BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031197
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi...    87   2e-15
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi...    87   2e-15
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    86   3e-15
ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm...    86   4e-15
ref|XP_002313690.1| f-box family protein [Populus trichocarpa] g...    84   1e-14

>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 458

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 62/179 (34%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
 Frame = +2

Query: 35  DIVHYMGKFVVVCNSGRGFLIDPCTLSVTLLVDRAGYGGTKRLVESNGHLFLVEIFSNVS 214
           D++ + G+F  V NSG  FL++     VTL+ +    G  K L+E NG L LV+++  V 
Sbjct: 203 DVILFNGEFYAVDNSGATFLVES-QHKVTLIAEPVFGGDKKILMECNGELLLVDMYLTVD 261

Query: 215 PWRHGTGGQFLP---------IVCEVFRLFE-GKEQWVQVDSLADSVFLVCPECSFSVSA 364
               G G    P         +  +VF+L   G ++W  V  L +++  +   CSFS SA
Sbjct: 262 S-EEGFGLDGEPTEGVLHEKTVGFKVFKLHRNGSKKWTVVCDLGNTMLFLGENCSFSASA 320

Query: 365 FDFPGCKGNCILLKD-YNFVTLDKDDAF-DRNIGVFNLIDGTFEAADSS--YLQLFWPP 529
               GCKGNCI   D +    +D+DD F   +I +F+L  GT      S  Y +LFWPP
Sbjct: 321 SGVSGCKGNCIFFTDGFLCPNVDEDDVFKGSDIAIFDLEFGTISPLSDSPMYSRLFWPP 379


>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 404

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 62/179 (34%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
 Frame = +2

Query: 35  DIVHYMGKFVVVCNSGRGFLIDPCTLSVTLLVDRAGYGGTKRLVESNGHLFLVEIFSNVS 214
           D++ + G+F  V NSG  FL++     VTL+ +    G  K L+E NG L LV+++  V 
Sbjct: 203 DVILFNGEFYAVDNSGATFLVES-QHKVTLIAEPVFGGDKKILMECNGELLLVDMYLTVD 261

Query: 215 PWRHGTGGQFLP---------IVCEVFRLFE-GKEQWVQVDSLADSVFLVCPECSFSVSA 364
               G G    P         +  +VF+L   G ++W  V  L +++  +   CSFS SA
Sbjct: 262 S-EEGFGLDGEPTEGVLHEKTVGFKVFKLHRNGSKKWTVVCDLGNTMLFLGENCSFSASA 320

Query: 365 FDFPGCKGNCILLKD-YNFVTLDKDDAF-DRNIGVFNLIDGTFEAADSS--YLQLFWPP 529
               GCKGNCI   D +    +D+DD F   +I +F+L  GT      S  Y +LFWPP
Sbjct: 321 SGVSGCKGNCIFFTDGFLCPNVDEDDVFKGSDIAIFDLEFGTISPLSDSPMYSRLFWPP 379


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 60/174 (34%), Positives = 93/174 (53%), Gaps = 9/174 (5%)
 Frame = +2

Query: 35  DIVHYMGKFVVVCNSGRGFLIDPCTLS--VTLLVDRAGYGGTKR-LVESNGHLFLVEIFS 205
           D++ + GKF  V N+GR  ++D    S  V  L   + +GG K+ LVES G L LV+ + 
Sbjct: 203 DVIFFDGKFYAVDNTGRTVVVDVADGSSPVVNLAASSVFGGDKKVLVESEGELLLVDTYF 262

Query: 206 NV--SPWRHGTGGQFLPIVCEVFRLFEGKEQWVQVDSLADSVFLVCPECSFSVSAFDFPG 379
            +      H        I  +VFRL + +++WV+++SL D +  +  + SFS  A DF G
Sbjct: 263 TMYHDDDEHVRWMIERMIHFKVFRLDQREQKWVEIESLGDRLLFLGDDSSFSARASDFYG 322

Query: 380 CKGNCILLKDYNFVTLDKDDAFDRN--IGVFNLIDGTFEAADS--SYLQLFWPP 529
           CKGN I   + +F +  ++D   R+  IGVF+L  G+     S  +Y +  WPP
Sbjct: 323 CKGNSICFTNISFFSDAEEDDASRSGTIGVFDLDSGSIGPLSSYANYSKTIWPP 376


>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
           gi|223532164|gb|EEF33970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 25/190 (13%)
 Frame = +2

Query: 35  DIVHYMGKFVVVCNSGRGFLIDPCTLSVTL-LVDRAGYGGTKR-LVESNGHLFLVEIFSN 208
           D++ Y G F  V N+GR  ++    L+  L L+    +GG K+ LVES G L LV+++ +
Sbjct: 145 DVIVYKGNFYAVDNTGRTVIV---RLNTELGLIANPVFGGDKKYLVESLGDLLLVDMYLS 201

Query: 209 VSPWRHGT--GGQFLPIVCE----------VFRLFEGKEQWVQVDSLADSVFLVCPECSF 352
           +     G   G +FL  + +          VF+L +  + W++V SL D V  +  + +F
Sbjct: 202 IDTAEGGLSFGEEFLEHLAQYMSERTVRFKVFKLDKEAQTWIEVKSLGDRVLFLGDDSTF 261

Query: 353 SVSAFDFPGCKGNCILLKDYNFVTLDK-------DDAF--DRNIGVFNLIDGTFEAADS- 502
           S S  D  GCKGNCI   D  F + D+       DD     R+IGVF+L  G      + 
Sbjct: 262 SASVSDLSGCKGNCIFFVDNFFYSRDENLRANGGDDGVLAGRDIGVFDLETGCIGPLGNY 321

Query: 503 -SYLQLFWPP 529
             Y ++FWPP
Sbjct: 322 PEYAKMFWPP 331


>ref|XP_002313690.1| f-box family protein [Populus trichocarpa]
           gi|222850098|gb|EEE87645.1| f-box family protein
           [Populus trichocarpa]
          Length = 410

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 16/181 (8%)
 Frame = +2

Query: 35  DIVHYMGKFVVVCNSGRGFLIDPCTLSVTLLVDRAGYGGTKRLVESNGHLFLVEIFSNVS 214
           D++ Y G+F  V N+GR  ++   T  + L+ D    G  K LVES G L LV+++ ++ 
Sbjct: 207 DVIVYKGRFYAVDNTGRTVVVALDT-DLGLVGDPVFGGDKKYLVESKGDLLLVDMYLSID 265

Query: 215 PWRHGTGG--------QFLP---IVCEVFRLFEGKEQWVQVDSLADSVFLVCPECSFSVS 361
                + G        Q++    +  +VF+L E  + W++V +L D V  +  + +FS S
Sbjct: 266 TDEGLSIGNDVVQDLVQYMSERTVRFKVFKLNEEGKSWIEVKNLEDRVLFLGDDSTFSAS 325

Query: 362 AFDFPGCKGNCILLKDYNFVTLDKDD---AFDRNIGVFNLIDGTFEAADS--SYLQLFWP 526
           A +  GCKGNCI  +D  F + ++ D      R+IGVF L  G      +   Y ++FWP
Sbjct: 326 ASELSGCKGNCIFFEDNFFYSREEGDDGSMIGRDIGVFELESGCIGPLRNFPDYSKMFWP 385

Query: 527 P 529
           P
Sbjct: 386 P 386