BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031192
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containi...   202   3e-50
emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]   202   3e-50
ref|XP_003634853.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   200   2e-49
ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containi...   194   9e-48
ref|XP_003546143.1| PREDICTED: pentatricopeptide repeat-containi...   182   5e-44

>ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Vitis vinifera]
          Length = 396

 Score =  202 bits (514), Expect = 3e-50
 Identities = 100/178 (56%), Positives = 135/178 (75%), Gaps = 2/178 (1%)
 Frame = -3

Query: 529 RLKPISTHRN--FSSILNPDSXXXXXXXXXXXXXXXXXXTEKNPEKILDICRAASLTPEN 356
           RL+PIS+HR   FSSIL+PDS                  +E++P++IL+ICRAA+LTPE+
Sbjct: 6   RLRPISSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPES 65

Query: 355 HLDRVAFSLAISNLKETQSFELIRTFLEELKTRPDLKNDRFYSHSIVLYGQAGMIDHAKR 176
           HLDRVAFS+AIS L +++ F+ IR FL+ELK RPDL+ +RF SH+IVL+GQAGM++ A R
Sbjct: 66  HLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVR 125

Query: 175 TFKTMGEAGISRTVKSLNALLFACLIGKKYDEVKSIFVEFPKRYGIQCNLDTFNTVIK 2
           TF+ M + G+ RTV+SLNALLF+C++ K Y E   IF+EFPK YGI+ NLD++NTV+K
Sbjct: 126 TFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLK 183


>emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]
          Length = 396

 Score =  202 bits (514), Expect = 3e-50
 Identities = 100/178 (56%), Positives = 135/178 (75%), Gaps = 2/178 (1%)
 Frame = -3

Query: 529 RLKPISTHRN--FSSILNPDSXXXXXXXXXXXXXXXXXXTEKNPEKILDICRAASLTPEN 356
           RL+PIS+HR   FSSIL+PDS                  +E++P++IL+ICRAA+LTPE+
Sbjct: 6   RLRPISSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPES 65

Query: 355 HLDRVAFSLAISNLKETQSFELIRTFLEELKTRPDLKNDRFYSHSIVLYGQAGMIDHAKR 176
           HLDRVAFS+AIS L +++ F+ IR FL+ELK RPDL+ +RF SH+IVL+GQAGM++ A R
Sbjct: 66  HLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVR 125

Query: 175 TFKTMGEAGISRTVKSLNALLFACLIGKKYDEVKSIFVEFPKRYGIQCNLDTFNTVIK 2
           TF+ M + G+ RTV+SLNALLF+C++ K Y E   IF+EFPK YGI+ NLD++NTV+K
Sbjct: 126 TFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLK 183


>ref|XP_003634853.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g61870, mitochondrial-like [Vitis vinifera]
          Length = 336

 Score =  200 bits (508), Expect = 2e-49
 Identities = 99/178 (55%), Positives = 134/178 (75%), Gaps = 2/178 (1%)
 Frame = -3

Query: 529 RLKPISTHRN--FSSILNPDSXXXXXXXXXXXXXXXXXXTEKNPEKILDICRAASLTPEN 356
           RL+PI +HR   FSSIL+PDS                  +E++P++IL+ICRAA+LTPE+
Sbjct: 6   RLRPIYSHRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPES 65

Query: 355 HLDRVAFSLAISNLKETQSFELIRTFLEELKTRPDLKNDRFYSHSIVLYGQAGMIDHAKR 176
           HLDRVAFS+AIS L +++ F+ IR FL+ELK RPDL+ +RF SH+IVL+GQAGM++ A R
Sbjct: 66  HLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVR 125

Query: 175 TFKTMGEAGISRTVKSLNALLFACLIGKKYDEVKSIFVEFPKRYGIQCNLDTFNTVIK 2
           TF+ M + G+ RTV+SLNALLF+C++ K Y E   IF+EFPK YGI+ NLD++NTV+K
Sbjct: 126 TFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLK 183


>ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449471723|ref|XP_004153390.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449530564|ref|XP_004172264.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
          Length = 405

 Score =  194 bits (493), Expect = 9e-48
 Identities = 97/169 (57%), Positives = 126/169 (74%)
 Frame = -3

Query: 508 HRNFSSILNPDSXXXXXXXXXXXXXXXXXXTEKNPEKILDICRAASLTPENHLDRVAFSL 329
           +R+ S+IL+PDS                  TE+NPE+I+DICRAASLTPE HLDR+AFS+
Sbjct: 24  YRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDICRAASLTPEFHLDRIAFSV 83

Query: 328 AISNLKETQSFELIRTFLEELKTRPDLKNDRFYSHSIVLYGQAGMIDHAKRTFKTMGEAG 149
           AIS L + + F+ IR FLEELK+RPDLKN+RF  H+IVLYGQA M+DHA RTFK + E G
Sbjct: 84  AISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAIRTFKQIDELG 143

Query: 148 ISRTVKSLNALLFACLIGKKYDEVKSIFVEFPKRYGIQCNLDTFNTVIK 2
           +  +VK+LNALLFAC + K Y E+K +++EFPK YGI+ ++DT+N VIK
Sbjct: 144 VRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGIEPDIDTYNRVIK 192


>ref|XP_003546143.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Glycine max]
          Length = 388

 Score =  182 bits (461), Expect = 5e-44
 Identities = 98/183 (53%), Positives = 126/183 (68%)
 Frame = -3

Query: 550 MFLFSRLRLKPISTHRNFSSILNPDSXXXXXXXXXXXXXXXXXXTEKNPEKILDICRAAS 371
           M +FSRLR      H + +SIL+P+S                  +E NPE+ILDICRAA+
Sbjct: 1   MSIFSRLR------HYSTTSILSPNSSTPLTSKQKTRSAIHLLKSETNPERILDICRAAA 54

Query: 370 LTPENHLDRVAFSLAISNLKETQSFELIRTFLEELKTRPDLKNDRFYSHSIVLYGQAGMI 191
           LTP++H+DR AFSLA+S L     F  IRTFL++LKTRPDL+N++F SH+IVLYGQA M+
Sbjct: 55  LTPDSHIDRRAFSLAVSKLAAAHHFAGIRTFLDDLKTRPDLRNEKFLSHAIVLYGQANML 114

Query: 190 DHAKRTFKTMGEAGISRTVKSLNALLFACLIGKKYDEVKSIFVEFPKRYGIQCNLDTFNT 11
           DHA RTF    +    R+VK+LN+LLFA L+ K Y E+  I++EFPK Y IQ NLDT+NT
Sbjct: 115 DHAIRTFTE--DLPSPRSVKTLNSLLFAALLAKNYKELTRIYLEFPKTYSIQPNLDTYNT 172

Query: 10  VIK 2
           VIK
Sbjct: 173 VIK 175