BLASTX nr result
ID: Coptis25_contig00031324
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00031324 (375 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003624321.1| Receptor protein kinase-like protein [Medica... 89 3e-16 ref|XP_003616915.1| DNA-directed RNA polymerase subunit beta [Me... 89 5e-16 ref|XP_002271708.2| PREDICTED: probable leucine-rich repeat rece... 87 1e-15 emb|CBI29039.3| unnamed protein product [Vitis vinifera] 87 1e-15 ref|XP_003559764.1| PREDICTED: probable leucine-rich repeat rece... 87 1e-15 >ref|XP_003624321.1| Receptor protein kinase-like protein [Medicago truncatula] gi|355499336|gb|AES80539.1| Receptor protein kinase-like protein [Medicago truncatula] Length = 1078 Score = 89.4 bits (220), Expect = 3e-16 Identities = 38/84 (45%), Positives = 59/84 (70%) Frame = +2 Query: 122 FHRKRKVQNSDDNGPASASKNIFSVWNYDGSIIYENVIDATNNFDDTYCIGKGGSGRVFR 301 + R RK +N D + + ++ +FS+W++DG +++EN+I+ATNNFDD Y IG GG G V++ Sbjct: 743 YRRARKTKNKDKDSNEAQAEEVFSIWSHDGKMMFENIIEATNNFDDEYLIGVGGEGSVYK 802 Query: 302 AELPTGNVVAIKMLSSQEDGKLDN 373 A+L VVA+K L S+ DG+ N Sbjct: 803 AKLSADMVVAVKKLHSRIDGERSN 826 >ref|XP_003616915.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula] gi|355518250|gb|AES99873.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula] Length = 1190 Score = 88.6 bits (218), Expect = 5e-16 Identities = 35/66 (53%), Positives = 55/66 (83%) Frame = +2 Query: 176 SKNIFSVWNYDGSIIYENVIDATNNFDDTYCIGKGGSGRVFRAELPTGNVVAIKMLSSQE 355 +++IFS+W+YDG ++YEN+I+AT +FDD Y IG+GGSG V++A LP+G V+A+K L ++ Sbjct: 874 TQDIFSIWSYDGKMVYENIIEATEDFDDKYRIGEGGSGSVYKANLPSGQVIAVKKLHAEV 933 Query: 356 DGKLDN 373 DG++ N Sbjct: 934 DGEMHN 939 >ref|XP_002271708.2| PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Vitis vinifera] Length = 868 Score = 87.4 bits (215), Expect = 1e-15 Identities = 39/74 (52%), Positives = 53/74 (71%) Frame = +2 Query: 134 RKVQNSDDNGPASASKNIFSVWNYDGSIIYENVIDATNNFDDTYCIGKGGSGRVFRAELP 313 RK + + ++ + +IFSVWNYDG I YE++I+AT +FD YCIG GG G V++A+LP Sbjct: 539 RKTRRNQTKATSTKNGDIFSVWNYDGKIAYEDIIEATEDFDIKYCIGTGGYGSVYKAQLP 598 Query: 314 TGNVVAIKMLSSQE 355 TGNVVA+K L E Sbjct: 599 TGNVVALKKLHGWE 612 >emb|CBI29039.3| unnamed protein product [Vitis vinifera] Length = 874 Score = 87.4 bits (215), Expect = 1e-15 Identities = 39/74 (52%), Positives = 53/74 (71%) Frame = +2 Query: 134 RKVQNSDDNGPASASKNIFSVWNYDGSIIYENVIDATNNFDDTYCIGKGGSGRVFRAELP 313 RK + + ++ + +IFSVWNYDG I YE++I+AT +FD YCIG GG G V++A+LP Sbjct: 545 RKTRRNQTKATSTKNGDIFSVWNYDGKIAYEDIIEATEDFDIKYCIGTGGYGSVYKAQLP 604 Query: 314 TGNVVAIKMLSSQE 355 TGNVVA+K L E Sbjct: 605 TGNVVALKKLHGWE 618 >ref|XP_003559764.1| PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710-like [Brachypodium distachyon] Length = 1232 Score = 87.0 bits (214), Expect = 1e-15 Identities = 36/64 (56%), Positives = 49/64 (76%) Frame = +2 Query: 182 NIFSVWNYDGSIIYENVIDATNNFDDTYCIGKGGSGRVFRAELPTGNVVAIKMLSSQEDG 361 N FSVWN+DG +Y+N++DAT NF DTYCIG GG+G V++A+LPTG + A+K + ED Sbjct: 925 NSFSVWNFDGEDVYKNIVDATENFSDTYCIGIGGNGSVYKAQLPTGEMFAVKKIHVMEDD 984 Query: 362 KLDN 373 +L N Sbjct: 985 ELFN 988