BLASTX nr result

ID: Coptis25_contig00031428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031428
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249...   122   2e-26
emb|CBI21665.3| unnamed protein product [Vitis vinifera]              122   2e-26
emb|CAN66834.1| hypothetical protein VITISV_030892 [Vitis vinifera]   122   2e-26
ref|XP_002325737.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_003630412.1| Vacuolar protein-sorting machinery protein [...   111   7e-23

>ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249130 [Vitis vinifera]
          Length = 2143

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/87 (72%), Positives = 69/87 (79%)
 Frame = +3

Query: 3    AKDEFTLDLVEQCSFQQQRVMHLVVTSRDEKVVSQAIKLNEQLQNVLARHDALLSVNTTS 182
            AKDEFTLDLVEQCSFQ+QRVMHLV+TSRDEKVVSQAI+LNEQL  +L RHDALLS   TS
Sbjct: 1953 AKDEFTLDLVEQCSFQKQRVMHLVMTSRDEKVVSQAIELNEQLHQILIRHDALLSGTPTS 2012

Query: 183  TASHFAHXXXXXXXXXMLFRRIRKGKA 263
            TA+H  H          LFRR+RKGKA
Sbjct: 2013 TANHVYHEGEEEEEAEQLFRRLRKGKA 2039


>emb|CBI21665.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/87 (72%), Positives = 69/87 (79%)
 Frame = +3

Query: 3   AKDEFTLDLVEQCSFQQQRVMHLVVTSRDEKVVSQAIKLNEQLQNVLARHDALLSVNTTS 182
           AKDEFTLDLVEQCSFQ+QRVMHLV+TSRDEKVVSQAI+LNEQL  +L RHDALLS   TS
Sbjct: 210 AKDEFTLDLVEQCSFQKQRVMHLVMTSRDEKVVSQAIELNEQLHQILIRHDALLSGTPTS 269

Query: 183 TASHFAHXXXXXXXXXMLFRRIRKGKA 263
           TA+H  H          LFRR+RKGKA
Sbjct: 270 TANHVYHEGEEEEEAEQLFRRLRKGKA 296


>emb|CAN66834.1| hypothetical protein VITISV_030892 [Vitis vinifera]
          Length = 298

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/87 (72%), Positives = 69/87 (79%)
 Frame = +3

Query: 3   AKDEFTLDLVEQCSFQQQRVMHLVVTSRDEKVVSQAIKLNEQLQNVLARHDALLSVNTTS 182
           AKDEFTLDLVEQCSFQ+QRVMHLV+TSRDEKVVSQAI+LNEQL  +L RHDALLS   TS
Sbjct: 108 AKDEFTLDLVEQCSFQKQRVMHLVMTSRDEKVVSQAIELNEQLHQILIRHDALLSGTPTS 167

Query: 183 TASHFAHXXXXXXXXXMLFRRIRKGKA 263
           TA+H  H          LFRR+RKGKA
Sbjct: 168 TANHVYHEGEEEEEAEQLFRRLRKGKA 194


>ref|XP_002325737.1| predicted protein [Populus trichocarpa] gi|222862612|gb|EEF00119.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  115 bits (287), Expect = 5e-24
 Identities = 65/100 (65%), Positives = 73/100 (73%), Gaps = 13/100 (13%)
 Frame = +3

Query: 3   AKDEFTLDLVEQCSFQQQRVMHLVVTSRDEKVVSQAIKLNEQLQNVLARHDALL------ 164
           AKDEFTLDLVEQCSFQ+QRVMHLV+TSRDEK+VSQAI+LNEQLQ VLARHD+LL      
Sbjct: 213 AKDEFTLDLVEQCSFQKQRVMHLVMTSRDEKLVSQAIELNEQLQKVLARHDSLLSGRSTV 272

Query: 165 ------SVNTTSTASHFAH-XXXXXXXXXMLFRRIRKGKA 263
                 S  TT+TA+HF H           LFRR+RKGKA
Sbjct: 273 SDTTTISDRTTTTANHFNHEESEEEEEPEQLFRRLRKGKA 312


>ref|XP_003630412.1| Vacuolar protein-sorting machinery protein [Medicago truncatula]
           gi|355524434|gb|AET04888.1| Vacuolar protein-sorting
           machinery protein [Medicago truncatula]
          Length = 388

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   AKDEFTLDLVEQCSFQQQRVMHLVVTSRDEKVVSQAIKLNEQLQNVLARHDALLSVNTTS 182
           A+DEFTLDLVEQCSFQ+QRVMHLV+ SRDE++VS+AI++NEQLQ VL RHD LLS   T+
Sbjct: 193 ARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSRAIEVNEQLQKVLERHDDLLSSKDTT 252

Query: 183 TASHFAH-XXXXXXXXXMLFRRIRKGKA 263
           T +HF H           LFRR+RKGKA
Sbjct: 253 TVNHFDHEEAEEEEEPEQLFRRLRKGKA 280


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