BLASTX nr result

ID: Coptis25_contig00031208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031208
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273224.1| PREDICTED: uncharacterized protein LOC100249...   102   3e-20
ref|XP_002331348.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002315556.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
gb|AFK39734.1| unknown [Lotus japonicus]                               94   1e-17
gb|AFK37614.1| unknown [Lotus japonicus]                               94   1e-17

>ref|XP_002273224.1| PREDICTED: uncharacterized protein LOC100249327 [Vitis vinifera]
           gi|297736870|emb|CBI26071.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  102 bits (254), Expect = 3e-20
 Identities = 56/78 (71%), Positives = 67/78 (85%)
 Frame = +2

Query: 35  MSDSNSPPPSSVFIPLSPSPKKNNTISPITAKINELSESRSELLTRIQGLKQDLQSWRSK 214
           M++S+S PP  V  PLS S K+N  ++PI +KI EL+ESR+ELL+RIQGLKQDLQSWRSK
Sbjct: 1   MANSDSTPPLPVVAPLS-SRKEN--VTPIGSKIAELNESRTELLSRIQGLKQDLQSWRSK 57

Query: 215 LDTQVKVYRDELSDLKKS 268
           LDTQVKVYRDELS+LKKS
Sbjct: 58  LDTQVKVYRDELSELKKS 75


>ref|XP_002331348.1| predicted protein [Populus trichocarpa] gi|222873381|gb|EEF10512.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/78 (66%), Positives = 66/78 (84%)
 Frame = +2

Query: 35  MSDSNSPPPSSVFIPLSPSPKKNNTISPITAKINELSESRSELLTRIQGLKQDLQSWRSK 214
           M++S+S   S+  +P++P  KK NT+ PI +KI EL+ESRS+LL RIQGLKQDLQSWRSK
Sbjct: 1   MANSDS---STATLPIAP--KKENTV-PIGSKIAELNESRSDLLNRIQGLKQDLQSWRSK 54

Query: 215 LDTQVKVYRDELSDLKKS 268
           LDTQVK++RDELS+LKKS
Sbjct: 55  LDTQVKIHRDELSELKKS 72


>ref|XP_002315556.1| predicted protein [Populus trichocarpa] gi|222864596|gb|EEF01727.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/75 (62%), Positives = 58/75 (77%)
 Frame = +2

Query: 44  SNSPPPSSVFIPLSPSPKKNNTISPITAKINELSESRSELLTRIQGLKQDLQSWRSKLDT 223
           +NS   ++      P  +K   ++PI +KI EL+ESR+ELL RIQGLKQDLQSWRSKLDT
Sbjct: 2   ANSDSSTATLSAPLPLARKKENVTPIGSKIAELNESRTELLNRIQGLKQDLQSWRSKLDT 61

Query: 224 QVKVYRDELSDLKKS 268
           QVK+YRDELS+LKKS
Sbjct: 62  QVKIYRDELSELKKS 76


>gb|AFK39734.1| unknown [Lotus japonicus]
          Length = 145

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 54/78 (69%), Positives = 64/78 (82%)
 Frame = +2

Query: 35  MSDSNSPPPSSVFIPLSPSPKKNNTISPITAKINELSESRSELLTRIQGLKQDLQSWRSK 214
           M+D +S  PS   +PLS   K+N  I+PI++KI EL+ESRSELL RIQGLKQDLQ WRSK
Sbjct: 1   MADPDSSAPS---LPLST--KEN--ITPISSKIAELNESRSELLGRIQGLKQDLQGWRSK 53

Query: 215 LDTQVKVYRDELSDLKKS 268
           LDTQVKVYRDELS+LKK+
Sbjct: 54  LDTQVKVYRDELSELKKT 71


>gb|AFK37614.1| unknown [Lotus japonicus]
          Length = 145

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 54/78 (69%), Positives = 64/78 (82%)
 Frame = +2

Query: 35  MSDSNSPPPSSVFIPLSPSPKKNNTISPITAKINELSESRSELLTRIQGLKQDLQSWRSK 214
           M+D +S  PS   +PLS   K+N  I+PI++KI EL+ESRSELL RIQGLKQDLQ WRSK
Sbjct: 1   MADPDSSAPS---LPLST--KEN--ITPISSKIAELNESRSELLGRIQGLKQDLQGWRSK 53

Query: 215 LDTQVKVYRDELSDLKKS 268
           LDTQVKVYRDELS+LKK+
Sbjct: 54  LDTQVKVYRDELSELKKT 71


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