BLASTX nr result

ID: Coptis25_contig00031169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031169
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|2...   343   1e-92
ref|XP_003552018.1| PREDICTED: probable polygalacturonase non-ca...   342   3e-92
ref|XP_003519820.1| PREDICTED: probable polygalacturonase non-ca...   342   3e-92
ref|XP_003532010.1| PREDICTED: probable polygalacturonase non-ca...   339   3e-91
ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|2...   337   1e-90

>ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|222851597|gb|EEE89144.1|
            predicted protein [Populus trichocarpa]
          Length = 598

 Score =  343 bits (881), Expect = 1e-92
 Identities = 157/209 (75%), Positives = 185/209 (88%)
 Frame = -2

Query: 634  KQGTVMPMPDIRDKMPKRSFLPRTISSKLPFSMKRVAELKQIFRASENSSMEKFIEDTVQ 455
            K+G+VMPMPDIRDKMPKRSFLPR+I SKLPFS  ++ +LK+IF AS+NSSME+ I D ++
Sbjct: 390  KKGSVMPMPDIRDKMPKRSFLPRSIISKLPFSTSKIDQLKEIFHASDNSSMERIILDALE 449

Query: 454  ECERKPSPGESKQCAGSIEDMIDFAVSVLGHNLVVRSTENVQGSKKDVMIGEVKGINGGK 275
            ECER PSPGE+K+CAGS EDMIDFA SVLG N+ VR+T+NV GSKK++MIG +KGINGG+
Sbjct: 450  ECERSPSPGETKRCAGSAEDMIDFATSVLGRNVAVRTTDNVNGSKKNIMIGSIKGINGGR 509

Query: 274  VTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAKINKGVAICHLDTTSWSPTHG 95
            VT+SVSCHQ+L+PYL+YYCHSVPKVRVYEAD+LD   KA IN GVAICHLDT+SWSPTHG
Sbjct: 510  VTRSVSCHQTLYPYLLYYCHSVPKVRVYEADLLDPNSKATINHGVAICHLDTSSWSPTHG 569

Query: 94   AFVALGSSPGHTEVCHWIFENDMTWAIAD 8
            AF+ALGS PG  EVCHWIFENDMTW IA+
Sbjct: 570  AFLALGSGPGRIEVCHWIFENDMTWTIAE 598


>ref|XP_003552018.1| PREDICTED: probable polygalacturonase non-catalytic subunit
            JP650-like [Glycine max]
          Length = 622

 Score =  342 bits (877), Expect = 3e-92
 Identities = 159/209 (76%), Positives = 183/209 (87%)
 Frame = -2

Query: 634  KQGTVMPMPDIRDKMPKRSFLPRTISSKLPFSMKRVAELKQIFRASENSSMEKFIEDTVQ 455
            K+GTVMPMPDIRDKMPKRSFLPR I +KLPFS  +V ELK++F+ SENSSM+K I D++ 
Sbjct: 414  KEGTVMPMPDIRDKMPKRSFLPRAILTKLPFSSAKVDELKRVFKVSENSSMDKMIMDSLG 473

Query: 454  ECERKPSPGESKQCAGSIEDMIDFAVSVLGHNLVVRSTENVQGSKKDVMIGEVKGINGGK 275
            ECER PS GE+K+C  S+EDMIDF+ SVLG N+ V +TENV+GS K+VM+G VKG+NGGK
Sbjct: 474  ECERAPSVGETKRCVASVEDMIDFSTSVLGRNVAVWTTENVKGSNKNVMVGRVKGMNGGK 533

Query: 274  VTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAKINKGVAICHLDTTSWSPTHG 95
            VTKSVSCHQSLFPYL+YYCHSVPKVRVYEAD+LD E KAKIN GVAICHLDTT+WSPTHG
Sbjct: 534  VTKSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPESKAKINHGVAICHLDTTAWSPTHG 593

Query: 94   AFVALGSSPGHTEVCHWIFENDMTWAIAD 8
            AF+ALGS PG  EVCHWIFEND+TW IAD
Sbjct: 594  AFLALGSGPGRIEVCHWIFENDLTWTIAD 622


>ref|XP_003519820.1| PREDICTED: probable polygalacturonase non-catalytic subunit
            JP650-like [Glycine max]
          Length = 611

 Score =  342 bits (877), Expect = 3e-92
 Identities = 154/209 (73%), Positives = 187/209 (89%)
 Frame = -2

Query: 634  KQGTVMPMPDIRDKMPKRSFLPRTISSKLPFSMKRVAELKQIFRASENSSMEKFIEDTVQ 455
            K+GTVMPMPDI+DKMP+RSFLPR+I SKLPFS+ ++ ELKQ+F+AS+N SMEK ++D+++
Sbjct: 403  KEGTVMPMPDIKDKMPERSFLPRSILSKLPFSVSKIDELKQVFKASDNGSMEKMMKDSLE 462

Query: 454  ECERKPSPGESKQCAGSIEDMIDFAVSVLGHNLVVRSTENVQGSKKDVMIGEVKGINGGK 275
            ECER PS GE+K+C GS+EDMIDFA SVLG N+ VR+T+NV GSKK V++G V+GINGGK
Sbjct: 463  ECERAPSSGETKRCVGSLEDMIDFATSVLGRNVAVRTTQNVNGSKKSVVVGPVRGINGGK 522

Query: 274  VTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAKINKGVAICHLDTTSWSPTHG 95
            VT+SVSCHQSLFPYL+YYCH+VPKVRVYEAD+LD + KAKIN+GVAICHLDT+ WSPTHG
Sbjct: 523  VTQSVSCHQSLFPYLLYYCHAVPKVRVYEADLLDPKTKAKINRGVAICHLDTSDWSPTHG 582

Query: 94   AFVALGSSPGHTEVCHWIFENDMTWAIAD 8
            AF++LGS PG  EVCHWIFENDM W IAD
Sbjct: 583  AFLSLGSVPGRIEVCHWIFENDMAWTIAD 611


>ref|XP_003532010.1| PREDICTED: probable polygalacturonase non-catalytic subunit
            JP650-like [Glycine max]
          Length = 627

 Score =  339 bits (869), Expect = 3e-91
 Identities = 157/209 (75%), Positives = 183/209 (87%)
 Frame = -2

Query: 634  KQGTVMPMPDIRDKMPKRSFLPRTISSKLPFSMKRVAELKQIFRASENSSMEKFIEDTVQ 455
            K GT+MPMPDIRDKMPKRSFLPR+I +KLPFS  +V ELK++F+ S+NSSMEK I D++ 
Sbjct: 419  KDGTLMPMPDIRDKMPKRSFLPRSILTKLPFSSSKVHELKRLFKVSDNSSMEKMIMDSLG 478

Query: 454  ECERKPSPGESKQCAGSIEDMIDFAVSVLGHNLVVRSTENVQGSKKDVMIGEVKGINGGK 275
            ECER PS GE+K+C GSIEDMIDF+ SVLG N+ V +TENV GS K+VM+G VKG+NGGK
Sbjct: 479  ECERVPSMGETKRCVGSIEDMIDFSTSVLGRNVAVWTTENVNGSNKNVMVGRVKGMNGGK 538

Query: 274  VTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAKINKGVAICHLDTTSWSPTHG 95
            VT+SVSCHQSLFPY++YYCHSVPKVRVY+AD+LD E KAKIN GVAICHLDTT+WSPTHG
Sbjct: 539  VTQSVSCHQSLFPYMLYYCHSVPKVRVYQADLLDPESKAKINHGVAICHLDTTAWSPTHG 598

Query: 94   AFVALGSSPGHTEVCHWIFENDMTWAIAD 8
            AF+ALGS PG  EVCHWIFEND+TW IAD
Sbjct: 599  AFMALGSGPGRIEVCHWIFENDLTWTIAD 627


>ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|222863660|gb|EEF00791.1|
            predicted protein [Populus trichocarpa]
          Length = 615

 Score =  337 bits (863), Expect = 1e-90
 Identities = 153/209 (73%), Positives = 182/209 (87%)
 Frame = -2

Query: 634  KQGTVMPMPDIRDKMPKRSFLPRTISSKLPFSMKRVAELKQIFRASENSSMEKFIEDTVQ 455
            K+G+ MPMPDIRDKMPKRSFLPR+I SK+PFS  ++  +K+IF AS+NSSME+ I D V+
Sbjct: 405  KEGSEMPMPDIRDKMPKRSFLPRSIISKIPFSTSKMGLIKEIFHASDNSSMERIILDAVE 464

Query: 454  ECERKPSPGESKQCAGSIEDMIDFAVSVLGHNLVVRSTENVQGSKKDVMIGEVKGINGGK 275
            ECER PSPGE+K+C GS ED+IDF +SVLG N+ VR+T+NV+GSKK+V IG +KGINGG+
Sbjct: 465  ECERAPSPGETKRCVGSAEDLIDFVISVLGRNVAVRTTDNVEGSKKNVTIGTIKGINGGR 524

Query: 274  VTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAKINKGVAICHLDTTSWSPTHG 95
            VTKSVSCHQSL+PYL+YYCHSVPKVRVYEAD+LD   K KIN GVAICHLDT+SWSPTHG
Sbjct: 525  VTKSVSCHQSLYPYLLYYCHSVPKVRVYEADLLDPNSKTKINHGVAICHLDTSSWSPTHG 584

Query: 94   AFVALGSSPGHTEVCHWIFENDMTWAIAD 8
            AF+ALGS PG  EVCHWIFENDMTW +A+
Sbjct: 585  AFLALGSGPGRIEVCHWIFENDMTWTLAE 613


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