BLASTX nr result
ID: Coptis25_contig00031307
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00031307 (381 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containi... 167 6e-40 emb|CBI21441.3| unnamed protein product [Vitis vinifera] 167 6e-40 ref|XP_002523554.1| pentatricopeptide repeat-containing protein,... 164 7e-39 ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containi... 146 2e-33 ref|NP_001067495.1| Os11g0213500 [Oryza sativa Japonica Group] g... 137 7e-31 >ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39350-like [Vitis vinifera] Length = 634 Score = 167 bits (424), Expect = 6e-40 Identities = 77/120 (64%), Positives = 99/120 (82%) Frame = +3 Query: 9 FDSAVPVWNALINMYSKSGCVEAALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLH 188 F S +PVWNALI+MYSK GC+ A S+F+NM +D+VSWN+MIGG GM+G G ALQLL Sbjct: 422 FSSVIPVWNALIHMYSKCGCIGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLR 481 Query: 189 EMYHSGIQPNSVTFTSALSACAHSGLVTEGIQLFNSLTQEYGVTPTVGHYSCVVDLLGRA 368 +M HS + PNSVTFTSALSAC+HSGLV EG++LF+++T+++G TP + H+SCVVDLL RA Sbjct: 482 DMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARA 541 Score = 68.9 bits (167), Expect = 4e-10 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 2/114 (1%) Frame = +3 Query: 6 DFDSAVPVWNALINMYSKSGCVEAALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLL 185 +FD + V N+LI+MYSKSG V + VF M +D++SWNSMI G NG +++LL Sbjct: 156 EFD--LQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEFSVELL 213 Query: 186 HEMYHSGIQPNSVTFTSALSACAHSGLVTEGIQLFNSLTQE--YGVTPTVGHYS 341 M G +P+ VT+ + + A GL E ++F + + +T V YS Sbjct: 214 ASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYS 267 Score = 55.5 bits (132), Expect = 5e-06 Identities = 30/72 (41%), Positives = 42/72 (58%) Frame = +3 Query: 36 ALINMYSKSGCVEAALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLHEMYHSGIQP 215 AL+ MY K ++ AL+VF MD D+V+WN+MI G G AL+ +M SGI Sbjct: 334 ALLTMYVKCKRIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMN 393 Query: 216 NSVTFTSALSAC 251 N +T ++ L AC Sbjct: 394 NQITISTVLPAC 405 >emb|CBI21441.3| unnamed protein product [Vitis vinifera] Length = 832 Score = 167 bits (424), Expect = 6e-40 Identities = 77/120 (64%), Positives = 99/120 (82%) Frame = +3 Query: 9 FDSAVPVWNALINMYSKSGCVEAALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLH 188 F S +PVWNALI+MYSK GC+ A S+F+NM +D+VSWN+MIGG GM+G G ALQLL Sbjct: 620 FSSVIPVWNALIHMYSKCGCIGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLR 679 Query: 189 EMYHSGIQPNSVTFTSALSACAHSGLVTEGIQLFNSLTQEYGVTPTVGHYSCVVDLLGRA 368 +M HS + PNSVTFTSALSAC+HSGLV EG++LF+++T+++G TP + H+SCVVDLL RA Sbjct: 680 DMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARA 739 Score = 55.5 bits (132), Expect = 5e-06 Identities = 30/74 (40%), Positives = 44/74 (59%) Frame = +3 Query: 30 WNALINMYSKSGCVEAALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLHEMYHSGI 209 WN++I+ Y K ++ AL+VF MD D+V+WN+MI G G AL+ +M SGI Sbjct: 532 WNSMISGYCKR--IQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGI 589 Query: 210 QPNSVTFTSALSAC 251 N +T ++ L AC Sbjct: 590 MNNQITISTVLPAC 603 >ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 611 Score = 164 bits (415), Expect = 7e-39 Identities = 76/121 (62%), Positives = 96/121 (79%) Frame = +3 Query: 15 SAVPVWNALINMYSKSGCVEAALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLHEM 194 S V VWNA+I+MY K GCV +A ++F +M KD+VSWN+MIGG GM+G+G AAL+LL EM Sbjct: 397 SVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEM 456 Query: 195 YHSGIQPNSVTFTSALSACAHSGLVTEGIQLFNSLTQEYGVTPTVGHYSCVVDLLGRAGW 374 SGI PNS TFTS LSAC+HSGLV EG +LF S+T++Y +TP + HYSC+VD+L RAG Sbjct: 457 ILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQ 516 Query: 375 F 377 F Sbjct: 517 F 517 Score = 64.7 bits (156), Expect = 8e-09 Identities = 35/98 (35%), Positives = 54/98 (55%) Frame = +3 Query: 12 DSAVPVWNALINMYSKSGCVEAALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLHE 191 +S + V N+LI+MY K G +A VF M+ +D+ SWNSMI G NG A++LL+ Sbjct: 128 ESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNC 187 Query: 192 MYHSGIQPNSVTFTSALSACAHSGLVTEGIQLFNSLTQ 305 M G +P+ VT+ + + A G E ++ + Q Sbjct: 188 MRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQ 225 >ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350-like [Glycine max] Length = 619 Score = 146 bits (368), Expect = 2e-33 Identities = 68/122 (55%), Positives = 93/122 (76%) Frame = +3 Query: 6 DFDSAVPVWNALINMYSKSGCVEAALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLL 185 +F +PV+NALI+MYS GC+ A SVF+ M +D+VSWN++IGG G +G G AL+LL Sbjct: 402 NFSGVIPVYNALIHMYSIRGCIAYAYSVFSTMVARDLVSWNTIIGGFGTHGLGQTALELL 461 Query: 186 HEMYHSGIQPNSVTFTSALSACAHSGLVTEGIQLFNSLTQEYGVTPTVGHYSCVVDLLGR 365 EM SG++P+ VTF+ ALSAC+HSGLV EGI+LF +T+++ +TP H+SCVVD+L R Sbjct: 462 QEMSGSGVRPDLVTFSCALSACSHSGLVNEGIELFYRMTKDFSMTPAREHFSCVVDMLAR 521 Query: 366 AG 371 AG Sbjct: 522 AG 523 Score = 58.9 bits (141), Expect = 4e-07 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 2/108 (1%) Frame = +3 Query: 12 DSAVPVWNALINMYSKSGCVEAALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLHE 191 +S + V N++++MYSK G V +A VF M +D+ SWNSM+ G NG A+++L Sbjct: 135 ESNLQVRNSVLDMYSKCGDVGSARQVFDEMSERDVFSWNSMMSGYVWNGLPHKAVEVLGV 194 Query: 192 MYHS--GIQPNSVTFTSALSACAHSGLVTEGIQLFNSLTQEYGVTPTV 329 M G +P+ VT+ + + A G E ++F + ++ T+ Sbjct: 195 MKKDGCGCEPDVVTWNTVMDAYCRMGQCCEASRVFGEIEDPNVISWTI 242 >ref|NP_001067495.1| Os11g0213500 [Oryza sativa Japonica Group] gi|77549336|gb|ABA92133.1| pentatricopeptide, putative [Oryza sativa Japonica Group] gi|113644717|dbj|BAF27858.1| Os11g0213500 [Oryza sativa Japonica Group] gi|125576589|gb|EAZ17811.1| hypothetical protein OsJ_33354 [Oryza sativa Japonica Group] Length = 470 Score = 137 bits (346), Expect = 7e-31 Identities = 64/121 (52%), Positives = 89/121 (73%) Frame = +3 Query: 9 FDSAVPVWNALINMYSKSGCVEAALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLH 188 FDS + V NALINMY+K G V + +VF+ M +D+VSW++MI ++G G AL++ Sbjct: 238 FDSDIAVGNALINMYAKCGRVNVSQAVFSGMQQRDVVSWSTMIHSYSIHGKGEQALKVYM 297 Query: 189 EMYHSGIQPNSVTFTSALSACAHSGLVTEGIQLFNSLTQEYGVTPTVGHYSCVVDLLGRA 368 EM G++PN +TFTS LS+C+HSGLVTEG ++F S+T+ +GV P HY+C+VDLLGRA Sbjct: 298 EMLSEGVKPNWITFTSVLSSCSHSGLVTEGRKIFESMTKVHGVHPAAEHYACMVDLLGRA 357 Query: 369 G 371 G Sbjct: 358 G 358