BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031386
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    77   1e-12
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]          77   2e-12
dbj|BAB01814.1| unnamed protein product [Arabidopsis thaliana]         76   2e-12
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   7e-12
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              74   1e-11

>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
 Frame = -2

Query: 344 SMRSLLEFFK--------GWKVEKLRFSPRQEKSLSSNQSLPAIPSYLMLIFDVPATTYS 189
           S R++L F K        GWK + L  + R+    S  Q   AIP+Y+M  F +P     
Sbjct: 9   SKRAVLGFVKERVWSRLNGWKEKSLSVAGREVLIKSVAQ---AIPTYIMSCFRLPDGVCX 65

Query: 188 KLDSMNANFFWGQNKNNANKTHFICWNKVCQPKS*GGLGIRLASNHNTTLLAKLFWRLIK 9
           +++SM  NF+WGQ K    K H+  W ++C+ K  GG+G R   + N+ LLAK  WRL +
Sbjct: 66  EIESMVCNFWWGQ-KEETRKIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQ 124

Query: 8   EP 3
            P
Sbjct: 125 RP 126


>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/106 (36%), Positives = 58/106 (54%)
 Frame = -2

Query: 320 FKGWKVEKLRFSPRQEKSLSSNQSLPAIPSYLMLIFDVPATTYSKLDSMNANFFWGQNKN 141
           F  WKV  L    R  + +     L +I +Y+M  F++P  T  +++ M  NF+WG ++N
Sbjct: 16  FGSWKVRTLS---RAGREIMIKSVLQSISTYIMGCFELPEGTCDRIEKMMCNFYWGGDRN 72

Query: 140 NANKTHFICWNKVCQPKS*GGLGIRLASNHNTTLLAKLFWRLIKEP 3
            + K H+  W K+C+ K  GGLG R   N N  +LAK  WRL+  P
Sbjct: 73  GS-KMHWRSWEKLCRSKRNGGLGFRRLKNFNRAMLAKQGWRLLTLP 117


>dbj|BAB01814.1| unnamed protein product [Arabidopsis thaliana]
          Length = 170

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/124 (37%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
 Frame = -2

Query: 359 GVHKTSMRS-----LLEFFKGWKVEKLRFSPRQEKSLSSNQSLPAIPSYLMLIFDVPATT 195
           G  KT M S     L     GW     +F  +  K +       A+P+Y+M  F +P T 
Sbjct: 12  GGSKTKMFSFVRDRLQNRINGWSA---KFLSKGGKEVMIKLVATALPTYVMSCFTLPKTI 68

Query: 194 YSKLDSMNANFFWGQNKNNANKTHFICWNKVCQPKS*GGLGIRLASNHNTTLLAKLFWRL 15
            SKL S    F+W  N   +   H++ W+KVC  KS GGLG R   N N+ LLAK  WRL
Sbjct: 69  TSKLTSAIPKFWWSSN-GESRGMHWMAWDKVCYSKSEGGLGFRSVDNFNSALLAKQLWRL 127

Query: 14  IKEP 3
           I  P
Sbjct: 128 ITVP 131


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/101 (41%), Positives = 59/101 (58%)
 Frame = -2

Query: 317  KGWKVEKLRFSPRQEKSLSSNQSLPAIPSYLMLIFDVPATTYSKLDSMNANFFWGQNKNN 138
            +GWK EKL   P +E  + S     AIP+Y+M +F +P+    ++ S+ A F+WG +  N
Sbjct: 780  QGWK-EKLLSRPGKEVLIKSVAQ--AIPTYMMSVFSLPSGLIDEIHSLLARFWWGSSDTN 836

Query: 137  ANKTHFICWNKVCQPKS*GGLGIRLASNHNTTLLAKLFWRL 15
              K H+  W+ +C PKS GGLG R     N +LLAK  WRL
Sbjct: 837  -RKMHWHSWDTLCYPKSMGGLGFRDLHCFNQSLLAKQAWRL 876


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/104 (36%), Positives = 56/104 (53%)
 Frame = -2

Query: 314 GWKVEKLRFSPRQEKSLSSNQSLPAIPSYLMLIFDVPATTYSKLDSMNANFFWGQNKNNA 135
           GW     +F  +  K +     +  +P+Y+M  F +P T  SKL S  A F+W  +   +
Sbjct: 628 GWSA---KFLSKGGKEVMIKSVVAVLPTYVMSCFRLPKTITSKLTSAVAKFWWSSD-GES 683

Query: 134 NKTHFICWNKVCQPKS*GGLGIRLASNHNTTLLAKLFWRLIKEP 3
              H++ WNK+C  K+ GGLG R  ++ N+ LLAK  WRLI  P
Sbjct: 684 RGMHWMAWNKLCSSKADGGLGFRSVNDFNSALLAKQLWRLITVP 727