BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031374
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38123.1| unknown [Lotus japonicus]                               81   8e-14
ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [G...    80   1e-13
gb|ACU22775.1| unknown [Glycine max]                                   80   1e-13
ref|XP_003600546.1| DNA primase small subunit [Medicago truncatu...    80   2e-13
ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [V...    79   3e-13

>gb|AFK38123.1| unknown [Lotus japonicus]
          Length = 347

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/55 (74%), Positives = 42/55 (76%)
 Frame = -2

Query: 381 DMSDYDDVRYCCYGADVCLECWPLMTIAIKVIDTALRCLGADDFA*TMSERLYVY 217
           DMSDYDDVRYCC GADVCL CWPLMTIAIKVIDTALR    DDF       L+VY
Sbjct: 146 DMSDYDDVRYCCSGADVCLNCWPLMTIAIKVIDTALR----DDFG--FKHILWVY 194


>ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [Glycine max]
          Length = 434

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/55 (74%), Positives = 42/55 (76%)
 Frame = -2

Query: 381 DMSDYDDVRYCCYGADVCLECWPLMTIAIKVIDTALRCLGADDFA*TMSERLYVY 217
           DMSDYDDVRYCC GADVCL CWPLMTIAIKVIDTALR    DDF       L+VY
Sbjct: 122 DMSDYDDVRYCCSGADVCLVCWPLMTIAIKVIDTALR----DDFG--FKHILWVY 170


>gb|ACU22775.1| unknown [Glycine max]
          Length = 242

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/55 (74%), Positives = 42/55 (76%)
 Frame = -2

Query: 381 DMSDYDDVRYCCYGADVCLECWPLMTIAIKVIDTALRCLGADDFA*TMSERLYVY 217
           DMSDYDDVRYCC GADVCL CWPLMTIAIKVIDTALR    DDF       L+VY
Sbjct: 122 DMSDYDDVRYCCSGADVCLVCWPLMTIAIKVIDTALR----DDFG--FKHILWVY 170


>ref|XP_003600546.1| DNA primase small subunit [Medicago truncatula]
           gi|355489594|gb|AES70797.1| DNA primase small subunit
           [Medicago truncatula]
          Length = 433

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/55 (70%), Positives = 43/55 (78%)
 Frame = -2

Query: 381 DMSDYDDVRYCCYGADVCLECWPLMTIAIKVIDTALRCLGADDFA*TMSERLYVY 217
           DM+DYDDVRYCC GADVCL+CWPLMTIAIKVIDT+LR    DDF       L+VY
Sbjct: 121 DMTDYDDVRYCCKGADVCLDCWPLMTIAIKVIDTSLR----DDFG--FKHILWVY 169


>ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [Vitis vinifera]
          Length = 457

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/55 (69%), Positives = 44/55 (80%)
 Frame = -2

Query: 381 DMSDYDDVRYCCYGADVCLECWPLMTIAIKVIDTALRCLGADDFA*TMSERLYVY 217
           D++DYDDVRYCC GADVCL+CWPLMT+AIKVIDTALR    DDF    +  L+VY
Sbjct: 145 DITDYDDVRYCCSGADVCLDCWPLMTVAIKVIDTALR----DDFG--FNHILWVY 193