BLASTX nr result
ID: Coptis25_contig00031169
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00031169 (635 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|2... 343 1e-92 ref|XP_003552018.1| PREDICTED: probable polygalacturonase non-ca... 342 3e-92 ref|XP_003519820.1| PREDICTED: probable polygalacturonase non-ca... 342 3e-92 ref|XP_003532010.1| PREDICTED: probable polygalacturonase non-ca... 339 3e-91 ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|2... 337 1e-90 >ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|222851597|gb|EEE89144.1| predicted protein [Populus trichocarpa] Length = 598 Score = 343 bits (881), Expect = 1e-92 Identities = 157/209 (75%), Positives = 185/209 (88%) Frame = -2 Query: 634 KQGTVMPMPDIRDKMPKRSFLPRTISSKLPFSMKRVAELKQIFRASENSSMEKFIEDTVQ 455 K+G+VMPMPDIRDKMPKRSFLPR+I SKLPFS ++ +LK+IF AS+NSSME+ I D ++ Sbjct: 390 KKGSVMPMPDIRDKMPKRSFLPRSIISKLPFSTSKIDQLKEIFHASDNSSMERIILDALE 449 Query: 454 ECERKPSPGESKQCAGSIEDMIDFAVSVLGHNLVVRSTENVQGSKKDVMIGEVKGINGGK 275 ECER PSPGE+K+CAGS EDMIDFA SVLG N+ VR+T+NV GSKK++MIG +KGINGG+ Sbjct: 450 ECERSPSPGETKRCAGSAEDMIDFATSVLGRNVAVRTTDNVNGSKKNIMIGSIKGINGGR 509 Query: 274 VTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAKINKGVAICHLDTTSWSPTHG 95 VT+SVSCHQ+L+PYL+YYCHSVPKVRVYEAD+LD KA IN GVAICHLDT+SWSPTHG Sbjct: 510 VTRSVSCHQTLYPYLLYYCHSVPKVRVYEADLLDPNSKATINHGVAICHLDTSSWSPTHG 569 Query: 94 AFVALGSSPGHTEVCHWIFENDMTWAIAD 8 AF+ALGS PG EVCHWIFENDMTW IA+ Sbjct: 570 AFLALGSGPGRIEVCHWIFENDMTWTIAE 598 >ref|XP_003552018.1| PREDICTED: probable polygalacturonase non-catalytic subunit JP650-like [Glycine max] Length = 622 Score = 342 bits (877), Expect = 3e-92 Identities = 159/209 (76%), Positives = 183/209 (87%) Frame = -2 Query: 634 KQGTVMPMPDIRDKMPKRSFLPRTISSKLPFSMKRVAELKQIFRASENSSMEKFIEDTVQ 455 K+GTVMPMPDIRDKMPKRSFLPR I +KLPFS +V ELK++F+ SENSSM+K I D++ Sbjct: 414 KEGTVMPMPDIRDKMPKRSFLPRAILTKLPFSSAKVDELKRVFKVSENSSMDKMIMDSLG 473 Query: 454 ECERKPSPGESKQCAGSIEDMIDFAVSVLGHNLVVRSTENVQGSKKDVMIGEVKGINGGK 275 ECER PS GE+K+C S+EDMIDF+ SVLG N+ V +TENV+GS K+VM+G VKG+NGGK Sbjct: 474 ECERAPSVGETKRCVASVEDMIDFSTSVLGRNVAVWTTENVKGSNKNVMVGRVKGMNGGK 533 Query: 274 VTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAKINKGVAICHLDTTSWSPTHG 95 VTKSVSCHQSLFPYL+YYCHSVPKVRVYEAD+LD E KAKIN GVAICHLDTT+WSPTHG Sbjct: 534 VTKSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPESKAKINHGVAICHLDTTAWSPTHG 593 Query: 94 AFVALGSSPGHTEVCHWIFENDMTWAIAD 8 AF+ALGS PG EVCHWIFEND+TW IAD Sbjct: 594 AFLALGSGPGRIEVCHWIFENDLTWTIAD 622 >ref|XP_003519820.1| PREDICTED: probable polygalacturonase non-catalytic subunit JP650-like [Glycine max] Length = 611 Score = 342 bits (877), Expect = 3e-92 Identities = 154/209 (73%), Positives = 187/209 (89%) Frame = -2 Query: 634 KQGTVMPMPDIRDKMPKRSFLPRTISSKLPFSMKRVAELKQIFRASENSSMEKFIEDTVQ 455 K+GTVMPMPDI+DKMP+RSFLPR+I SKLPFS+ ++ ELKQ+F+AS+N SMEK ++D+++ Sbjct: 403 KEGTVMPMPDIKDKMPERSFLPRSILSKLPFSVSKIDELKQVFKASDNGSMEKMMKDSLE 462 Query: 454 ECERKPSPGESKQCAGSIEDMIDFAVSVLGHNLVVRSTENVQGSKKDVMIGEVKGINGGK 275 ECER PS GE+K+C GS+EDMIDFA SVLG N+ VR+T+NV GSKK V++G V+GINGGK Sbjct: 463 ECERAPSSGETKRCVGSLEDMIDFATSVLGRNVAVRTTQNVNGSKKSVVVGPVRGINGGK 522 Query: 274 VTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAKINKGVAICHLDTTSWSPTHG 95 VT+SVSCHQSLFPYL+YYCH+VPKVRVYEAD+LD + KAKIN+GVAICHLDT+ WSPTHG Sbjct: 523 VTQSVSCHQSLFPYLLYYCHAVPKVRVYEADLLDPKTKAKINRGVAICHLDTSDWSPTHG 582 Query: 94 AFVALGSSPGHTEVCHWIFENDMTWAIAD 8 AF++LGS PG EVCHWIFENDM W IAD Sbjct: 583 AFLSLGSVPGRIEVCHWIFENDMAWTIAD 611 >ref|XP_003532010.1| PREDICTED: probable polygalacturonase non-catalytic subunit JP650-like [Glycine max] Length = 627 Score = 339 bits (869), Expect = 3e-91 Identities = 157/209 (75%), Positives = 183/209 (87%) Frame = -2 Query: 634 KQGTVMPMPDIRDKMPKRSFLPRTISSKLPFSMKRVAELKQIFRASENSSMEKFIEDTVQ 455 K GT+MPMPDIRDKMPKRSFLPR+I +KLPFS +V ELK++F+ S+NSSMEK I D++ Sbjct: 419 KDGTLMPMPDIRDKMPKRSFLPRSILTKLPFSSSKVHELKRLFKVSDNSSMEKMIMDSLG 478 Query: 454 ECERKPSPGESKQCAGSIEDMIDFAVSVLGHNLVVRSTENVQGSKKDVMIGEVKGINGGK 275 ECER PS GE+K+C GSIEDMIDF+ SVLG N+ V +TENV GS K+VM+G VKG+NGGK Sbjct: 479 ECERVPSMGETKRCVGSIEDMIDFSTSVLGRNVAVWTTENVNGSNKNVMVGRVKGMNGGK 538 Query: 274 VTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAKINKGVAICHLDTTSWSPTHG 95 VT+SVSCHQSLFPY++YYCHSVPKVRVY+AD+LD E KAKIN GVAICHLDTT+WSPTHG Sbjct: 539 VTQSVSCHQSLFPYMLYYCHSVPKVRVYQADLLDPESKAKINHGVAICHLDTTAWSPTHG 598 Query: 94 AFVALGSSPGHTEVCHWIFENDMTWAIAD 8 AF+ALGS PG EVCHWIFEND+TW IAD Sbjct: 599 AFMALGSGPGRIEVCHWIFENDLTWTIAD 627 >ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|222863660|gb|EEF00791.1| predicted protein [Populus trichocarpa] Length = 615 Score = 337 bits (863), Expect = 1e-90 Identities = 153/209 (73%), Positives = 182/209 (87%) Frame = -2 Query: 634 KQGTVMPMPDIRDKMPKRSFLPRTISSKLPFSMKRVAELKQIFRASENSSMEKFIEDTVQ 455 K+G+ MPMPDIRDKMPKRSFLPR+I SK+PFS ++ +K+IF AS+NSSME+ I D V+ Sbjct: 405 KEGSEMPMPDIRDKMPKRSFLPRSIISKIPFSTSKMGLIKEIFHASDNSSMERIILDAVE 464 Query: 454 ECERKPSPGESKQCAGSIEDMIDFAVSVLGHNLVVRSTENVQGSKKDVMIGEVKGINGGK 275 ECER PSPGE+K+C GS ED+IDF +SVLG N+ VR+T+NV+GSKK+V IG +KGINGG+ Sbjct: 465 ECERAPSPGETKRCVGSAEDLIDFVISVLGRNVAVRTTDNVEGSKKNVTIGTIKGINGGR 524 Query: 274 VTKSVSCHQSLFPYLVYYCHSVPKVRVYEADILDVEIKAKINKGVAICHLDTTSWSPTHG 95 VTKSVSCHQSL+PYL+YYCHSVPKVRVYEAD+LD K KIN GVAICHLDT+SWSPTHG Sbjct: 525 VTKSVSCHQSLYPYLLYYCHSVPKVRVYEADLLDPNSKTKINHGVAICHLDTSSWSPTHG 584 Query: 94 AFVALGSSPGHTEVCHWIFENDMTWAIAD 8 AF+ALGS PG EVCHWIFENDMTW +A+ Sbjct: 585 AFLALGSGPGRIEVCHWIFENDMTWTLAE 613