BLASTX nr result

ID: Coptis25_contig00031440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031440
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20818.3| unnamed protein product [Vitis vinifera]              191   3e-46
gb|EEC76999.1| hypothetical protein OsI_15321 [Oryza sativa Indi...   182   2e-43
dbj|BAG86697.1| unnamed protein product [Oryza sativa Japonica G...   182   2e-43
ref|NP_001052420.1| Os04g0306800 [Oryza sativa Japonica Group] g...   182   2e-43
dbj|BAJ87814.1| predicted protein [Hordeum vulgare subsp. vulgare]    177   5e-42

>emb|CBI20818.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  191 bits (486), Expect = 3e-46
 Identities = 111/283 (39%), Positives = 166/283 (58%), Gaps = 12/283 (4%)
 Frame = -1

Query: 1257 SCAKRSCSENLNSIASGTRQTGGLETCQALGVPNSAFIPGANGVAQRKFCREALEADPSQ 1078
            S  +R   +    + +G   +G  +  ++ GV N+  + GA+ +++++   E+    P  
Sbjct: 310  SPTERHSKQEAPGLGNGAYNSGKCKKLES-GVSNTGKLNGASNISRKRHFGES-STGPGN 367

Query: 1077 ALFS---------NHSLTKSELVRNEDAVETDLKPVQAQMLDVKLKLQQIEMEMSKIKGK 925
            +  S          +  T  +  + + A E        +MLD+K++  Q+E EM K++ K
Sbjct: 368  SSVSLVDKGNMDVQYKETSGDSKKTKLAEEVSEATFAQKMLDLKVRFHQLEREMCKLRSK 427

Query: 924  QVE-SNDGKPDLLSSSGAVNHSDDDAESRTIFVTNVHFAATKEALSLHFSKCGLVVKVVI 748
              +    GKPDL SSSG + H ++D E RT++VTNVHFAATKEALS HF+KCGLVV VVI
Sbjct: 428  HTDLKRGGKPDLSSSSGTLRHPEEDIEPRTVYVTNVHFAATKEALSNHFAKCGLVVNVVI 487

Query: 747  LSDAVTAQPKGAAYITFAHKESTDKAVALSGTSFWSRTIQVVRKGEIPVVTSAPPQPSGY 568
            L+D   AQPK +A+ITFA  ES +KA+ALSGTSF+SRT++V RK ++    SAPPQ +G 
Sbjct: 488  LTDETIAQPKRSAFITFASVESVNKALALSGTSFFSRTVKVFRKADMATGKSAPPQDAGM 547

Query: 567  PTWSQLPQPIRKVVFQRP-YSVSHFRWRRDQ-PVSTDQSISTS 445
            P  ++      K+   RP YS  H +WRR+  P  ++ S S +
Sbjct: 548  PVQARFTHIKGKIAVDRPLYSTPHLQWRRESIPTPSEPSASAN 590


>gb|EEC76999.1| hypothetical protein OsI_15321 [Oryza sativa Indica Group]
          Length = 366

 Score =  182 bits (461), Expect = 2e-43
 Identities = 111/264 (42%), Positives = 161/264 (60%), Gaps = 1/264 (0%)
 Frame = -1

Query: 1260 RSCAKRSCSENLNSIASGTRQTGGLETCQALGVPNSAFIPGANGVAQRKFCREALEADPS 1081
            RS   +S +E ++ + S    T   E+   +       +PG++ + Q    R  LE +  
Sbjct: 96   RSVPLQSQNEFISEVKSSV--TAVSESACHVSKSTKGQVPGSSKLGQLA-TRRNLETEVL 152

Query: 1080 QAL-FSNHSLTKSELVRNEDAVETDLKPVQAQMLDVKLKLQQIEMEMSKIKGKQVESNDG 904
            Q+   S+ + +K+    +ED      KP++ +MLDVKLKL+Q+E+++ K++ KQ + N+ 
Sbjct: 153  QSQQVSSPAQSKTGSSVHEDGGNCCNKPMKNEMLDVKLKLKQVELDVLKLRSKQAQINNV 212

Query: 903  KPDLLSSSGAVNHSDDDAESRTIFVTNVHFAATKEALSLHFSKCGLVVKVVILSDAVTAQ 724
            K   LSS    N  D+DA+SRT+ VTNVHFAATKEALS HF KCG V+K+ IL+DA++  
Sbjct: 213  KQGFLSSGPHAN-LDEDADSRTVLVTNVHFAATKEALSGHFMKCGTVLKINILTDAISGH 271

Query: 723  PKGAAYITFAHKESTDKAVALSGTSFWSRTIQVVRKGEIPVVTSAPPQPSGYPTWSQLPQ 544
            PKGAA++TF  KES +KAV+LSG+SF+SR + V+RK E P    A  QP G P  S    
Sbjct: 272  PKGAAFVTFTDKESVEKAVSLSGSSFFSRVLTVMRKAEAPPGFLASVQPIGRPLQSWNSP 331

Query: 543  PIRKVVFQRPYSVSHFRWRRDQPV 472
            PI+K V  R     H +W+R+Q V
Sbjct: 332  PIQKGVSPRQIPGYHLQWKREQSV 355


>dbj|BAG86697.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 366

 Score =  182 bits (461), Expect = 2e-43
 Identities = 111/264 (42%), Positives = 161/264 (60%), Gaps = 1/264 (0%)
 Frame = -1

Query: 1260 RSCAKRSCSENLNSIASGTRQTGGLETCQALGVPNSAFIPGANGVAQRKFCREALEADPS 1081
            RS   +S +E ++ + S    T   E+   +       +PG++ + Q    R  LE +  
Sbjct: 96   RSVPLQSQNEFISEVKSSV--TAVSESACHVSKSTKGQVPGSSKLGQLA-TRRNLETEVL 152

Query: 1080 QAL-FSNHSLTKSELVRNEDAVETDLKPVQAQMLDVKLKLQQIEMEMSKIKGKQVESNDG 904
            Q+   S+ + +K+    +ED      KP++ +MLDVKLKL+Q+E+++ K++ KQ + N+ 
Sbjct: 153  QSQQVSSPAQSKTGSSVHEDGGNCCNKPMKNEMLDVKLKLKQVELDVLKLRSKQAQINNV 212

Query: 903  KPDLLSSSGAVNHSDDDAESRTIFVTNVHFAATKEALSLHFSKCGLVVKVVILSDAVTAQ 724
            K   LSS    N  D+DA+SRT+ VTNVHFAATKEALS HF KCG V+K+ IL+DA++  
Sbjct: 213  KQGFLSSGPHAN-LDEDADSRTVLVTNVHFAATKEALSGHFMKCGTVLKINILTDAISGH 271

Query: 723  PKGAAYITFAHKESTDKAVALSGTSFWSRTIQVVRKGEIPVVTSAPPQPSGYPTWSQLPQ 544
            PKGAA++TF  KES +KAV+LSG+SF+SR + V+RK E P    A  QP G P  S    
Sbjct: 272  PKGAAFVTFTDKESVEKAVSLSGSSFFSRVLTVMRKAEAPPGFLASVQPIGRPLQSWNSP 331

Query: 543  PIRKVVFQRPYSVSHFRWRRDQPV 472
            PI+K V  R     H +W+R+Q V
Sbjct: 332  PIQKGVSPRQIPGYHLQWKREQSV 355


>ref|NP_001052420.1| Os04g0306800 [Oryza sativa Japonica Group]
            gi|38347198|emb|CAD40523.2| OSJNBa0023J03.10 [Oryza
            sativa Japonica Group] gi|113563991|dbj|BAF14334.1|
            Os04g0306800 [Oryza sativa Japonica Group]
            gi|116308926|emb|CAH66055.1| OSIGBa0125J07.4 [Oryza
            sativa Indica Group] gi|116309108|emb|CAH66214.1|
            OSIGBa0096F13.9 [Oryza sativa Indica Group]
            gi|215695292|dbj|BAG90483.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222628583|gb|EEE60715.1|
            hypothetical protein OsJ_14219 [Oryza sativa Japonica
            Group]
          Length = 649

 Score =  182 bits (461), Expect = 2e-43
 Identities = 111/264 (42%), Positives = 161/264 (60%), Gaps = 1/264 (0%)
 Frame = -1

Query: 1260 RSCAKRSCSENLNSIASGTRQTGGLETCQALGVPNSAFIPGANGVAQRKFCREALEADPS 1081
            RS   +S +E ++ + S    T   E+   +       +PG++ + Q    R  LE +  
Sbjct: 379  RSVPLQSQNEFISEVKSSV--TAVSESACHVSKSTKGQVPGSSKLGQLA-TRRNLETEVL 435

Query: 1080 QAL-FSNHSLTKSELVRNEDAVETDLKPVQAQMLDVKLKLQQIEMEMSKIKGKQVESNDG 904
            Q+   S+ + +K+    +ED      KP++ +MLDVKLKL+Q+E+++ K++ KQ + N+ 
Sbjct: 436  QSQQVSSPAQSKTGSSVHEDGGNCCNKPMKNEMLDVKLKLKQVELDVLKLRSKQAQINNV 495

Query: 903  KPDLLSSSGAVNHSDDDAESRTIFVTNVHFAATKEALSLHFSKCGLVVKVVILSDAVTAQ 724
            K   LSS    N  D+DA+SRT+ VTNVHFAATKEALS HF KCG V+K+ IL+DA++  
Sbjct: 496  KQGFLSSGPHAN-LDEDADSRTVLVTNVHFAATKEALSGHFMKCGTVLKINILTDAISGH 554

Query: 723  PKGAAYITFAHKESTDKAVALSGTSFWSRTIQVVRKGEIPVVTSAPPQPSGYPTWSQLPQ 544
            PKGAA++TF  KES +KAV+LSG+SF+SR + V+RK E P    A  QP G P  S    
Sbjct: 555  PKGAAFVTFTDKESVEKAVSLSGSSFFSRVLTVMRKAEAPPGFLASVQPIGRPLQSWNSP 614

Query: 543  PIRKVVFQRPYSVSHFRWRRDQPV 472
            PI+K V  R     H +W+R+Q V
Sbjct: 615  PIQKGVSPRQIPGYHLQWKREQSV 638


>dbj|BAJ87814.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 644

 Score =  177 bits (449), Expect = 5e-42
 Identities = 97/200 (48%), Positives = 136/200 (68%), Gaps = 1/200 (0%)
 Frame = -1

Query: 1068 SNHSLTKSELVRNEDAVETDLKPVQAQMLDVKLKLQQIEMEMSKIKGKQVESNDGKPDLL 889
            S+ + +KS     ED V    KPV+ +MLDVKLKL+Q+E++M K++ KQ + N+GK   L
Sbjct: 437  SSPAQSKSGSSVREDGVNYSNKPVKDEMLDVKLKLKQVELDMLKLRSKQAQINNGKQGAL 496

Query: 888  SSSGAVNHSDDDAESRTIFVTNVHFAATKEALSLHFSKCGLVVKVVILSDAVTAQPKGAA 709
             S G  ++ ++DA++RT+ VTNVHFAATKEALS HF KCG V+K+ +L+DA+T  PKGAA
Sbjct: 497  PS-GPHSNLEEDADARTVLVTNVHFAATKEALSTHFMKCGTVLKLNMLTDAITGHPKGAA 555

Query: 708  YITFAHKESTDKAVALSGTSFWSRTIQVVRKGEIPVVTSAPPQPSGYP-TWSQLPQPIRK 532
            ++TFA KES  +A++LSGTSF+SR + V+RK E P    A  Q  G P  W+    P +K
Sbjct: 556  FVTFADKESIGRALSLSGTSFYSRVLTVMRKAEAPPGFLASIQQIGRPLPWNS--PPFQK 613

Query: 531  VVFQRPYSVSHFRWRRDQPV 472
             V  +  S  H +W+R+Q V
Sbjct: 614  GVSPKQSSGHHLQWKREQSV 633


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