BLASTX nr result

ID: Coptis25_contig00031209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031209
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272890.1| PREDICTED: uncharacterized protein LOC100267...   214   2e-53
gb|AFK34560.1| unknown [Medicago truncatula]                          184   2e-44
ref|XP_002512224.1| conserved hypothetical protein [Ricinus comm...   184   2e-44
ref|NP_001238033.1| uncharacterized protein LOC100500690 precurs...   181   2e-43
ref|XP_002319067.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42

>ref|XP_002272890.1| PREDICTED: uncharacterized protein LOC100267439 [Vitis vinifera]
           gi|298204883|emb|CBI34190.3| unnamed protein product
           [Vitis vinifera]
          Length = 206

 Score =  214 bits (544), Expect = 2e-53
 Identities = 94/178 (52%), Positives = 129/178 (72%), Gaps = 3/178 (1%)
 Frame = -2

Query: 754 MAFSYLIVFVALLHILKPITAT---YNSSIDSYLANLCREVECGKGTCKASLDYTFNFIC 584
           MA + L+  +ALL +L P++A    ++ ++  +L NLC EVECGKGTCKASL+Y FNFIC
Sbjct: 1   MASTNLMASMALLLLLLPLSAMGDDWSPALSPFLDNLCDEVECGKGTCKASLEYKFNFIC 60

Query: 583 ECDSGWTQVSKGEEDDGHSFLPCIYPNCTMNYSCGEAPAPTPNVEEPPTNKSFYDPCYWT 404
           ECDSGW + ++G+ +DG  +LPC+ PNCT++YSC  AP+P P V   P N+S +DPCYW 
Sbjct: 61  ECDSGWKR-TRGDNEDGLKYLPCVIPNCTLDYSCMTAPSPAPAV---PHNESAFDPCYWM 116

Query: 403 YCGDGSCSPTSGHGYKCDCKQGYTNLMNSTAFPCFGECVIGSDCTGLGVTVPVSIPSS 230
           YCG+G C+ +S +GYKC+C  GY NL+N + +PC+ EC +GSDC  LG+ V  S  SS
Sbjct: 117 YCGEGKCTRSSAYGYKCECNSGYQNLLNISVYPCYSECALGSDCEKLGIKVSNSTSSS 174


>gb|AFK34560.1| unknown [Medicago truncatula]
          Length = 203

 Score =  184 bits (467), Expect = 2e-44
 Identities = 84/193 (43%), Positives = 115/193 (59%), Gaps = 2/193 (1%)
 Frame = -2

Query: 751 AFSYLIVFVALLHILKPITATYNSSIDSYLANLCREVECGKGTCKASLDYTFNFICECDS 572
           +F  L +   +L +L P+ A      D  L  +C EVECGKG C  +  Y  NF+CECDS
Sbjct: 3   SFKLLSLIAVVLMLLLPMAAK-GDFFDDVLEKVCEEVECGKGNCVVNSSYPLNFVCECDS 61

Query: 571 GWTQVSKGEEDDGH--SFLPCIYPNCTMNYSCGEAPAPTPNVEEPPTNKSFYDPCYWTYC 398
           GW + ++ E+DD +  SFLPC+ P C++NY C  AP P P  +  P N S +DPCYW YC
Sbjct: 62  GWKR-TQDEDDDIYATSFLPCVIPQCSLNYGCQPAPPPVPE-KTLPRNISAFDPCYWAYC 119

Query: 397 GDGSCSPTSGHGYKCDCKQGYTNLMNSTAFPCFGECVIGSDCTGLGVTVPVSIPSSVNNA 218
           G+G C+    H ++C+C   Y NL+N + FPC+ EC +GSDC+ LG+ VP S     ++A
Sbjct: 120 GEGQCTKNKTHTHRCECNPNYYNLLNISVFPCYSECTLGSDCSRLGIKVPNSTGDVDSHA 179

Query: 217 YSIIPRSFPWAMV 179
            SI    F W  V
Sbjct: 180 SSIFGGRFHWITV 192


>ref|XP_002512224.1| conserved hypothetical protein [Ricinus communis]
           gi|223548185|gb|EEF49676.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 204

 Score =  184 bits (467), Expect = 2e-44
 Identities = 82/193 (42%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
 Frame = -2

Query: 754 MAFSYLIVFVALLHILKPITATYNSSIDSYLANLCREVECGKGTCKASLDYTFNFICECD 575
           MA      F+AL  +L P  A  ++     L  +C EVECGKGTCK  +     ++CEC+
Sbjct: 1   MAIVKKFCFLALFLVLLPTIALGDNRSTPILDAICNEVECGKGTCKGDILKPLGYVCECE 60

Query: 574 SGWTQVSKGEEDDGHSFLPCIYPNCTMNYSCGEAPAPTPNVEEPPTNKSFYDPCYWTYCG 395
           SGW +    + +D   FLPC+YP CT+NY   +   PTP  +  P N SFYDPCYW +CG
Sbjct: 61  SGWARSPDADVNDTLQFLPCVYPKCTLNYDGCQPAPPTPPEKTVPLNSSFYDPCYWMFCG 120

Query: 394 DGSCSPTSGHGYKCDCKQGYTNLMNSTAFPCFGECVIGSDCTGLGVTVPVSIPS-SVNNA 218
           +G+C+  S + + C CK G++NL++   FPC+  C IGSDC  LG+ V  S  S   N A
Sbjct: 121 EGTCTKNSTYNHLCTCKSGFSNLLDVPYFPCYSPCTIGSDCASLGIKVSNSESSPGTNPA 180

Query: 217 YSIIPRSFPWAMV 179
            SI+P  F W ++
Sbjct: 181 SSILPGKFRWMII 193


>ref|NP_001238033.1| uncharacterized protein LOC100500690 precursor [Glycine max]
           gi|255630943|gb|ACU15834.1| unknown [Glycine max]
          Length = 204

 Score =  181 bits (458), Expect = 2e-43
 Identities = 79/194 (40%), Positives = 116/194 (59%), Gaps = 2/194 (1%)
 Frame = -2

Query: 754 MAFSYLIVFVALLHILKPITATYNSSIDSYLANLCREVECGKGTCKASLDYTFNFICECD 575
           M  S L+  +A+L I+    A    +I  +   +C EVECGKG+C  +  Y  NF+CECD
Sbjct: 1   MGSSKLLGIMAMLFIVLLPMAAKGDNITDFFDKVCEEVECGKGSCVVNTSYPLNFVCECD 60

Query: 574 SGWTQVSKGEEDDGHSFLPCIYPNCTMNYSCGEAPAPTPNVEEPPTNKSFYDPCYWTYCG 395
           SGW +    +++   SFLPC+ P C++NY C  AP P P  +  P N S +DPCYW YCG
Sbjct: 61  SGWKRTQDDDDEYATSFLPCVIPECSLNYGCQPAPPPVPE-KSFPHNFSAFDPCYWAYCG 119

Query: 394 DGSCSPTSGHGYKCDCKQGYTNLMNSTAFPCFGECVIGSDCTGLGVTVPVSI--PSSVNN 221
           +G+C+    H ++C+C+  Y NL+N + FPC+ EC +GSDC+ LG+ V  S     S ++
Sbjct: 120 EGTCTKNRTHTHRCECQPNYYNLLNISVFPCYSECTLGSDCSRLGIKVANSSTDSGSQDS 179

Query: 220 AYSIIPRSFPWAMV 179
           + SI    F W ++
Sbjct: 180 SASIFTGRFHWMVM 193


>ref|XP_002319067.1| predicted protein [Populus trichocarpa] gi|222857443|gb|EEE94990.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  177 bits (450), Expect = 2e-42
 Identities = 80/210 (38%), Positives = 120/210 (57%), Gaps = 10/210 (4%)
 Frame = -2

Query: 754 MAFSYLIVFVALLHILKPITAT--YNSSIDSYLANLCREVECGKGTCKASLDYTFNFICE 581
           MAFS  + FV +L ++ P+ A    + ++ ++   LC+EV+CGKGTC     Y  ++ CE
Sbjct: 1   MAFSKALPFVTMLLVVLPMVAMADIDGNLTAFYDRLCKEVDCGKGTCVGDKSYPLSYKCE 60

Query: 580 CDSGW--TQVSKGEEDDGHSFLPCIYPNCTMNY-SCGEAPAPTPNVEEPPTNKSFYDPCY 410
           C +GW  TQ    + DD H FLPC+ PNCT+ Y +C  AP P P  +E P N SF+DPCY
Sbjct: 61  CQAGWKQTQYDDDDVDDEHKFLPCVIPNCTLKYGTCQPAPPPVPQ-KEAPHNSSFFDPCY 119

Query: 409 WTYCGDGSCSPTSGHGYKCDCKQGYTNLMNSTAFPCFGECVIGSDCTGL-----GVTVPV 245
           W YCG+G C+    + + C C  G+ NL+N + +PC+G C +GSDC  +       +   
Sbjct: 120 WMYCGEGQCTNNGTYRHTCTCNPGFVNLLNISYYPCYGACTLGSDCADIIRIANSTSTGS 179

Query: 244 SIPSSVNNAYSIIPRSFPWAMVFTFLLAIA 155
              +  N A +I+P  F W ++    + +A
Sbjct: 180 GTGTGGNPASTILPAKFQWMIILLVSMLMA 209


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