BLASTX nr result
ID: Coptis25_contig00031242
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00031242
(1271 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281970.1| PREDICTED: U-box domain-containing protein 2... 428 e-117
ref|XP_003630199.1| U-box domain-containing protein [Medicago tr... 395 e-108
ref|XP_004168123.1| PREDICTED: U-box domain-containing protein 2... 394 e-107
ref|XP_004148672.1| PREDICTED: U-box domain-containing protein 2... 394 e-107
ref|XP_003531405.1| PREDICTED: U-box domain-containing protein 2... 389 e-106
>ref|XP_002281970.1| PREDICTED: U-box domain-containing protein 27 [Vitis vinifera]
Length = 412
Score = 428 bits (1101), Expect = e-117
Identities = 238/414 (57%), Positives = 300/414 (72%), Gaps = 17/414 (4%)
Frame = +2
Query: 17 MVRNDLFITVPSFFKCPISLDVMKSPVSLCTGVTYDRSSIQAWLDNGNNTCPATMQVLNS 196
MVR++LFITVPS F+CPISLDVMKSPVSLCTGVTYDRSSIQ WLDNGNNTCPATMQVL+S
Sbjct: 1 MVRDNLFITVPSLFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLHS 60
Query: 197 KDFVPNHNLHRLIQIWSNSDSQSQNC---------LISRQEIRDLVNKIESCSDDEFK-- 343
KDFVPNH L RLIQIWSNS N +S + RDL+ +IES +D +
Sbjct: 61 KDFVPNHTLQRLIQIWSNSVRHRSNSPDSPIQLVPSLSPDQARDLIKEIESKPEDCLECM 120
Query: 344 -EIIEFAKVSDENLKFLACLEGFVLVLVDVL-SRNEELKKKEQVIRVLELVSIEYIDKDR 517
+II FA+ S+E+ KFLA ++GFV +LVD L S N EQV+RVL+++ E+ D +
Sbjct: 121 SKIICFARESEESRKFLARIDGFVSLLVDFLGSGNANFLALEQVVRVLDMIISEHEDHKQ 180
Query: 518 L----FAKNQNLLASILLVLRQGSFDSRISSLRVLEFIASINTESKLHIAETQGILTEVI 685
L +++ L+SILLVL+QGS +SRI+S RVLE IA I+ ESKL IAE G+ +E+I
Sbjct: 181 LANSMLKSDRDCLSSILLVLQQGSAESRIASARVLESIA-IDAESKLLIAEKDGLFSELI 239
Query: 686 HLIGSETDTIMIEAGLSCLIAISSHRRIKVKIVRFGLVQRLGKLLARXXXXXXXXXXXXX 865
++ +ETD MIE+ LSCLIA+S RRI+ KIVR G+V++L KLL+
Sbjct: 240 RIMSTETDPTMIESTLSCLIAVSMPRRIRPKIVRLGVVKQLTKLLS-DPNWSVSVTEKAL 298
Query: 866 XXXXXXXTCTEGRTAICADTMTVTAIIEKMLKVSNVSTEHAVVILWSVCYLFRDQTAQEN 1045
+C EG++ IC ++ V+AI++KMLKVS+ +TEHAV ILWSVCYL RD AQ
Sbjct: 299 KLLEMASSCKEGKSEICENSDCVSAIVQKMLKVSSTATEHAVTILWSVCYLSRDDRAQST 358
Query: 1046 VMKGNGLTKILLIMQSNCSPSVRQMCGDLMKIFKVNSKSCLSCYDTKTTHIMPF 1207
V + NGLTKIL++MQSNCSP+VRQ+ GDL+KIF+V+SKSCLS YDTKTTHIMPF
Sbjct: 359 VTQNNGLTKILVLMQSNCSPAVRQLAGDLLKIFRVSSKSCLSSYDTKTTHIMPF 412
>ref|XP_003630199.1| U-box domain-containing protein [Medicago truncatula]
gi|357519901|ref|XP_003630239.1| U-box domain-containing
protein [Medicago truncatula] gi|355524221|gb|AET04675.1|
U-box domain-containing protein [Medicago truncatula]
gi|355524261|gb|AET04715.1| U-box domain-containing
protein [Medicago truncatula]
Length = 418
Score = 395 bits (1016), Expect = e-108
Identities = 226/419 (53%), Positives = 284/419 (67%), Gaps = 22/419 (5%)
Frame = +2
Query: 17 MVRNDLFITVPSFFKCPISLDVMKSPVSLCTGVTYDRSSIQAWLDNGNNTCPATMQVLNS 196
MVR+DL ITVPS F+CPISLDVMKSPVSLCTGVTYDRSSIQ WLDNGNNTCPATMQ+L +
Sbjct: 1 MVRDDLCITVPSLFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQILQT 60
Query: 197 KDFVPNHNLHRLIQIWSNS-----DSQ----SQNCLISRQEIRDLVNKIESCSDDEFK-- 343
KDFVPN L RLIQIWS+S DS S + R ++ + ES S+++F
Sbjct: 61 KDFVPNRTLQRLIQIWSDSVRHRVDSPESPLSTESVDRRDQLIVAITDFESGSENQFDSL 120
Query: 344 -EIIEFAKVSDENLKFLACLEGFVLVLVDVLSR-----NEELKKKEQVIRVLELV----- 490
+I+ FAK S+EN FLA EGFV VLV L ++ EQV+ L+LV
Sbjct: 121 VKIVRFAKDSEENCVFLAKTEGFVCVLVSFLDNVDGGVERSVELLEQVVIALDLVLCKIE 180
Query: 491 SIEYIDKDRLFAKNQNLLASILLVLRQGSFDSRISSLRVLEFIASINTESKLHIAETQGI 670
+ E I K + +++++L S+LLVL+QGS +S+I+S+RVL+FIA ++ ESKL +AE +G+
Sbjct: 181 NRESILKSKKENESKSILDSLLLVLQQGSCESKIASVRVLKFIA-VDAESKLLVAEKEGL 239
Query: 671 LTEVIHLIGSETDTIMIEAGLSCLIAISSHRRIKVKIVRFGLVQRLGKLLARXXXXXXXX 850
L+E+++ I + D ++E LSCL+AIS+ +R K K+V G V+ LL
Sbjct: 240 LSELLNQITPKKDQNLMENALSCLVAISTPKRNKAKLVHLGAVKVFSNLLTASPSLCVSV 299
Query: 851 XXXXXXXXXXXXTCTEGRTAICADTMTVTAIIEKMLKVSNVSTEHAVVILWSVCYLFRDQ 1030
+ EGR+ IC V AI+ K+LKVS V+TEHAV ILWSVCYLFRDQ
Sbjct: 300 TEKVLKLLETVSSTKEGRSEICEAPSCVVAIVNKVLKVSTVATEHAVTILWSVCYLFRDQ 359
Query: 1031 TAQENVMKGNGLTKILLIMQSNCSPSVRQMCGDLMKIFKVNSKSCLSCYDTKTTHIMPF 1207
AQE V K NGLTKILL+MQSNCSP VRQM DL+KIF+VNSKSCLS YDTKTTHIMPF
Sbjct: 360 KAQEAVTKANGLTKILLLMQSNCSPQVRQMSVDLLKIFRVNSKSCLSSYDTKTTHIMPF 418
>ref|XP_004168123.1| PREDICTED: U-box domain-containing protein 27-like [Cucumis sativus]
Length = 404
Score = 394 bits (1013), Expect = e-107
Identities = 214/407 (52%), Positives = 285/407 (70%), Gaps = 11/407 (2%)
Frame = +2
Query: 17 MVRNDLFITVPSFFKCPISLDVMKSPVSLCTGVTYDRSSIQAWLDNGNNTCPATMQVLNS 196
MV++DL IT+P+ F+CPISLDVMKSPVSLCTGVTYDRSSIQ WLDNGNNTCPATMQVL +
Sbjct: 1 MVKDDLCITIPTDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
Query: 197 KDFVPNHNLHRLIQIWSNSDSQ------SQNCLISRQEIRDLVNKIESCSDDEFKEIIEF 358
KDFVPNHNLHRLIQIWS+S Q S + L S Q +R L+N D ++ F
Sbjct: 61 KDFVPNHNLHRLIQIWSDSLHQRLHSPLSDSSLSSDQLLR-LIN--HQSRPDSLPRLLSF 117
Query: 359 AKVSDENLKFLACLEGFVLVLVDVLSRNEELKKKEQVIRVLELVSIEYIDKDR----LFA 526
A S +N + L+ ++G + +LVD+L +Q +R+L L+ E DK+R +
Sbjct: 118 ASESLDNRRLLSGIDGLLPLLVDLLCNVHAGDLLDQAVRLLHLIRTEIGDKERFVKTILN 177
Query: 527 KNQNLLASILLVLRQGSFDSRISSLRVLEFIASINTESKLHIAETQGILTEVIHLIGSET 706
++N ++S+LL+LR+G+ + +I S +LE++A I+ E+K+ IAET G++ E++ LI S+
Sbjct: 178 TDRNSISSLLLILRKGTVELKICSANLLEYLA-IDAEAKILIAETDGLMQELLKLINSQN 236
Query: 707 DTIMIEAGLSCLIAISSHRRIKVKIVRFGLVQRLGKLLARXXXXXXXXXXXXXXXXXXXX 886
DT +IE+ LSCLI+IS +RIK+K+V+ G+++ + KLL+
Sbjct: 237 DTTLIESVLSCLISISMPKRIKIKLVQLGVIKSVTKLLSESNSSSSSSMTEKLLKVLETA 296
Query: 887 -TCTEGRTAICADTMTVTAIIEKMLKVSNVSTEHAVVILWSVCYLFRDQTAQENVMKGNG 1063
T EGRT I D++ V AI++K+LKVSN +TEHAV LWSVCYLFRD+ A E + K NG
Sbjct: 297 STVREGRTEIGEDSVCVAAIVQKVLKVSNAATEHAVTTLWSVCYLFRDEKAGEALTKANG 356
Query: 1064 LTKILLIMQSNCSPSVRQMCGDLMKIFKVNSKSCLSCYDTKTTHIMP 1204
LTKILL+MQSNCSP VRQM DL+KIF++NSKSCLS YDTKTTHIMP
Sbjct: 357 LTKILLLMQSNCSPPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMP 403
>ref|XP_004148672.1| PREDICTED: U-box domain-containing protein 27-like [Cucumis sativus]
Length = 404
Score = 394 bits (1012), Expect = e-107
Identities = 214/407 (52%), Positives = 285/407 (70%), Gaps = 11/407 (2%)
Frame = +2
Query: 17 MVRNDLFITVPSFFKCPISLDVMKSPVSLCTGVTYDRSSIQAWLDNGNNTCPATMQVLNS 196
MV++DL IT+P+ F+CPISLDVMKSPVSLCTGVTYDRSSIQ WLDNGNNTCPATMQVL +
Sbjct: 1 MVKDDLCITIPTDFRCPISLDVMKSPVSLCTGVTYDRSSIQKWLDNGNNTCPATMQVLQT 60
Query: 197 KDFVPNHNLHRLIQIWSNSDSQ------SQNCLISRQEIRDLVNKIESCSDDEFKEIIEF 358
KDFVPNHNLHRLIQIWS+S Q S + L S Q +R L+N D ++ F
Sbjct: 61 KDFVPNHNLHRLIQIWSDSLHQRLHSPLSDSSLSSDQLLR-LIN--HQSRADSLPRLLSF 117
Query: 359 AKVSDENLKFLACLEGFVLVLVDVLSRNEELKKKEQVIRVLELVSIEYIDKDR----LFA 526
A S +N + L+ ++G + +LVD+L +Q +R+L L+ E DK+R +
Sbjct: 118 ASESLDNRRLLSGIDGLLPLLVDLLCNVHAGDLLDQAVRLLHLIRTEIGDKERFVKTILN 177
Query: 527 KNQNLLASILLVLRQGSFDSRISSLRVLEFIASINTESKLHIAETQGILTEVIHLIGSET 706
++N ++S+LL+LR+G+ + +I S +LE++A I+ E+K+ IAET G++ E++ LI S+
Sbjct: 178 TDRNSISSLLLILRKGTVELKICSANLLEYLA-IDAEAKILIAETDGLMQELLKLINSQN 236
Query: 707 DTIMIEAGLSCLIAISSHRRIKVKIVRFGLVQRLGKLLARXXXXXXXXXXXXXXXXXXXX 886
DT +IE+ LSCLI+IS +RIK+K+V+ G+++ + KLL+
Sbjct: 237 DTTLIESVLSCLISISMPKRIKIKLVQLGVIKSVTKLLSESNSSSSSSMTEKLLKVLETA 296
Query: 887 -TCTEGRTAICADTMTVTAIIEKMLKVSNVSTEHAVVILWSVCYLFRDQTAQENVMKGNG 1063
T EGRT I D++ V AI++K+LKVSN +TEHAV LWSVCYLFRD+ A E + K NG
Sbjct: 297 STVREGRTEIGEDSVCVAAIVQKVLKVSNAATEHAVTTLWSVCYLFRDEKAGEALTKANG 356
Query: 1064 LTKILLIMQSNCSPSVRQMCGDLMKIFKVNSKSCLSCYDTKTTHIMP 1204
LTKILL+MQSNCSP VRQM DL+KIF++NSKSCLS YDTKTTHIMP
Sbjct: 357 LTKILLLMQSNCSPPVRQMARDLLKIFRINSKSCLSSYDTKTTHIMP 403
>ref|XP_003531405.1| PREDICTED: U-box domain-containing protein 27-like [Glycine max]
Length = 418
Score = 389 bits (1000), Expect = e-106
Identities = 225/420 (53%), Positives = 283/420 (67%), Gaps = 23/420 (5%)
Frame = +2
Query: 17 MVRNDLFITVPSFFKCPISLDVMKSPVSLCTGVTYDRSSIQAWLDNGNNTCPATMQVLNS 196
MVR+DL ITVPSFF+CPISLDVMKSPVSLCTGVTYDRSSIQ WLDNGNNTCPATMQVL +
Sbjct: 1 MVRDDLCITVPSFFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLQT 60
Query: 197 KDFVPNHNLHRLIQIWSNS-----------DSQSQNCLISRQEIRDLVNKIESCSDDEFK 343
DFVPN L RLIQIWS+S S L+S+ I ++ + + SD+ F
Sbjct: 61 TDFVPNRTLQRLIQIWSDSVTHRVDSPDSPTSTESQSLLSKDHILVAISDLHTRSDNRFN 120
Query: 344 ---EIIEFAKVSDENLKFLACLEGFVLVLVDVLSR-NEELKKKEQVIRVLELVSIEYIDK 511
+I FA+ S+EN FL E FV VLV L N ++ +QV+ L+LV + D+
Sbjct: 121 SLSKIARFAQDSEENRDFLVRTECFVPVLVGFLDNVNGGVEFLQQVVTALDLVISKMEDR 180
Query: 512 D---RLFAKNQN-----LLASILLVLRQGSFDSRISSLRVLEFIASINTESKLHIAETQG 667
+ L K Q + S+LLVL+QGS S+I+S RVL+ +A ++ ESKL +AE +G
Sbjct: 181 EGMKNLILKRQGEGEKQSVDSLLLVLQQGSHASKIASARVLKSVA-VDAESKLLLAEKEG 239
Query: 668 ILTEVIHLIGSETDTIMIEAGLSCLIAISSHRRIKVKIVRFGLVQRLGKLLARXXXXXXX 847
+++E+++LI E D +IE LSCL++IS+ RR K+K+VR G V+ LL+
Sbjct: 240 LVSELLNLITPEKDPDLIENCLSCLVSISTPRRSKMKLVRLGAVKVFSNLLSAPGLSVSV 299
Query: 848 XXXXXXXXXXXXXTCTEGRTAICADTMTVTAIIEKMLKVSNVSTEHAVVILWSVCYLFRD 1027
T EGR+ IC D+ V+AI++K+LKVS+V+TEHAV LWSVCYLFRD
Sbjct: 300 KEKVLKLVETVSST-KEGRSEICEDSACVSAIVDKVLKVSSVATEHAVTTLWSVCYLFRD 358
Query: 1028 QTAQENVMKGNGLTKILLIMQSNCSPSVRQMCGDLMKIFKVNSKSCLSCYDTKTTHIMPF 1207
Q AQE V K NGLTKILL+MQSNCSP VRQM DL+KIF+VNSKSCLS YDTKTTHIMPF
Sbjct: 359 QKAQEAVTKANGLTKILLLMQSNCSPQVRQMSSDLLKIFRVNSKSCLSSYDTKTTHIMPF 418