BLASTX nr result

ID: Coptis25_contig00031252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031252
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271161.2| PREDICTED: LOW QUALITY PROTEIN: probable LRR...   102   4e-20
emb|CBI32004.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_002520123.1| Serine/threonine-protein kinase PBS1, putati...   100   2e-19
ref|XP_002326495.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_003532052.1| PREDICTED: probable LRR receptor-like serine...    97   1e-18

>ref|XP_002271161.2| PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like
           serine/threonine-protein kinase At1g14390 [Vitis
           vinifera]
          Length = 746

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/88 (53%), Positives = 64/88 (72%)
 Frame = -3

Query: 264 QGQLYKGCTRGGSTVVVRCMKXXXXXXXXXXXXHMEVISKLRHRHLVSLLGHCIVTHQDY 85
           QGQ YKG  R GS V+V+C+K             ME ++KLRH+HLVS+LGHCIVT+Q++
Sbjct: 464 QGQSYKGWLRDGSEVLVKCLKLKHKHSPQSLPQQMEAVTKLRHQHLVSVLGHCIVTYQEH 523

Query: 84  SNETNTMFLVFEYVSNSTLRNHLTDRRK 1
            N  +T+FLV E+V+N +LR+HLTDRR+
Sbjct: 524 PNTASTVFLVVEHVANGSLRDHLTDRRR 551


>emb|CBI32004.3| unnamed protein product [Vitis vinifera]
          Length = 720

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/88 (53%), Positives = 64/88 (72%)
 Frame = -3

Query: 264 QGQLYKGCTRGGSTVVVRCMKXXXXXXXXXXXXHMEVISKLRHRHLVSLLGHCIVTHQDY 85
           QGQ YKG  R GS V+V+C+K             ME ++KLRH+HLVS+LGHCIVT+Q++
Sbjct: 438 QGQSYKGWLRDGSEVLVKCLKLKHKHSPQSLPQQMEAVTKLRHQHLVSVLGHCIVTYQEH 497

Query: 84  SNETNTMFLVFEYVSNSTLRNHLTDRRK 1
            N  +T+FLV E+V+N +LR+HLTDRR+
Sbjct: 498 PNTASTVFLVVEHVANGSLRDHLTDRRR 525


>ref|XP_002520123.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
           gi|223540615|gb|EEF42178.1| Serine/threonine-protein
           kinase PBS1, putative [Ricinus communis]
          Length = 749

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/88 (55%), Positives = 63/88 (71%)
 Frame = -3

Query: 264 QGQLYKGCTRGGSTVVVRCMKXXXXXXXXXXXXHMEVISKLRHRHLVSLLGHCIVTHQDY 85
           QGQLYKG  R G+ V+V+C+K            HMEV+SKLRH HLVS+LGHCIVT+QD+
Sbjct: 472 QGQLYKGWLRDGAVVLVKCVKLKQKNLPQSLVQHMEVLSKLRHLHLVSVLGHCIVTYQDH 531

Query: 84  SNETNTMFLVFEYVSNSTLRNHLTDRRK 1
                T+F+V E+VSN +L ++LTDRRK
Sbjct: 532 PRTATTVFVVLEHVSNGSLSDYLTDRRK 559


>ref|XP_002326495.1| predicted protein [Populus trichocarpa] gi|222833817|gb|EEE72294.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 47/88 (53%), Positives = 62/88 (70%)
 Frame = -3

Query: 264 QGQLYKGCTRGGSTVVVRCMKXXXXXXXXXXXXHMEVISKLRHRHLVSLLGHCIVTHQDY 85
           QGQLYKGC   GS V+V+C+K             +EV+SKLRH HLVS+LGH IVT+QD+
Sbjct: 461 QGQLYKGCLIDGSVVLVKCVKLKQKNLPQSMIQQIEVLSKLRHLHLVSILGHTIVTYQDH 520

Query: 84  SNETNTMFLVFEYVSNSTLRNHLTDRRK 1
           S+   T+F+V E+VSN +LR++L D RK
Sbjct: 521 SSTAGTVFVVLEHVSNGSLRDYLADERK 548


>ref|XP_003532052.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g14390-like [Glycine max]
          Length = 570

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/88 (50%), Positives = 61/88 (69%)
 Frame = -3

Query: 264 QGQLYKGCTRGGSTVVVRCMKXXXXXXXXXXXXHMEVISKLRHRHLVSLLGHCIVTHQDY 85
           QGQLYKG  R GS V+V C+K             +EV+  LRHRH+VS+LGHC++T Q++
Sbjct: 294 QGQLYKGWLRDGSVVLVNCVKIKQKGLPHSIMQQVEVLHNLRHRHMVSVLGHCVITEQEH 353

Query: 84  SNETNTMFLVFEYVSNSTLRNHLTDRRK 1
              T+T+F+VFEY+SN +LR+ L+D RK
Sbjct: 354 PQTTSTVFIVFEYISNVSLRDQLSDGRK 381


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