILKKLESQYP 300


>emb|CBI39797.3| unnamed protein product [Vitis vinifera]
          Length = 382

 Score =  144 bits (363), Expect = 9e-33
 Identities = 71/106 (66%), Positives = 83/106 (78%)
 Frame = +1

Query: 1   WSSSTWGPKRIKQALYRKGVSEVDANKATKYVFEDSGSGENGEQNVLGMSKVSMDRLFSQ 180
           WSSS+WGP+RIKQAL++KGVSE DA KA K VF+D GSG + E    G+S ++MD LF Q
Sbjct: 277 WSSSSWGPRRIKQALFKKGVSEADAEKAVKLVFKDDGSGGDQESRH-GLSNLAMDHLFVQ 335

Query: 181 TSKQWLRSQNVEYEKRKSRIIRWLQYRGFSWGVVNLILKKLESQ*P 318
            SKQWLR  +V  E RKSRIIRWLQYRGF+W VV+ ILKKLESQ P
Sbjct: 336 ASKQWLRGHDVPRETRKSRIIRWLQYRGFTWAVVSFILKKLESQYP 381


>ref|XP_002300573.1| predicted protein [Populus trichocarpa] gi|222847831|gb|EEE85378.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  141 bits (355), Expect = 7e-32
 Identities = 68/104 (65%), Positives = 83/104 (79%)
 Frame = +1

Query: 1   WSSSTWGPKRIKQALYRKGVSEVDANKATKYVFEDSGSGENGEQNVLGMSKVSMDRLFSQ 180
           WSSS+WGP+RIK+AL  KGVSE D +KA K VFED  S E  +++ +GMSK+SMD+L  Q
Sbjct: 272 WSSSSWGPRRIKKALSNKGVSEADTDKALKLVFEDGDSDE--QESKVGMSKISMDQLLIQ 329

Query: 181 TSKQWLRSQNVEYEKRKSRIIRWLQYRGFSWGVVNLILKKLESQ 312
            SKQWLR Q+V  + RKSR+IRWLQYRGF+W VVN +LKKLESQ
Sbjct: 330 ASKQWLRGQDVPKDTRKSRLIRWLQYRGFNWDVVNFVLKKLESQ 373


>ref|XP_003544586.1| PREDICTED: uncharacterized protein LOC100803154 [Glycine max]
          Length = 317

 Score =  140 bits (354), Expect = 1e-31
 Identities = 65/104 (62%), Positives = 85/104 (81%)
 Frame = +1

Query: 1   WSSSTWGPKRIKQALYRKGVSEVDANKATKYVFEDSGSGENGEQNVLGMSKVSMDRLFSQ 180
           W+SS+WGP+RIKQAL++KGVS+ DA KA + VF+D+   E+  ++V+G+SK SMD L++Q
Sbjct: 210 WTSSSWGPRRIKQALFKKGVSQADAEKAVEVVFKDNDCAED-HKSVIGLSKHSMDHLYTQ 268

Query: 181 TSKQWLRSQNVEYEKRKSRIIRWLQYRGFSWGVVNLILKKLESQ 312
            SKQW RSQNV  E RKSRI+RWLQYRGF W V+N+ILKKL+ Q
Sbjct: 269 ASKQWFRSQNVLKETRKSRIVRWLQYRGFDWHVINIILKKLDRQ 312


>gb|ACU19894.1| unknown [Glycine max]
          Length = 196

 Score =  140 bits (354), Expect = 1e-31
 Identities = 65/104 (62%), Positives = 85/104 (81%)
 Frame = +1

Query: 1   WSSSTWGPKRIKQALYRKGVSEVDANKATKYVFEDSGSGENGEQNVLGMSKVSMDRLFSQ 180
           W+SS+WGP+RIKQAL++KGVS+ DA KA + VF+D+   E+  ++V+G+SK SMD L++Q
Sbjct: 89  WTSSSWGPRRIKQALFKKGVSQADAEKAVEVVFKDNDCAED-HKSVIGLSKHSMDHLYTQ 147

Query: 181 TSKQWLRSQNVEYEKRKSRIIRWLQYRGFSWGVVNLILKKLESQ 312
            SKQW RSQNV  E RKSRI+RWLQYRGF W V+N+ILKKL+ Q
Sbjct: 148 ASKQWFRSQNVLKETRKSRIVRWLQYRGFDWHVINIILKKLDRQ 191


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