BLASTX nr result

ID: Coptis25_contig00031394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031394
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAK55186.1| pinene synthase [Quercus ilex]                        106   2e-21
sp|Q93X23.1|MYRS_QUEIL RecName: Full=Myrcene synthase, chloropla...   106   2e-21
ref|XP_003634883.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synt...   103   1e-20
ref|XP_003634886.1| PREDICTED: myrcene synthase, chloroplastic, ...   103   2e-20
ref|XP_003634882.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synt...   103   2e-20

>emb|CAK55186.1| pinene synthase [Quercus ilex]
          Length = 597

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
 Frame = +1

Query: 22  VRIMLKKAVATLAQLELINILERLGIAHLFAEEINRSLHNIYEKK---DKFMMDNLYATA 192
           VR+ML K V  L QLELI IL+RLG+++ F EEI R L  +Y      D +  +NLYATA
Sbjct: 95  VRMMLHKVVNPLEQLELIEILQRLGLSYHFEEEIKRILDGVYNNDHGGDTWKAENLYATA 154

Query: 193 LTFRILRQHGFLVSQDVFRSYMDETGKFKESLCQDVKG 306
           L FR+LRQHG+ VSQ+VF S+ DE G FK  LC+D KG
Sbjct: 155 LKFRLLRQHGYSVSQEVFNSFKDERGSFKACLCEDTKG 192


>sp|Q93X23.1|MYRS_QUEIL RecName: Full=Myrcene synthase, chloroplastic; Flags: Precursor
           gi|14331015|emb|CAC41012.1| putative chloroplast terpene
           synthase [Quercus ilex]
          Length = 597

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
 Frame = +1

Query: 22  VRIMLKKAVATLAQLELINILERLGIAHLFAEEINRSLHNIYEKK---DKFMMDNLYATA 192
           VR+ML K V  L QLELI IL+RLG+++ F EEI R L  +Y      D +  +NLYATA
Sbjct: 95  VRMMLHKVVNPLEQLELIEILQRLGLSYHFEEEIKRILDGVYNNDHGGDTWKAENLYATA 154

Query: 193 LTFRILRQHGFLVSQDVFRSYMDETGKFKESLCQDVKG 306
           L FR+LRQHG+ VSQ+VF S+ DE G FK  LC+D KG
Sbjct: 155 LKFRLLRQHGYSVSQEVFNSFKDERGSFKACLCEDTKG 192


>ref|XP_003634883.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synthase,
           chloroplastic-like [Vitis vinifera]
          Length = 726

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/99 (53%), Positives = 72/99 (72%), Gaps = 3/99 (3%)
 Frame = +1

Query: 19  DVRIMLKKAVATLAQLELINILERLGIAHLFAEEINR---SLHNIYEKKDKFMMDNLYAT 189
           DV+ ML K    L QLELI++L+RLG+ + F +EI R   S++N Y + +++M D+LYAT
Sbjct: 86  DVKPMLGKVKKPLDQLELIDVLQRLGLYYHFKDEIKRILDSIYNQYNQHEEWMKDDLYAT 145

Query: 190 ALTFRILRQHGFLVSQDVFRSYMDETGKFKESLCQDVKG 306
           AL FR+LRQHG+ V QDVF  + DETG FK  LC+D+KG
Sbjct: 146 ALEFRLLRQHGYDVPQDVFIRFKDETGSFKACLCEDMKG 184


>ref|XP_003634886.1| PREDICTED: myrcene synthase, chloroplastic, partial [Vitis
           vinifera]
          Length = 471

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/99 (52%), Positives = 70/99 (70%), Gaps = 3/99 (3%)
 Frame = +1

Query: 19  DVRIMLKKAVATLAQLELINILERLGIAHLFAEEINR---SLHNIYEKKDKFMMDNLYAT 189
           DV+ ML K    L QLELI++L+RLGI + F +EI R   S++N Y + +++  D+LY T
Sbjct: 86  DVKPMLGKVKKPLDQLELIDVLQRLGIYYHFKDEIKRILNSIYNQYNRHEEWQKDDLYTT 145

Query: 190 ALTFRILRQHGFLVSQDVFRSYMDETGKFKESLCQDVKG 306
           AL FR+LRQHG+ V QDVF  + DETG FK  LC+D+KG
Sbjct: 146 ALEFRLLRQHGYDVPQDVFSRFKDETGSFKACLCEDIKG 184


>ref|XP_003634882.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synthase,
           chloroplastic-like [Vitis vinifera]
          Length = 459

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/99 (52%), Positives = 70/99 (70%), Gaps = 3/99 (3%)
 Frame = +1

Query: 19  DVRIMLKKAVATLAQLELINILERLGIAHLFAEEINR---SLHNIYEKKDKFMMDNLYAT 189
           DV+ ML K    L QLELI++L+RLGI + F +EI R   S++N Y + +++  D+LY T
Sbjct: 86  DVKPMLGKVKKPLDQLELIDVLQRLGIYYHFKDEIKRILNSIYNQYNRHEEWQKDDLYTT 145

Query: 190 ALTFRILRQHGFLVSQDVFRSYMDETGKFKESLCQDVKG 306
           AL FR+LRQHG+ V QDVF  + DETG FK  LC+D+KG
Sbjct: 146 ALEFRLLRQHGYDVPQDVFSRFKDETGSFKACLCEDIKG 184


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