BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031205
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22
emb|CBI27289.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_002512079.1| pentatricopeptide repeat-containing protein,...   105   5e-21

>ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|222851159|gb|EEE88706.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score =  118 bits (295), Expect = 6e-25
 Identities = 51/71 (71%), Positives = 63/71 (88%)
 Frame = -1

Query: 213 KNSNFVAFLRVFNENCKIALGEKLDFMKPDLNACNAALEGCCCELESISDAESVLETMSV 34
           KN   +AFL+VF E+C+IA+ EKLDFMKPD++ACN ALEGCCCELES+S+AE V+ETMSV
Sbjct: 183 KNDKVIAFLKVFEESCRIAIDEKLDFMKPDMDACNVALEGCCCELESVSEAEKVIETMSV 242

Query: 33  LGVRPDEASFG 1
           LG++PDE SFG
Sbjct: 243 LGIKPDELSFG 253


>ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g69290-like [Cucumis sativus]
           gi|449517162|ref|XP_004165615.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g69290-like [Cucumis sativus]
          Length = 656

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/71 (69%), Positives = 61/71 (85%)
 Frame = -1

Query: 213 KNSNFVAFLRVFNENCKIALGEKLDFMKPDLNACNAALEGCCCELESISDAESVLETMSV 34
           ++ + + FLRVF ENC+IAL E+LDF+KPDL ACNAALEGCC ELES++DAE V+ETMS+
Sbjct: 185 QSGSLIPFLRVFEENCRIALDERLDFLKPDLIACNAALEGCCHELESVTDAEKVIETMSL 244

Query: 33  LGVRPDEASFG 1
           L +RPDE SFG
Sbjct: 245 LYLRPDEVSFG 255


>emb|CBI27289.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/71 (69%), Positives = 62/71 (87%)
 Frame = -1

Query: 213 KNSNFVAFLRVFNENCKIALGEKLDFMKPDLNACNAALEGCCCELESISDAESVLETMSV 34
           +N +FVAFLRVFNE C+IA+ EKL+ MKPDL+ACN ALEGC  +LES+S+AE V+E MSV
Sbjct: 183 RNRSFVAFLRVFNETCRIAIDEKLESMKPDLDACNVALEGCSQDLESVSEAEKVVEMMSV 242

Query: 33  LGVRPDEASFG 1
           LG++PDE+SFG
Sbjct: 243 LGIQPDESSFG 253


>ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290
           [Vitis vinifera]
          Length = 655

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/71 (69%), Positives = 62/71 (87%)
 Frame = -1

Query: 213 KNSNFVAFLRVFNENCKIALGEKLDFMKPDLNACNAALEGCCCELESISDAESVLETMSV 34
           +N +FVAFLRVFNE C+IA+ EKL+ MKPDL+ACN ALEGC  +LES+S+AE V+E MSV
Sbjct: 183 RNRSFVAFLRVFNETCRIAIDEKLESMKPDLDACNVALEGCSQDLESVSEAEKVVEMMSV 242

Query: 33  LGVRPDEASFG 1
           LG++PDE+SFG
Sbjct: 243 LGIQPDESSFG 253


>ref|XP_002512079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549259|gb|EEF50748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 650

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/71 (69%), Positives = 60/71 (84%)
 Frame = -1

Query: 213 KNSNFVAFLRVFNENCKIALGEKLDFMKPDLNACNAALEGCCCELESISDAESVLETMSV 34
           KN  FVAFL+VF E+ +IA+ EKLDFMKPDL ACN ALE CC E+ES+SDA++V+E MSV
Sbjct: 178 KNGMFVAFLKVFEESYRIAVDEKLDFMKPDLGACNLALECCCEEIESVSDADNVIEIMSV 237

Query: 33  LGVRPDEASFG 1
           LG++PDE SFG
Sbjct: 238 LGIKPDEMSFG 248