BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031224
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325438.1| cationic amino acid transporter [Populus tri...    60   2e-07
emb|CBI31244.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_002271330.1| PREDICTED: high affinity cationic amino acid...    59   4e-07
ref|XP_002319189.1| cationic amino acid transporter [Populus tri...    59   5e-07
gb|AAN77151.1| fiber protein Fb12 [Gossypium barbadense]               58   7e-07

>ref|XP_002325438.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222862313|gb|EEE99819.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 641

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/48 (62%), Positives = 36/48 (75%), Gaps = 4/48 (8%)
 Frame = -1

Query: 169 GFSAGFLCPFVPLLPIVCILVNVYLMINLG*V----LSILLPCVVLIY 38
           G S GF+CPFVPLLPIVCILVN+YL+INLG      +S+ L   VL+Y
Sbjct: 561 GHSGGFICPFVPLLPIVCILVNIYLLINLGAATWTRVSVWLIVGVLVY 608


>emb|CBI31244.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 4/48 (8%)
 Frame = -1

Query: 169 GFSAGFLCPFVPLLPIVCILVNVYLMINLG*V----LSILLPCVVLIY 38
           G S GF+CPFVPLLPI CIL+NVYL++NLG      +SI L   VL+Y
Sbjct: 539 GHSGGFICPFVPLLPIACILINVYLLVNLGSATWTRVSIWLGIGVLVY 586


>ref|XP_002271330.1| PREDICTED: high affinity cationic amino acid transporter 1 [Vitis
           vinifera]
          Length = 639

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 4/48 (8%)
 Frame = -1

Query: 169 GFSAGFLCPFVPLLPIVCILVNVYLMINLG*V----LSILLPCVVLIY 38
           G S GF+CPFVPLLPI CIL+NVYL++NLG      +SI L   VL+Y
Sbjct: 559 GHSGGFICPFVPLLPIACILINVYLLVNLGSATWTRVSIWLGIGVLVY 606


>ref|XP_002319189.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222857565|gb|EEE95112.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 640

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 4/48 (8%)
 Frame = -1

Query: 169 GFSAGFLCPFVPLLPIVCILVNVYLMINLG*V----LSILLPCVVLIY 38
           G S GF+CPFVPLLPIVC LVN+YL+INLG      +S+ L   VL+Y
Sbjct: 560 GHSGGFICPFVPLLPIVCFLVNIYLLINLGAATWTRVSVWLIVGVLVY 607


>gb|AAN77151.1| fiber protein Fb12 [Gossypium barbadense]
          Length = 117

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = -1

Query: 169 GFSAGFLCPFVPLLPIVCILVNVYLMINLG 80
           G + GF+CPFVPLLPIVCIL+NVYL+INLG
Sbjct: 37  GHTGGFICPFVPLLPIVCILINVYLLINLG 66