BLASTX nr result

ID: Coptis25_contig00031393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031393
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichoc...   101   1e-19
ref|XP_004137218.1| PREDICTED: tRNA dimethylallyltransferase 9-l...    96   6e-18
emb|CBI20214.3| unnamed protein product [Vitis vinifera]               96   6e-18
ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [...    96   6e-18
ref|XP_002524264.1| ATP binding protein, putative [Ricinus commu...    82   8e-14

>ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichocarpa]
           gi|222847679|gb|EEE85226.1| tRNA isopentenyltransferase
           [Populus trichocarpa]
          Length = 443

 Score =  101 bits (251), Expect = 1e-19
 Identities = 41/64 (64%), Positives = 58/64 (90%)
 Frame = -1

Query: 578 DFIYEAYHEQSGNLVVPESLQMKKDLSSRREISEMKAYRTKNRHFVRRENCSEVFDWIQN 399
           +F+Y+AYH+Q+G+LVVPESL+MKKD++SRRE+ ++KAYRTKNRHFV R +CS++ DWI+ 
Sbjct: 375 NFVYDAYHDQTGSLVVPESLRMKKDMTSRREVLQLKAYRTKNRHFVSRNDCSDILDWIRT 434

Query: 398 TQAQ 387
           TQ +
Sbjct: 435 TQGE 438


>ref|XP_004137218.1| PREDICTED: tRNA dimethylallyltransferase 9-like [Cucumis sativus]
           gi|449483192|ref|XP_004156518.1| PREDICTED: tRNA
           dimethylallyltransferase 9-like [Cucumis sativus]
          Length = 482

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 41/65 (63%), Positives = 56/65 (86%)
 Frame = -1

Query: 578 DFIYEAYHEQSGNLVVPESLQMKKDLSSRREISEMKAYRTKNRHFVRRENCSEVFDWIQN 399
           +F+Y+AYH +SGN+ VPESL+MK+D SS RE SEMKAYRT+NR+FV+R++C++V DWI  
Sbjct: 412 NFVYDAYHSESGNISVPESLRMKRDGSSYREASEMKAYRTRNRYFVKRQDCADVLDWIGR 471

Query: 398 TQAQY 384
           TQ+ Y
Sbjct: 472 TQSVY 476


>emb|CBI20214.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 40/62 (64%), Positives = 54/62 (87%)
 Frame = -1

Query: 578 DFIYEAYHEQSGNLVVPESLQMKKDLSSRREISEMKAYRTKNRHFVRRENCSEVFDWIQN 399
           +FI++AY++Q+G LVVP+SL MKKD+S+ REI E+KAYRTKNRHF+ RE+CS++ DWI  
Sbjct: 370 NFIHDAYYDQTGKLVVPKSLSMKKDMSNNREIKELKAYRTKNRHFINREDCSDILDWIWR 429

Query: 398 TQ 393
           TQ
Sbjct: 430 TQ 431


>ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [Vitis vinifera]
          Length = 447

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 40/62 (64%), Positives = 54/62 (87%)
 Frame = -1

Query: 578 DFIYEAYHEQSGNLVVPESLQMKKDLSSRREISEMKAYRTKNRHFVRRENCSEVFDWIQN 399
           +FI++AY++Q+G LVVP+SL MKKD+S+ REI E+KAYRTKNRHF+ RE+CS++ DWI  
Sbjct: 385 NFIHDAYYDQTGKLVVPKSLSMKKDMSNNREIKELKAYRTKNRHFINREDCSDILDWIWR 444

Query: 398 TQ 393
           TQ
Sbjct: 445 TQ 446


>ref|XP_002524264.1| ATP binding protein, putative [Ricinus communis]
           gi|223536455|gb|EEF38103.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 446

 Score = 81.6 bits (200), Expect = 8e-14
 Identities = 36/59 (61%), Positives = 50/59 (84%)
 Frame = -1

Query: 578 DFIYEAYHEQSGNLVVPESLQMKKDLSSRREISEMKAYRTKNRHFVRRENCSEVFDWIQ 402
           +FIY+AYH+Q+G+LVVPESL+M K  S++RE  ++K YRTKNRHFV R +CS++ DWI+
Sbjct: 380 NFIYDAYHDQTGSLVVPESLRMNK--SNQRENLQLKTYRTKNRHFVSRNDCSDILDWIR 436


Top