BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031235
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28363.3| unnamed protein product [Vitis vinifera]              181   7e-44
ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi...   181   7e-44
ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26
emb|CBI38763.3| unnamed protein product [Vitis vinifera]              122   2e-26
emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]   122   2e-26

>emb|CBI28363.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/110 (74%), Positives = 95/110 (86%)
 Frame = +3

Query: 9    EDISSKLVEMEIFMEEMGYVADRNHLLHNAEEEGYEGVGLHHTEMKALAFGLLSLPQGMP 188
            +++S+KL E+E  MEE+GYVAD+NHLLHNAEEE Y+GVGLHHTEMKALAFGL+SLP GMP
Sbjct: 821  KEVSAKLAEIEGKMEELGYVADKNHLLHNAEEEEYDGVGLHHTEMKALAFGLISLPHGMP 880

Query: 189  IRVFKGVRMCGDCHSAFKFLSAFLNRELVVKDFSNFHHFTSGKCSCKDKW 338
            +RV K VRMCGDCHSA KF+S FL RELVVKD  +FHHF  GKCSC+D W
Sbjct: 881  VRVVKNVRMCGDCHSACKFMSTFLERELVVKDPYSFHHFRDGKCSCRDTW 930


>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 906

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/110 (74%), Positives = 95/110 (86%)
 Frame = +3

Query: 9    EDISSKLVEMEIFMEEMGYVADRNHLLHNAEEEGYEGVGLHHTEMKALAFGLLSLPQGMP 188
            +++S+KL E+E  MEE+GYVAD+NHLLHNAEEE Y+GVGLHHTEMKALAFGL+SLP GMP
Sbjct: 797  KEVSAKLAEIEGKMEELGYVADKNHLLHNAEEEEYDGVGLHHTEMKALAFGLISLPHGMP 856

Query: 189  IRVFKGVRMCGDCHSAFKFLSAFLNRELVVKDFSNFHHFTSGKCSCKDKW 338
            +RV K VRMCGDCHSA KF+S FL RELVVKD  +FHHF  GKCSC+D W
Sbjct: 857  VRVVKNVRMCGDCHSACKFMSTFLERELVVKDPYSFHHFRDGKCSCRDTW 906


>ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Vitis vinifera]
          Length = 786

 Score =  122 bits (307), Expect = 2e-26
 Identities = 54/111 (48%), Positives = 78/111 (70%)
 Frame = +3

Query: 6    TEDISSKLVEMEIFMEEMGYVADRNHLLHNAEEEGYEGVGLHHTEMKALAFGLLSLPQGM 185
            T +I SK+ E+ I ++E GYV D N  LH+ +EEG E    +H+E  A+AFGLL++P G 
Sbjct: 676  TAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGA 735

Query: 186  PIRVFKGVRMCGDCHSAFKFLSAFLNRELVVKDFSNFHHFTSGKCSCKDKW 338
            PIR+FK +R+CGDCH+A K++S   +R ++++D + FHHF  G CSC D W
Sbjct: 736  PIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 786


>emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  122 bits (307), Expect = 2e-26
 Identities = 54/111 (48%), Positives = 78/111 (70%)
 Frame = +3

Query: 6   TEDISSKLVEMEIFMEEMGYVADRNHLLHNAEEEGYEGVGLHHTEMKALAFGLLSLPQGM 185
           T +I SK+ E+ I ++E GYV D N  LH+ +EEG E    +H+E  A+AFGLL++P G 
Sbjct: 609 TAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGA 668

Query: 186 PIRVFKGVRMCGDCHSAFKFLSAFLNRELVVKDFSNFHHFTSGKCSCKDKW 338
           PIR+FK +R+CGDCH+A K++S   +R ++++D + FHHF  G CSC D W
Sbjct: 669 PIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 719


>emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score =  122 bits (307), Expect = 2e-26
 Identities = 54/111 (48%), Positives = 78/111 (70%)
 Frame = +3

Query: 6   TEDISSKLVEMEIFMEEMGYVADRNHLLHNAEEEGYEGVGLHHTEMKALAFGLLSLPQGM 185
           T +I SK+ E+ I ++E GYV D N  LH+ +EEG E    +H+E  A+AFGLL++P G 
Sbjct: 330 TAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGA 389

Query: 186 PIRVFKGVRMCGDCHSAFKFLSAFLNRELVVKDFSNFHHFTSGKCSCKDKW 338
           PIR+FK +R+CGDCH+A K++S   +R ++++D + FHHF  G CSC D W
Sbjct: 390 PIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 440