BLASTX nr result

ID: Coptis25_contig00031407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031407
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273072.1| PREDICTED: patellin-4 [Vitis vinifera] gi|29...   197   7e-49
ref|XP_002307646.1| predicted protein [Populus trichocarpa] gi|2...   190   1e-46
ref|XP_004152051.1| PREDICTED: patellin-4-like [Cucumis sativus]...   171   4e-41
ref|XP_003541355.1| PREDICTED: patellin-4-like [Glycine max]          168   4e-40
ref|XP_003536941.1| PREDICTED: patellin-4-like [Glycine max]          166   1e-39

>ref|XP_002273072.1| PREDICTED: patellin-4 [Vitis vinifera] gi|297744152|emb|CBI37122.3|
           unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  197 bits (501), Expect = 7e-49
 Identities = 91/141 (64%), Positives = 117/141 (82%)
 Frame = +2

Query: 53  VTKTLIKYISPENLPVQYGGLKRENDNEFSPENPVLELVVKPGCIDSIQVPVPEPGVSVV 232
           V  TL+K+I+PENLPVQYGGLKREND EFSP +  LEL+VK G I+SI++P  E GV+VV
Sbjct: 309 VADTLLKFIAPENLPVQYGGLKRENDIEFSPADKALELIVKAGTIESIEIPATEAGVTVV 368

Query: 233 WDLTLVGSDVCYKEEFVPDDDCSYNILIQKEKKFSGSVRNSFYISEPGRILLTIDNMTFK 412
           WD+T+VG DV YKEEF+P+D+ SY IL++K+KK   S+RNSFYISEPG+I++TI+N T+K
Sbjct: 369 WDMTIVGWDVNYKEEFIPEDEGSYKILLEKDKKMGQSMRNSFYISEPGKIVITIENGTYK 428

Query: 413 KKRVYYRLKIKPTVPMYISLK 475
           +KRV YR + KPTVPMY+  K
Sbjct: 429 RKRVLYRFRSKPTVPMYVYFK 449


>ref|XP_002307646.1| predicted protein [Populus trichocarpa] gi|222857095|gb|EEE94642.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score =  190 bits (482), Expect = 1e-46
 Identities = 92/144 (63%), Positives = 113/144 (78%), Gaps = 2/144 (1%)
 Frame = +2

Query: 50  RVTKTLIKYISPENLPVQYGGLKRENDNEFSPENPVLELVVKPGCIDSIQVPVPEPGVSV 229
           +VTKTL+K+ISPENLPV+YGGLKREND EF PE+   EL+VKP     IQ+PV E GV++
Sbjct: 238 KVTKTLLKHISPENLPVKYGGLKRENDIEFFPEDKASELIVKPNSASCIQIPVIEAGVTI 297

Query: 230 VWDLTLVGSDVCYKEEFVPDDDCSYNILIQ--KEKKFSGSVRNSFYISEPGRILLTIDNM 403
           VWD T+VG +V  K++F+PDD+ SY +L++  KEKK   SVRNSFYISEPG+I++TIDN 
Sbjct: 298 VWDFTVVGWEVTCKQQFIPDDEGSYEVLLRKDKEKKMGDSVRNSFYISEPGKIVITIDNA 357

Query: 404 TFKKKRVYYRLKIKPTVPMYISLK 475
           T KKKRVYYR K KPT P YI  K
Sbjct: 358 TLKKKRVYYRSKAKPTAPPYIIFK 381


>ref|XP_004152051.1| PREDICTED: patellin-4-like [Cucumis sativus]
           gi|449525126|ref|XP_004169570.1| PREDICTED:
           patellin-4-like [Cucumis sativus]
          Length = 450

 Score =  171 bits (434), Expect = 4e-41
 Identities = 83/140 (59%), Positives = 109/140 (77%), Gaps = 1/140 (0%)
 Frame = +2

Query: 50  RVTKTLIKYISPENLPVQYGGLKRENDNEFSPENPVLELVVKPGCIDSIQVPVPEPGVSV 229
           +VTKTL+K+I+PE LPV+YGGLKR+ D++FSP +   EL ++     +I+ PV E GV++
Sbjct: 307 KVTKTLLKFIAPEQLPVRYGGLKRDEDDDFSPADNASELSIRGNFAATIEFPVTEVGVTM 366

Query: 230 VWDLTLVGSDVCYKEEFVPDDDCSYNILIQKEKKFSGSVRNSFYISEPGRILLTIDNMTF 409
           VWD+T+VG DV YKEEFVP+D+ SY I +Q +KK   S+RN FYISEPG+I++TI+N TF
Sbjct: 367 VWDVTVVGWDVVYKEEFVPEDEGSYRIQLQNQKKAGESLRNCFYISEPGKIVITIENPTF 426

Query: 410 K-KKRVYYRLKIKPTVPMYI 466
             KK VYYR K KPTVPMYI
Sbjct: 427 NHKKTVYYRSKAKPTVPMYI 446


>ref|XP_003541355.1| PREDICTED: patellin-4-like [Glycine max]
          Length = 470

 Score =  168 bits (426), Expect = 4e-40
 Identities = 74/162 (45%), Positives = 116/162 (71%), Gaps = 6/162 (3%)
 Frame = +2

Query: 8   VFTSFLNS*YNNKY------RVTKTLIKYISPENLPVQYGGLKRENDNEFSPENPVLELV 169
           + + F+N     K+      +VT+TL+K+I+PE+LP +YGGL+R ND +FSP + V EL 
Sbjct: 309 LLSGFMNQRNKKKFILARSQKVTQTLLKFIAPEHLPTEYGGLRRNNDEDFSPSDKVSELK 368

Query: 170 VKPGCIDSIQVPVPEPGVSVVWDLTLVGSDVCYKEEFVPDDDCSYNILIQKEKKFSGSVR 349
           +K   +  ++ P+ + GV+++WD+T+VG DV YKEEF+PDD+ SY +L+Q +     S R
Sbjct: 369 IKGSTVSKVEFPIQQLGVTIMWDVTVVGWDVSYKEEFIPDDEGSYTVLLQNQSVDGSSTR 428

Query: 350 NSFYISEPGRILLTIDNMTFKKKRVYYRLKIKPTVPMYISLK 475
           NSFYISEPG+I++T++N T+KKK+++YR   + TVPM+  L+
Sbjct: 429 NSFYISEPGKIVITVENRTYKKKKMFYRSTARTTVPMFFLLQ 470


>ref|XP_003536941.1| PREDICTED: patellin-4-like [Glycine max]
          Length = 457

 Score =  166 bits (421), Expect = 1e-39
 Identities = 74/162 (45%), Positives = 117/162 (72%), Gaps = 6/162 (3%)
 Frame = +2

Query: 8   VFTSFLNS*YNNKY------RVTKTLIKYISPENLPVQYGGLKRENDNEFSPENPVLELV 169
           +F+ F+N     K+      +VT+TL+K+I+PE+LP +YGG++R ND +FSP + V E  
Sbjct: 296 LFSRFMNQRNKKKFILARPQKVTQTLLKFIAPEHLPTEYGGVRRNNDEDFSPSDKVSEHK 355

Query: 170 VKPGCIDSIQVPVPEPGVSVVWDLTLVGSDVCYKEEFVPDDDCSYNILIQKEKKFSGSVR 349
           +K   +  ++ PV E GV+++WD+T+VG +V YKEEF+PDD+ SY++L+Q +     S R
Sbjct: 356 IKGSTVSKVEFPVKELGVTIMWDVTVVGWNVSYKEEFIPDDEGSYSVLLQNQSVDGSSTR 415

Query: 350 NSFYISEPGRILLTIDNMTFKKKRVYYRLKIKPTVPMYISLK 475
           NSFYISEPG+I++T++N T+KKK+++YR   + TVPM+  L+
Sbjct: 416 NSFYISEPGKIVITVENGTYKKKKMFYRFTARTTVPMFFLLQ 457


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