BLASTX nr result
ID: Coptis25_contig00031170
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00031170 (974 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002318577.1| predicted protein [Populus trichocarpa] gi|2... 241 3e-61 ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 238 1e-60 ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP... 226 8e-57 ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ... 225 1e-56 emb|CBI15349.3| unnamed protein product [Vitis vinifera] 219 8e-55 >ref|XP_002318577.1| predicted protein [Populus trichocarpa] gi|222859250|gb|EEE96797.1| predicted protein [Populus trichocarpa] Length = 460 Score = 241 bits (614), Expect = 3e-61 Identities = 115/180 (63%), Positives = 137/180 (76%) Frame = +2 Query: 95 TAAQTNFCKVTTTWFGFFKIQRGSNEILDSVPLSLPNYSYESQAVWIRVPPSIKDAVENR 274 TAAQ CKVTTTWFGF+ IQRGSN++LD+ LSLP YSYESQAVWI VP SIK VE + Sbjct: 270 TAAQALSCKVTTTWFGFYCIQRGSNKVLDTFDLSLPKYSYESQAVWIPVPQSIKKLVEEK 329 Query: 275 KLSFPAGLHAVAHALCNVVPLFIQCNSSDLASECVNPNEIHYLSEGEIKYRRQKVPERIL 454 + SF GLHA +HAL NVVPL+++CNSSDLA EC NP++ Y PERIL Sbjct: 330 QFSFRGGLHAASHALLNVVPLYLRCNSSDLAPECPNPHDSRYF------------PERIL 377 Query: 455 LYDQHPGGSGVSAQLQPRFREILVASLELITTCRCSVETGCPSCVQSFSCHEYNEVLHKN 634 +YDQHPGG+GVS Q+QP F E+L A+LEL+T C CS +TGCP+CVQS CHEYNEV+HK+ Sbjct: 378 VYDQHPGGTGVSMQIQPYFTELLNAALELLTCCHCSGDTGCPNCVQSMVCHEYNEVIHKD 437 >ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase HRQ1-like [Cucumis sativus] Length = 1218 Score = 238 bits (608), Expect = 1e-60 Identities = 113/180 (62%), Positives = 136/180 (75%) Frame = +2 Query: 95 TAAQTNFCKVTTTWFGFFKIQRGSNEILDSVPLSLPNYSYESQAVWIRVPPSIKDAVENR 274 T AQ N C+VTTTWFGF++IQ+GSN+ILDSV LSLP YSY SQAVWI VP S+K+ V+ + Sbjct: 1033 TTAQANDCRVTTTWFGFYRIQKGSNQILDSVDLSLPKYSYNSQAVWIPVPQSVKEEVKRK 1092 Query: 275 KLSFPAGLHAVAHALCNVVPLFIQCNSSDLASECVNPNEIHYLSEGEIKYRRQKVPERIL 454 +F AGLH +HAL NVVPL I CN SDLA EC NP++ Y PERIL Sbjct: 1093 NFNFRAGLHGASHALLNVVPLRIICNMSDLAPECANPHDTRYF------------PERIL 1140 Query: 455 LYDQHPGGSGVSAQLQPRFREILVASLELITTCRCSVETGCPSCVQSFSCHEYNEVLHKN 634 LYDQHPGG+G+S Q+QP F E+L A+ EL+T+CRC ETGCP+CVQS +CHEYNEVLHK+ Sbjct: 1141 LYDQHPGGTGMSLQIQPVFIELLNAAFELLTSCRCYGETGCPNCVQSLACHEYNEVLHKD 1200 >ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase HRQ1-like [Vitis vinifera] Length = 1231 Score = 226 bits (575), Expect = 8e-57 Identities = 108/201 (53%), Positives = 141/201 (70%) Frame = +2 Query: 95 TAAQTNFCKVTTTWFGFFKIQRGSNEILDSVPLSLPNYSYESQAVWIRVPPSIKDAVENR 274 T AQ + C+VTTTWFGF +I +GSN++ D+V LSLP YSY+SQAVW+RVP S+K AVE Sbjct: 1038 TTAQVHDCRVTTTWFGFRRIWKGSNKVFDTVELSLPTYSYQSQAVWVRVPQSVKTAVEIH 1097 Query: 275 KLSFPAGLHAVAHALCNVVPLFIQCNSSDLASECVNPNEIHYLSEGEIKYRRQKVPERIL 454 + SF AGLHA +HA+ NVVPL++ CNSSDLA EC NP++ Y +PERIL Sbjct: 1098 RFSFRAGLHAASHAVLNVVPLYVICNSSDLAPECSNPHDTRY------------IPERIL 1145 Query: 455 LYDQHPGGSGVSAQLQPRFREILVASLELITTCRCSVETGCPSCVQSFSCHEYNEVLHKN 634 LYD HPGG+G SAQ++ F E+L A+LEL+ +C C+ +TGCP+C+Q+ +C EYNE+LHK+ Sbjct: 1146 LYDPHPGGTGFSAQVRSHFTELLTAALELLMSCCCTGDTGCPNCIQNLACGEYNELLHKD 1205 Query: 635 XXXXXXXXXXXXXXSYSGRGH 697 SY G GH Sbjct: 1206 AAIMIIKGVLEAEESYFG-GH 1225 >ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 1189 Score = 225 bits (574), Expect = 1e-56 Identities = 107/180 (59%), Positives = 132/180 (73%) Frame = +2 Query: 95 TAAQTNFCKVTTTWFGFFKIQRGSNEILDSVPLSLPNYSYESQAVWIRVPPSIKDAVENR 274 T AQ N+CKVTT WFGF++I+RG+ ILD LSLP YSYESQAVWI+VP S+K +V+ + Sbjct: 991 TTAQANYCKVTTIWFGFYRIERGTKRILDKCDLSLPKYSYESQAVWIQVPQSVKISVQ-K 1049 Query: 275 KLSFPAGLHAVAHALCNVVPLFIQCNSSDLASECVNPNEIHYLSEGEIKYRRQKVPERIL 454 F GLHA +HA+ VVPL++ CN SDLA EC NP++ + PERIL Sbjct: 1050 YFPFRKGLHAASHAILKVVPLYVFCNYSDLAPECPNPHDTRFF------------PERIL 1097 Query: 455 LYDQHPGGSGVSAQLQPRFREILVASLELITTCRCSVETGCPSCVQSFSCHEYNEVLHKN 634 +YDQHPGG+GVS Q+QP F E+L A+LEL+T+C CS TGCP CVQS +CHEYNEVLHKN Sbjct: 1098 VYDQHPGGTGVSVQIQPYFTELLNAALELLTSCHCSGITGCPHCVQSMACHEYNEVLHKN 1157 >emb|CBI15349.3| unnamed protein product [Vitis vinifera] Length = 1188 Score = 219 bits (558), Expect = 8e-55 Identities = 108/207 (52%), Positives = 141/207 (68%), Gaps = 6/207 (2%) Frame = +2 Query: 95 TAAQTNFCKVTTTWFGFFKIQRGSNEILDSVPLSLPNYSYESQAVWIRVPPSIKDAVENR 274 T AQ + C+VTTTWFGF +I +GSN++ D+V LSLP YSY+SQAVW+RVP S+K AVE Sbjct: 989 TTAQVHDCRVTTTWFGFRRIWKGSNKVFDTVELSLPTYSYQSQAVWVRVPQSVKTAVEIH 1048 Query: 275 KLSFPAGLHAVAHALCNVVPLFIQCNSSDLASECVNPNEIHYLSEGEIKYRRQKVPERIL 454 + SF AGLHA +HA+ NVVPL++ CNSSDLA EC NP++ Y +PERIL Sbjct: 1049 RFSFRAGLHAASHAVLNVVPLYVICNSSDLAPECSNPHDTRY------------IPERIL 1096 Query: 455 LYDQHPGGSGVSAQ------LQPRFREILVASLELITTCRCSVETGCPSCVQSFSCHEYN 616 LYD HPGG+G SAQ ++ F E+L A+LEL+ +C C+ +TGCP+C+Q+ +C EYN Sbjct: 1097 LYDPHPGGTGFSAQANTSLSVRSHFTELLTAALELLMSCCCTGDTGCPNCIQNLACGEYN 1156 Query: 617 EVLHKNXXXXXXXXXXXXXXSYSGRGH 697 E+LHK+ SY G GH Sbjct: 1157 ELLHKDAAIMIIKGVLEAEESYFG-GH 1182