BLASTX nr result

ID: Coptis25_contig00031220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031220
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB62040.1| CjMDR1 [Coptis japonica]                              198   3e-49
dbj|BAM11098.1| ABC protein [Coptis japonica]                         169   2e-40
ref|XP_003535294.1| PREDICTED: ABC transporter B family member 4...   169   2e-40
ref|XP_002515184.1| multidrug resistance protein 1, 2, putative ...   169   2e-40
ref|XP_002273987.1| PREDICTED: ABC transporter B family member 1...   169   2e-40

>dbj|BAB62040.1| CjMDR1 [Coptis japonica]
          Length = 1289

 Score =  198 bits (504), Expect = 3e-49
 Identities = 103/116 (88%), Positives = 103/116 (88%)
 Frame = -3

Query: 349  IRSMCFRTVVHMEIDWFDEPEHASGAIGAKLSADASTVRGLVGDALALLVQNAATAVSGL 170
            IRSMCFRTV HMEIDWFDEPEHASGAIGAKLSADASTVRGLVGDALALLVQNAATAV GL
Sbjct: 799  IRSMCFRTVAHMEIDWFDEPEHASGAIGAKLSADASTVRGLVGDALALLVQNAATAVCGL 858

Query: 169  VIAFVANWTXXXXXXXXXXXIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGS 2
            VIAFVANWT           IGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGS
Sbjct: 859  VIAFVANWTLALIILVLIPLIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGS 914


>dbj|BAM11098.1| ABC protein [Coptis japonica]
          Length = 1292

 Score =  169 bits (428), Expect = 2e-40
 Identities = 85/116 (73%), Positives = 97/116 (83%)
 Frame = -3

Query: 349  IRSMCFRTVVHMEIDWFDEPEHASGAIGAKLSADASTVRGLVGDALALLVQNAATAVSGL 170
            IRSMCF  VVHMEI+WFDEPEH+SGAIGAKLS+DA++VR LVGDAL+LLVQNAA+A++GL
Sbjct: 802  IRSMCFEKVVHMEINWFDEPEHSSGAIGAKLSSDAASVRSLVGDALSLLVQNAASAIAGL 861

Query: 169  VIAFVANWTXXXXXXXXXXXIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGS 2
             IAF ANW            IG+NGY+Q KFM GFSADAKMMYEEASQVA+DAVGS
Sbjct: 862  AIAFEANWILALIILVLLPLIGLNGYLQTKFMTGFSADAKMMYEEASQVASDAVGS 917


>ref|XP_003535294.1| PREDICTED: ABC transporter B family member 4-like [Glycine max]
          Length = 1282

 Score =  169 bits (428), Expect = 2e-40
 Identities = 86/116 (74%), Positives = 97/116 (83%)
 Frame = -3

Query: 349  IRSMCFRTVVHMEIDWFDEPEHASGAIGAKLSADASTVRGLVGDALALLVQNAATAVSGL 170
            IR MCF  VV+ME+ WFDEPE++SGAIGA+LSADA++VR LVGDAL LLVQN ATA++GL
Sbjct: 790  IRLMCFEKVVNMEVSWFDEPENSSGAIGARLSADAASVRALVGDALGLLVQNFATALAGL 849

Query: 169  VIAFVANWTXXXXXXXXXXXIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGS 2
            +IAFVA+W            IGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGS
Sbjct: 850  IIAFVASWQLALIILVLIPLIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGS 905


>ref|XP_002515184.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223545664|gb|EEF47168.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1301

 Score =  169 bits (428), Expect = 2e-40
 Identities = 86/116 (74%), Positives = 96/116 (82%)
 Frame = -3

Query: 349  IRSMCFRTVVHMEIDWFDEPEHASGAIGAKLSADASTVRGLVGDALALLVQNAATAVSGL 170
            IRS+CF  VVHMEI WFD+PEH+SGAIGA+LSADA+ VR LVGDALA LVQN ATAV+G+
Sbjct: 809  IRSICFEKVVHMEIGWFDDPEHSSGAIGARLSADAAAVRALVGDALAQLVQNIATAVAGV 868

Query: 169  VIAFVANWTXXXXXXXXXXXIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGS 2
            VIAF A+W            IGVNG+VQ+KFMKGFSADAKMMYEEASQVANDAVGS
Sbjct: 869  VIAFTASWQLALIILALIPLIGVNGFVQVKFMKGFSADAKMMYEEASQVANDAVGS 924


>ref|XP_002273987.1| PREDICTED: ABC transporter B family member 11 [Vitis vinifera]
          Length = 1297

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/116 (70%), Positives = 97/116 (83%)
 Frame = -3

Query: 349  IRSMCFRTVVHMEIDWFDEPEHASGAIGAKLSADASTVRGLVGDALALLVQNAATAVSGL 170
            +RSMCF  VVHME+ WFD+PEH+SGAIGA+LSADA+T+R LVGDALA +VQNAA+A++GL
Sbjct: 806  VRSMCFEKVVHMEVGWFDQPEHSSGAIGARLSADAATIRALVGDALAQVVQNAASAIAGL 865

Query: 169  VIAFVANWTXXXXXXXXXXXIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGS 2
             IAF A+W            IG+NGYVQ+KF+KGFSADAKMMYEEASQVANDAVGS
Sbjct: 866  AIAFAASWQLAFIILALIPLIGLNGYVQIKFLKGFSADAKMMYEEASQVANDAVGS 921


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