BLASTX nr result

ID: Coptis25_contig00031246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031246
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN97178.1| MYB transcription factor [Populus trichocarpa]         266   2e-69
ref|XP_002279279.1| PREDICTED: myb-related protein B [Vitis vini...   265   5e-69
emb|CAN83952.1| hypothetical protein VITISV_022615 [Vitis vinifera]   265   5e-69
ref|XP_002318324.1| predicted protein [Populus trichocarpa] gi|2...   263   2e-68
ref|XP_002329751.1| predicted protein [Populus trichocarpa] gi|2...   256   2e-66

>gb|ACN97178.1| MYB transcription factor [Populus trichocarpa]
          Length = 236

 Score =  266 bits (681), Expect = 2e-69
 Identities = 134/197 (68%), Positives = 159/197 (80%), Gaps = 4/197 (2%)
 Frame = +1

Query: 1   EKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLLASHR 180
           EKL+ELVE YGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINR+PFTEEEEERLLASHR
Sbjct: 13  EKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHR 72

Query: 181 IHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKHEM 360
           IHGNRW++IARLFPGRTDNAVKNHWHVIMARR RERSR +AKR AQ+L++ +K  SK +M
Sbjct: 73  IHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERSRLHAKRTAQALVNEQKFSSKQDM 132

Query: 361 GMKIEHRNHSS-IREYYERCSDPIIYNHH---ANLKNIYSPVPNYSPAIDKNDPVEFYDF 528
            +  E R+ SS +++Y E+     +  H    A  K  Y+   + S   D+N P+EFYDF
Sbjct: 133 QINCETRSFSSFVKKYCEKFGQYPLITHSYLPAFWKEFYN--DDLSNCEDQNRPIEFYDF 190

Query: 529 LQVNTDSNRSEVINHAR 579
           LQVNT+SN+SEVI++AR
Sbjct: 191 LQVNTESNKSEVIDNAR 207


>ref|XP_002279279.1| PREDICTED: myb-related protein B [Vitis vinifera]
           gi|297734369|emb|CBI15616.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  265 bits (677), Expect = 5e-69
 Identities = 138/195 (70%), Positives = 152/195 (77%), Gaps = 2/195 (1%)
 Frame = +1

Query: 1   EKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLLASHR 180
           EKLRELVE +GPHNWNAIAEKL GRSGKSCRLRWFNQLDPRINR PFTEEEEERLLASHR
Sbjct: 13  EKLRELVERHGPHNWNAIAEKLPGRSGKSCRLRWFNQLDPRINRAPFTEEEEERLLASHR 72

Query: 181 IHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKHEM 360
           IHGNRW++IARLFPGRTDNAVKNHWHVIMARRCRE+S+FYAKRAAQS I+ RKS+SK + 
Sbjct: 73  IHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCREKSKFYAKRAAQSWINERKSISKPDR 132

Query: 361 GMKI--EHRNHSSIREYYERCSDPIIYNHHANLKNIYSPVPNYSPAIDKNDPVEFYDFLQ 534
              I  + RN SS   Y E C + +I  H   +              D+  PVEFYDFL 
Sbjct: 133 QQMIGCDTRNLSS---YVENCYENMI--HCTKMLE------------DRTQPVEFYDFLN 175

Query: 535 VNTDSNRSEVINHAR 579
           VNTDSNRSEVI+HAR
Sbjct: 176 VNTDSNRSEVIDHAR 190


>emb|CAN83952.1| hypothetical protein VITISV_022615 [Vitis vinifera]
          Length = 371

 Score =  265 bits (677), Expect = 5e-69
 Identities = 138/195 (70%), Positives = 152/195 (77%), Gaps = 2/195 (1%)
 Frame = +1

Query: 1   EKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLLASHR 180
           EKLRELVE +GPHNWNAIAEKL GRSGKSCRLRWFNQLDPRINR PFTEEEEERLLASHR
Sbjct: 13  EKLRELVERHGPHNWNAIAEKLPGRSGKSCRLRWFNQLDPRINRAPFTEEEEERLLASHR 72

Query: 181 IHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKHEM 360
           IHGNRW++IARLFPGRTDNAVKNHWHVIMARRCRE+S+FYAKRAAQS I+ RKS+SK + 
Sbjct: 73  IHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCREKSKFYAKRAAQSWINERKSISKPDR 132

Query: 361 GMKI--EHRNHSSIREYYERCSDPIIYNHHANLKNIYSPVPNYSPAIDKNDPVEFYDFLQ 534
              I  + RN SS   Y E C + +I  H   +              D+  PVEFYDFL 
Sbjct: 133 QQMIGCDTRNLSS---YVENCYENMI--HCTKMLE------------DRTQPVEFYDFLN 175

Query: 535 VNTDSNRSEVINHAR 579
           VNTDSNRSEVI+HAR
Sbjct: 176 VNTDSNRSEVIDHAR 190


>ref|XP_002318324.1| predicted protein [Populus trichocarpa] gi|222858997|gb|EEE96544.1|
           predicted protein [Populus trichocarpa]
           gi|225626259|gb|ACN97179.1| MYB transcription factor
           [Populus trichocarpa]
          Length = 243

 Score =  263 bits (672), Expect = 2e-68
 Identities = 136/198 (68%), Positives = 157/198 (79%), Gaps = 5/198 (2%)
 Frame = +1

Query: 1   EKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLLASHR 180
           EKL+ELVE YGPHNWNAIAEKL GRSGKSCRLRWFNQLDPRINR+PFTEEEEERLLASHR
Sbjct: 13  EKLKELVEKYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHR 72

Query: 181 IHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKHE- 357
           IHGNRW+IIAR FPGRTDNAVKNHWHVIMARR RERSR +AKRAAQ+L++  K  SK + 
Sbjct: 73  IHGNRWAIIARFFPGRTDNAVKNHWHVIMARRYRERSRLHAKRAAQTLVNDNKLSSKQDH 132

Query: 358 MGMKIEHRNHSSI-REYYERCSDPIIYNHH---ANLKNIYSPVPNYSPAIDKNDPVEFYD 525
           M M  E RN SS  ++Y E+     +  H    A  K  Y+  P++    D++ P+EFYD
Sbjct: 133 MHMDCETRNFSSFSKKYCEKYGQYPMVTHSYLPAFCKEFYNEDPSHCE--DQSRPIEFYD 190

Query: 526 FLQVNTDSNRSEVINHAR 579
           FLQVNTDSN+SEVI++AR
Sbjct: 191 FLQVNTDSNKSEVIDNAR 208


>ref|XP_002329751.1| predicted protein [Populus trichocarpa] gi|222870659|gb|EEF07790.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  256 bits (655), Expect = 2e-66
 Identities = 128/193 (66%), Positives = 147/193 (76%)
 Frame = +1

Query: 1   EKLRELVEMYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRNPFTEEEEERLLASHR 180
           EKL+ELVE YGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINR+PFTEEEEERLLASHR
Sbjct: 13  EKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLLASHR 72

Query: 181 IHGNRWSIIARLFPGRTDNAVKNHWHVIMARRCRERSRFYAKRAAQSLISGRKSVSKHEM 360
           IHGNRW++IARLFPGRTDNAVKNHWHVIMARR RERSR +AKR AQ+L++ +K  SK +M
Sbjct: 73  IHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERSRLHAKRTAQALVNEQKFSSKQDM 132

Query: 361 GMKIEHRNHSSIREYYERCSDPIIYNHHANLKNIYSPVPNYSPAIDKNDPVEFYDFLQVN 540
            +  E R+ SS                      +      Y    D+N P+EFYDFLQVN
Sbjct: 133 QINCETRSFSSFL--------------------LLLMFLTYMAIADQNRPIEFYDFLQVN 172

Query: 541 TDSNRSEVINHAR 579
           T+SN+SEVI++AR
Sbjct: 173 TESNKSEVIDNAR 185


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