BLASTX nr result

ID: Coptis25_contig00031247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031247
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314913.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002514580.1| DNA-3-methyladenine glycosylase, putative [R...   132   2e-29
ref|XP_002267123.1| PREDICTED: probable GMP synthase [glutamine-...   132   3e-29
ref|NP_001175638.1| Os08g0489300 [Oryza sativa Japonica Group] g...   132   4e-29
ref|XP_004135425.1| PREDICTED: probable GMP synthase [glutamine-...   131   5e-29

>ref|XP_002314913.1| predicted protein [Populus trichocarpa] gi|222863953|gb|EEF01084.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  134 bits (337), Expect = 8e-30
 Identities = 64/97 (65%), Positives = 76/97 (78%)
 Frame = -2

Query: 297 NSDKAYVQYHDESWGVPVYDDIQLFELLALSGMLMYHLWAEIVKRKEMYREAFAKFDPNV 118
           NSDK YV +HDE WGVPVYDD QLFELLALSGMLM + W EI+KRKE++REAF  FDPN+
Sbjct: 129 NSDKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREAFEGFDPNI 188

Query: 117 VAKMXXXXXXXXXSNKDLAIVESQVRCIVDNAKCLLQ 7
           VAKM         SNK + + ES+VRCIVDN+KC+L+
Sbjct: 189 VAKMGEKEIMEIASNKAIMLAESRVRCIVDNSKCILK 225


>ref|XP_002514580.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
           gi|223546184|gb|EEF47686.1| DNA-3-methyladenine
           glycosylase, putative [Ricinus communis]
          Length = 319

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/98 (64%), Positives = 76/98 (77%)
 Frame = -2

Query: 297 NSDKAYVQYHDESWGVPVYDDIQLFELLALSGMLMYHLWAEIVKRKEMYREAFAKFDPNV 118
           NSDK YV +HDE WGVPVYDD QLFELLALSGMLM + W EI+KRK+++REAFA FDPN+
Sbjct: 131 NSDKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKQLFREAFAGFDPNI 190

Query: 117 VAKMXXXXXXXXXSNKDLAIVESQVRCIVDNAKCLLQI 4
           VA M         SNK + + +S+VRCIVDNAKC+ +I
Sbjct: 191 VANMGEKEILDIASNKAIMLADSRVRCIVDNAKCIAKI 228


>ref|XP_002267123.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Vitis vinifera]
          Length = 318

 Score =  132 bits (332), Expect = 3e-29
 Identities = 64/99 (64%), Positives = 77/99 (77%)
 Frame = -2

Query: 297 NSDKAYVQYHDESWGVPVYDDIQLFELLALSGMLMYHLWAEIVKRKEMYREAFAKFDPNV 118
           NSDK YVQ+HDE WGVPVY+D QLFELLA+SGMLM + W EI+KRKE+ R+AF+ FDPN 
Sbjct: 120 NSDKVYVQFHDECWGVPVYEDNQLFELLAMSGMLMDYNWTEILKRKELLRDAFSGFDPNT 179

Query: 117 VAKMXXXXXXXXXSNKDLAIVESQVRCIVDNAKCLLQIV 1
           VA+M         SNK L + ES+VRCIVDNAKC+ +IV
Sbjct: 180 VAQMGEKEITETASNKALMLAESRVRCIVDNAKCIQKIV 218


>ref|NP_001175638.1| Os08g0489300 [Oryza sativa Japonica Group]
           gi|42408272|dbj|BAD09428.1| putative 3-methyladenine-DNA
           glycosylase [Oryza sativa Japonica Group]
           gi|42408477|dbj|BAD09657.1| putative 3-methyladenine-DNA
           glycosylase [Oryza sativa Japonica Group]
           gi|215737689|dbj|BAG96819.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218201359|gb|EEC83786.1| hypothetical protein
           OsI_29689 [Oryza sativa Indica Group]
           gi|222640771|gb|EEE68903.1| hypothetical protein
           OsJ_27747 [Oryza sativa Japonica Group]
           gi|255678544|dbj|BAH94366.1| Os08g0489300 [Oryza sativa
           Japonica Group]
          Length = 339

 Score =  132 bits (331), Expect = 4e-29
 Identities = 60/98 (61%), Positives = 77/98 (78%)
 Frame = -2

Query: 297 NSDKAYVQYHDESWGVPVYDDIQLFELLALSGMLMYHLWAEIVKRKEMYREAFAKFDPNV 118
           NSD+AYVQ+HDE WGVPVY+D +LFELLALSGML+ H W EI+KR++MYREAFA FDP+ 
Sbjct: 147 NSDEAYVQFHDECWGVPVYNDNRLFELLALSGMLIDHNWTEILKRRDMYREAFADFDPST 206

Query: 117 VAKMXXXXXXXXXSNKDLAIVESQVRCIVDNAKCLLQI 4
           VAKM          NK+L + E +VRCI++NAKC+ ++
Sbjct: 207 VAKMDENDVAEISGNKELKLAECRVRCIIENAKCIQKV 244


>ref|XP_004135425.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Cucumis sativus] gi|449531521|ref|XP_004172734.1|
           PREDICTED: probable GMP synthase
           [glutamine-hydrolyzing]-like [Cucumis sativus]
          Length = 308

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/97 (65%), Positives = 78/97 (80%)
 Frame = -2

Query: 294 SDKAYVQYHDESWGVPVYDDIQLFELLALSGMLMYHLWAEIVKRKEMYREAFAKFDPNVV 115
           SDKAYV +HDE WGVPVYDD +LFELLALSGMLM + W EIVKR+E++REAFA F+P+VV
Sbjct: 121 SDKAYVSFHDECWGVPVYDDNRLFELLALSGMLMDYNWTEIVKRRELFREAFAGFEPSVV 180

Query: 114 AKMXXXXXXXXXSNKDLAIVESQVRCIVDNAKCLLQI 4
           A M         S+K + +VES+VRCIVDNAKC+L+I
Sbjct: 181 ANMGEKEITDVASDKAIMLVESRVRCIVDNAKCILKI 217


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