BLASTX nr result

ID: Coptis25_contig00031238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031238
         (1324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280115.2| PREDICTED: uncharacterized protein LOC100254...   276   1e-71
ref|XP_002511179.1| conserved hypothetical protein [Ricinus comm...   260   6e-67
ref|XP_002322260.1| predicted protein [Populus trichocarpa] gi|2...   259   8e-67
ref|XP_003525535.1| PREDICTED: uncharacterized protein LOC100792...   238   3e-60
ref|XP_003522435.1| PREDICTED: uncharacterized protein LOC100787...   237   4e-60

>ref|XP_002280115.2| PREDICTED: uncharacterized protein LOC100254191 [Vitis vinifera]
          Length = 326

 Score =  276 bits (705), Expect = 1e-71
 Identities = 134/227 (59%), Positives = 172/227 (75%), Gaps = 2/227 (0%)
 Frame = +2

Query: 650  CSSKSP-CTNLPSDIPHSLMHQDTSSSVAD-LTKKELQLLRNIISKRSPCKLLVFGLPPE 823
            CSS SP C   P   P +   Q  +S+ A  LT+KE QLL N+IS R+PC LL+FGL P+
Sbjct: 91   CSSASPTCRKTPLRAPGARRSQHNNSANATALTEKEFQLLSNLISHRAPCNLLIFGLEPQ 150

Query: 824  YLFLSSLNTNGTTIFLDDNPENLKTIRTNNAATQIYKVKHHVAAKEAYNLLKQARVDPVC 1003
            +L L+S+N  GTTI L+D+P  L T+R  +  T+IYKV+HH+ A EAY +LK AR DP C
Sbjct: 151  HLVLASMNAGGTTILLEDDPAKLSTVRRRSNNTRIYKVEHHIPAGEAYRVLKHAREDPAC 210

Query: 1004 APQAGPLRFSSCKLALKQLPNSVYELKWDVILVDGQSTDKPEAPGRMSAIYTAAMIARTG 1183
            AP + PL  S+C+LAL +LP  VYELKWDV++VDG   D+ EAPGRM+AIYTA+MIAR G
Sbjct: 211  APHSKPLEESTCQLALTKLPQEVYELKWDVVVVDGPRGDRAEAPGRMAAIYTASMIARAG 270

Query: 1184 NLTDVLVHDVDKMIEKWFTREFLCEENLISSKGKLWHLRITGNSSST 1324
            N+T+V+VHDVD+MIEKWF+ EFLC+ENL+SSKGKLW+ R+ G S+ST
Sbjct: 271  NMTNVVVHDVDRMIEKWFSWEFLCDENLVSSKGKLWNFRLVGKSNST 317


>ref|XP_002511179.1| conserved hypothetical protein [Ricinus communis]
            gi|223550294|gb|EEF51781.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 328

 Score =  260 bits (664), Expect = 6e-67
 Identities = 128/224 (57%), Positives = 167/224 (74%), Gaps = 1/224 (0%)
 Frame = +2

Query: 653  SSKSPCTNLPSDIPHSL-MHQDTSSSVADLTKKELQLLRNIISKRSPCKLLVFGLPPEYL 829
            SS + C+ + S+I  S    Q++S+S   LTKKE +LL N+I  ++PC LL+FGL  ++L
Sbjct: 93   SSSTKCSAVSSNISSSPPTQQNSSTSATILTKKEFKLLSNVIKHKAPCNLLIFGLSAQFL 152

Query: 830  FLSSLNTNGTTIFLDDNPENLKTIRTNNAATQIYKVKHHVAAKEAYNLLKQARVDPVCAP 1009
             LSS+N+ GTTIFL+D+P+ + +IR  + +T IYK  +HV AK+AYNLLK AR    CAP
Sbjct: 153  KLSSINSGGTTIFLEDDPDRISSIRAKSNSTLIYKFDYHVPAKKAYNLLKHARESQDCAP 212

Query: 1010 QAGPLRFSSCKLALKQLPNSVYELKWDVILVDGQSTDKPEAPGRMSAIYTAAMIARTGNL 1189
             +G L+ S+CKLAL  LP  VY+ KWDV++VDG S   PEAPGRM+AIYTA MIAR G+ 
Sbjct: 213  SSGRLQNSTCKLALTNLPGEVYQQKWDVVVVDGPSGHSPEAPGRMAAIYTAGMIARAGHT 272

Query: 1190 TDVLVHDVDKMIEKWFTREFLCEENLISSKGKLWHLRITGNSSS 1321
            TDVLVHDVD+ IEKWF+ EFLC+ENL+SSKGKLW+ RIT   +S
Sbjct: 273  TDVLVHDVDRTIEKWFSWEFLCDENLVSSKGKLWNFRITSKPNS 316


>ref|XP_002322260.1| predicted protein [Populus trichocarpa] gi|222869256|gb|EEF06387.1|
            predicted protein [Populus trichocarpa]
          Length = 314

 Score =  259 bits (663), Expect = 8e-67
 Identities = 127/227 (55%), Positives = 163/227 (71%), Gaps = 2/227 (0%)
 Frame = +2

Query: 650  CSSKSP-CTNLPSDIP-HSLMHQDTSSSVADLTKKELQLLRNIISKRSPCKLLVFGLPPE 823
            CS+ SP C   PS  P +    Q  ++    LTKKE +LL ++I +++PC LLVFG  P+
Sbjct: 77   CSTPSPACEKAPSHTPSNQTAQQKIAADEPSLTKKEFKLLSDLIKRKAPCNLLVFGAEPQ 136

Query: 824  YLFLSSLNTNGTTIFLDDNPENLKTIRTNNAATQIYKVKHHVAAKEAYNLLKQARVDPVC 1003
            YL LSS+N+ GTTI L+D+P+ +   R  +  TQIYK+ +   AK+AY LL+ AR  P C
Sbjct: 137  YLRLSSINSGGTTILLEDDPDKISAARAKSNTTQIYKIDYQTPAKKAYKLLEHARKSPAC 196

Query: 1004 APQAGPLRFSSCKLALKQLPNSVYELKWDVILVDGQSTDKPEAPGRMSAIYTAAMIARTG 1183
            AP    L+ SSCKLALK LP  VYEL+W+V++VDG S   PEAPGRM AIYTA+MIAR G
Sbjct: 197  APNPEMLQNSSCKLALKNLPREVYELEWNVVVVDGPSGHSPEAPGRMGAIYTASMIARAG 256

Query: 1184 NLTDVLVHDVDKMIEKWFTREFLCEENLISSKGKLWHLRITGNSSST 1324
            N TDVLVHDVD+ IEKWF+ EFLC+ENL++SKGKLW  RI+G S+S+
Sbjct: 257  NTTDVLVHDVDRTIEKWFSWEFLCDENLVASKGKLWSFRISGKSNSS 303


>ref|XP_003525535.1| PREDICTED: uncharacterized protein LOC100792528 [Glycine max]
          Length = 292

 Score =  238 bits (607), Expect = 3e-60
 Identities = 116/223 (52%), Positives = 161/223 (72%), Gaps = 2/223 (0%)
 Frame = +2

Query: 662  SPCTNLPSDIPHSLMHQ-DTSSSVADLTKKELQLLRNIISKRSPCKLLVFGLPPEYLFLS 838
            S C    S  P S     +T +    LT+KE ++L ++I+ +SPC LL+FG  P+YL LS
Sbjct: 57   STCNKTASHAPESSDQPINTPNITTTLTEKEFKVLSDLIALKSPCNLLIFGFQPQYLILS 116

Query: 839  SLNTNGTTIFLDDNPENLKTIRTNNAATQIYKVKHHVAAKEAYNLLKQARVDPV-CAPQA 1015
            S+N  G+TIFLD++P+ +  +R  +  TQIYK+++++ AK  Y LLK AR++P  C P  
Sbjct: 117  SMNAAGSTIFLDEDPDKISKVRKISNNTQIYKLEYNMPAKAGYKLLKNARLNPATCVPNP 176

Query: 1016 GPLRFSSCKLALKQLPNSVYELKWDVILVDGQSTDKPEAPGRMSAIYTAAMIARTGNLTD 1195
              L+ S CKLALK LP+ VYE KWDV++VDG + D PE+PGRM +IYTA+++AR+GN +D
Sbjct: 177  RFLQKSKCKLALKNLPSQVYEKKWDVMVVDGPNGDSPESPGRMGSIYTASVLARSGNTSD 236

Query: 1196 VLVHDVDKMIEKWFTREFLCEENLISSKGKLWHLRITGNSSST 1324
            V+VHDVD+MIEKWF+ EFLC+ NL+ SKGKLWH RI  +S+ST
Sbjct: 237  VVVHDVDRMIEKWFSWEFLCDGNLLYSKGKLWHFRIKVHSNST 279


>ref|XP_003522435.1| PREDICTED: uncharacterized protein LOC100787566 [Glycine max]
          Length = 292

 Score =  237 bits (605), Expect = 4e-60
 Identities = 127/285 (44%), Positives = 180/285 (63%), Gaps = 2/285 (0%)
 Frame = +2

Query: 476  KNKNQREGQGKRRMNITTKKLLVTVFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCS 655
            +  +QR+ QG   MN+T KK LV +                                  S
Sbjct: 25   QRSSQRDHQG---MNLTNKKKLVPILLLILSIISILMLLSLILRS------------SSS 69

Query: 656  SKSPCTNLPSDIPHSLMHQDTSSSVADLTKKELQLLRNIISKRSPCKLLVFGLPPEYLFL 835
            + SP T   S  P S  H +++     LT+KE ++L N+++ +SPC LL+FG  P+YL L
Sbjct: 70   AMSPPT--ASHAPESSKHPNST-----LTEKEFKVLSNLVALKSPCNLLIFGFQPQYLTL 122

Query: 836  SSLNTNGTTIFLDDNPENLKTIRTNNAATQIYKVKHHVAAKEAYNLLKQARVDPVCAPQA 1015
            SS+N  G+TIFL D+ + +  + TN+  TQ Y++ ++V +K+A+NLLK AR +  CAP  
Sbjct: 123  SSMNAPGSTIFLYDHDDMIAKVATNSNNTQTYQLGYNVPSKKAFNLLKHARQNQACAPSY 182

Query: 1016 GP--LRFSSCKLALKQLPNSVYELKWDVILVDGQSTDKPEAPGRMSAIYTAAMIARTGNL 1189
                L+ S CK AL+ LP+ VYE KWD+I+VDG   D PE+PGRM +IYTA+++AR GN+
Sbjct: 183  PTQLLQKSKCKFALRNLPSEVYEKKWDIIVVDGPKGDSPESPGRMDSIYTASVLARAGNV 242

Query: 1190 TDVLVHDVDKMIEKWFTREFLCEENLISSKGKLWHLRITGNSSST 1324
            +DV+VHD+D+MIEKWF+ EFLC ENL+ SKGKLWH RI+G+S+ST
Sbjct: 243  SDVVVHDIDRMIEKWFSWEFLCHENLLCSKGKLWHFRISGHSNST 287


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