BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031279
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   133   2e-29
ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ...   114   1e-23
ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase H...   110   1e-22
ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   110   1e-22
ref|XP_002317947.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16

>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Vitis vinifera]
          Length = 1231

 Score =  133 bits (334), Expect = 2e-29
 Identities = 74/203 (36%), Positives = 115/203 (56%), Gaps = 34/203 (16%)
 Frame = +1

Query: 4   LDEKGYEKVVKVMDRVNCLCDAKSLECLISKLLGFSYGKS---------CHCPVWLKKLL 156
           LD++  E +++V++ VNCL D +S  C++ + +G +YG +         C CP WLKK++
Sbjct: 170 LDKQNCEILIRVLESVNCLLDMRSGSCMLLREVGLAYGDATQSGSKSSLCLCPAWLKKIM 229

Query: 157 KVFSFLNIFSGFLQMQSVDVTCDRLNGAMKKLGVFGLDLCIEDVKQLSVLCPKIVRIGTY 336
           K F+FLNIFS FLQ+Q   +T   L   +  LG FG  + +ED++ LSVLCPK+V I  Y
Sbjct: 230 KTFTFLNIFSAFLQLQQGHITLIHLKEGLDHLGEFGFQVDMEDIEHLSVLCPKLVEICVY 289

Query: 337 EN------------------------VPIK-LGDAIVIVDSSKDVGGQSDSVNNVRTVRK 441
           ++                        +P + LGD +++++SS     Q +  +N RT +K
Sbjct: 290 DDFLSGYVILISAWFCLKVVHFATNGMPSRNLGDNLIVINSSTQHKDQVE--DNSRTAQK 347

Query: 442 QISTSTIVNAIKKREAGFKEHLW 510
           Q+  S IV+ +KK E+ FK HLW
Sbjct: 348 QVPISKIVSVMKKLESCFKTHLW 370


>ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 1189

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/173 (35%), Positives = 98/173 (56%), Gaps = 3/173 (1%)
 Frame = +1

Query: 1   VLDEKGYEKVVKVMDRVNCLCDAKSLECLISKLLGFSYGKS---CHCPVWLKKLLKVFSF 171
           +LD+   EK V+V++ +NCL  + S  C++    G + G++   C CP WLK+ ++ F+F
Sbjct: 159 ILDDSNCEKFVEVLESLNCLTSSHSGICVLVANSGDN-GEAEVLCLCPEWLKRTMQAFAF 217

Query: 172 LNIFSGFLQMQSVDVTCDRLNGAMKKLGVFGLDLCIEDVKQLSVLCPKIVRIGTYENVPI 351
           LNI S +LQM   ++T   L   +K+LG FG +   ED++ +S+LCPK+V         +
Sbjct: 218 LNILSAYLQMHKEEITSAHLKEVLKQLGRFGFNAGFEDIEHISILCPKVVSFANNSTEFV 277

Query: 352 KLGDAIVIVDSSKDVGGQSDSVNNVRTVRKQISTSTIVNAIKKREAGFKEHLW 510
              DA+VI++S  +     D        +K +S S I   ++KRE+ FK HLW
Sbjct: 278 NSADALVIINSELE---DRDEFVIPGNGQKAMSLSKIFTTMRKRESSFKSHLW 327


>ref|XP_004168162.1| PREDICTED: putative ATP-dependent helicase HRQ1-like, partial
           [Cucumis sativus]
          Length = 489

 Score =  110 bits (275), Expect = 1e-22
 Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
 Frame = +1

Query: 4   LDEKGYEKVVKVMDRVNCLCDAKSLECLISK----------LLGFSYGKSCHCPVWLKKL 153
           L+E+  E  +K ++ V+CL D ++  C+++K           L  + G SC CP+WLKK+
Sbjct: 196 LNEQTGESFIKFLESVDCLTDPRNGNCMLAKQANSRSGNKKALNSTRGSSCICPIWLKKI 255

Query: 154 LKVFSFLNIFSGFLQMQSVDVTCDRLNGAMKKLGVFGLDLCIEDVKQLSVLCPKIVRIGT 333
           +K FSFLN+FS FLQ+Q   +T  RL  A  +L    L  C+ED+  LS LCPK V   +
Sbjct: 256 MKAFSFLNVFSMFLQLQEEIMTVSRLEQATDQLQKRRLMFCMEDIHNLSRLCPKAVHFAS 315

Query: 334 YENVPIKLGDAIVIVDSSKDVGGQSDSVNNVRTVRKQISTSTIVNAIKKREAGFKEHLW 510
                 ++   I+I+  ++  G   + ++N        + S  VN +K+RE  FK +LW
Sbjct: 316 GRLEDTRVDKLIIIIYLTEKNGQPKEDIDN--------TVSMDVNPLKRRERSFKLYLW 366


>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Cucumis sativus]
          Length = 1218

 Score =  110 bits (275), Expect = 1e-22
 Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
 Frame = +1

Query: 4   LDEKGYEKVVKVMDRVNCLCDAKSLECLISK----------LLGFSYGKSCHCPVWLKKL 153
           L+E+  E  +K ++ V+CL D ++  C+++K           L  + G SC CP+WLKK+
Sbjct: 196 LNEQTGESFIKFLESVDCLTDPRNGSCMLAKQANSRSGNKKALNSTRGSSCICPIWLKKI 255

Query: 154 LKVFSFLNIFSGFLQMQSVDVTCDRLNGAMKKLGVFGLDLCIEDVKQLSVLCPKIVRIGT 333
           +K FSFLN+FS FLQ+Q   +T  RL  A  +L    L  C+ED+  LS LCPK V   +
Sbjct: 256 MKAFSFLNVFSMFLQLQEEIMTVSRLEQATDQLQKRRLMFCMEDIHNLSRLCPKAVHFAS 315

Query: 334 YENVPIKLGDAIVIVDSSKDVGGQSDSVNNVRTVRKQISTSTIVNAIKKREAGFKEHLW 510
                 ++   I+I+  ++  G   + ++N        + S  VN +K+RE  FK +LW
Sbjct: 316 GRLEDTRVDKLIIIIYLTEKNGRPKEDIDN--------TVSMDVNPLKRRERSFKLYLW 366


>ref|XP_002317947.1| predicted protein [Populus trichocarpa] gi|222858620|gb|EEE96167.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
 Frame = +1

Query: 7   DEKGYEKVVKVMDRVNCLCDAKSLECLISKLLGFSYGK--SCHCPVWLKKLLKVFSFLNI 180
           D+   EK V+V+D  +CL +  S  C+   L G    K  SC CP WLK++++ F+FLNI
Sbjct: 152 DKTKCEKFVEVLDSFSCLTNPHSRTCVFLDL-GLCGDKRPSCFCPAWLKRIMQAFAFLNI 210

Query: 181 FSGFLQMQSVDVTCDRLNGAMKKLGVFGLDLCIEDVKQLSVLCPKIV 321
           F+ FLQMQ  ++T D L  A+K L   GL    ED++ LSVL PK++
Sbjct: 211 FTAFLQMQRREITSDSLKDALKNLAKSGLKAGFEDIELLSVLYPKVI 257