BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031160
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...   126   2e-27
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
gb|ABK92768.1| unknown [Populus trichocarpa]                          118   4e-25
ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm...   110   1e-22
ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc...   106   2e-21

>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
           gi|296088512|emb|CBI37503.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  126 bits (317), Expect = 2e-27
 Identities = 70/148 (47%), Positives = 87/148 (58%), Gaps = 2/148 (1%)
 Frame = +2

Query: 2   WLIGPP--PMPANGFSAMCIGESDGDLHYIEISEAGIRDWFLEGCSDESTWFLKRSISRT 175
           WLI  P   +       MCIGES G LHYI ISE G++ W LE   D S W L  S +  
Sbjct: 231 WLISAPFPTIHLTAIPEMCIGESRGRLHYIMISEDGLQVWALEDYYD-SNWSLVHSTTLE 289

Query: 176 IMEEEHPSVFQNMAKRVTMAMNTDPKPWLDPLAFKDGILFMTVCAKVYSYNLDTRKINEL 355
           +MEEE+  +  N   RV   ++ D  PW+DPLAFKDG+L M V  K+  Y + TRK+ EL
Sbjct: 290 VMEEENSQLLYNTRDRVAQRISIDSIPWMDPLAFKDGLLLMRVSTKIILYCIGTRKMEEL 349

Query: 356 CRLDCLGPNSFGIGSPIALPYSLSLVPL 439
           C L  LG NS  I  P+ +PYSL+L PL
Sbjct: 350 CNLSKLGRNS--IFGPLVIPYSLNLAPL 375


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  118 bits (296), Expect = 4e-25
 Identities = 63/143 (44%), Positives = 88/143 (61%), Gaps = 3/143 (2%)
 Frame = +2

Query: 20  PMPANGFSAM---CIGESDGDLHYIEISEAGIRDWFLEGCSDESTWFLKRSISRTIMEEE 190
           P+PA  F+     CIGES+G L+Y+ ISE G+  W LE   D STW LK S +   +E+E
Sbjct: 238 PLPAGEFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYFD-STWSLKYSKTLAQIEKE 296

Query: 191 HPSVFQNMAKRVTMAMNTDPKPWLDPLAFKDGILFMTVCAKVYSYNLDTRKINELCRLDC 370
           H  +  N+  RV +    D +PW+DPLAFKDG+L + +   +Y Y++DT K+ E+     
Sbjct: 297 HSDIMINLYNRVMLWQRIDDRPWMDPLAFKDGVLVVRISNTIYLYHVDTSKMEEVGETSK 356

Query: 371 LGPNSFGIGSPIALPYSLSLVPL 439
            G  S+   SPI LPY++SLVPL
Sbjct: 357 FGAMSW--VSPIVLPYTMSLVPL 377


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score =  118 bits (296), Expect = 4e-25
 Identities = 63/143 (44%), Positives = 88/143 (61%), Gaps = 3/143 (2%)
 Frame = +2

Query: 20  PMPANGFSAM---CIGESDGDLHYIEISEAGIRDWFLEGCSDESTWFLKRSISRTIMEEE 190
           P+PA  F+     CIGES+G L+Y+ ISE G+  W LE   D STW LK S +   +E+E
Sbjct: 238 PLPAGEFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYFD-STWSLKYSKTLAQIEKE 296

Query: 191 HPSVFQNMAKRVTMAMNTDPKPWLDPLAFKDGILFMTVCAKVYSYNLDTRKINELCRLDC 370
           H  +  N+  RV +    D +PW+DPLAFKDG+L + +   +Y Y++DT K+ E+     
Sbjct: 297 HSDIMINLYNRVMLWQRIDDRPWMDPLAFKDGVLVVRISNTIYLYHVDTSKMEEVGETSK 356

Query: 371 LGPNSFGIGSPIALPYSLSLVPL 439
            G  S+   SPI LPY++SLVPL
Sbjct: 357 FGAMSW--VSPIVLPYTMSLVPL 377


>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
           gi|223535221|gb|EEF36899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 375

 Score =  110 bits (275), Expect = 1e-22
 Identities = 64/143 (44%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
 Frame = +2

Query: 20  PMPANGFSAM---CIGESDGDLHYIEISEAGIRDWFLEGCSDESTWFLKRSISRTIMEEE 190
           P+PA  FS     CIGE +G LHY+ ISE G   W LE    E  W LK S +   ME+E
Sbjct: 232 PVPAAEFSTAPKACIGELEGCLHYVMISEEGFHIWSLEDYF-ELNWLLKYSKTLAEMEQE 290

Query: 191 HPSVFQNMAKRVTMAMNTDPKPWLDPLAFKDGILFMTVCAKVYSYNLDTRKINELCRLDC 370
           HP    NM + V + M  D  PW+D LAFKDGIL + V   VY Y++   K+ E+C    
Sbjct: 291 HPKFLLNMQELVKLQMTDDVSPWVDSLAFKDGILVLRVSTIVYLYDIIRSKMQEVCDNSK 350

Query: 371 LGPNSFGIGSPIALPYSLSLVPL 439
            G +S  +  P  LPYS++LVPL
Sbjct: 351 FGTSS--MYCPTVLPYSMTLVPL 371


>ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 398

 Score =  106 bits (265), Expect = 2e-21
 Identities = 62/150 (41%), Positives = 89/150 (59%), Gaps = 4/150 (2%)
 Frame = +2

Query: 5   LIGPPPMPANGF----SAMCIGESDGDLHYIEISEAGIRDWFLEGCSDESTWFLKRSISR 172
           L+ P P+PA          CIGES G LH+I I E GI  W L+    E+ W LK S   
Sbjct: 236 LLVPSPIPALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCLDDYF-EAKWTLKHSKQL 294

Query: 173 TIMEEEHPSVFQNMAKRVTMAMNTDPKPWLDPLAFKDGILFMTVCAKVYSYNLDTRKINE 352
            ++E+E+P++F  + K +        +P++DP AFKD +L M V + VY Y+++T K+ E
Sbjct: 295 QMIEDENPNMFFKLYKIMQRRRLPGMEPYMDPWAFKDEVLLMRVFSTVYFYHIETGKVVE 354

Query: 353 LCRLDCLGPNSFGIGSPIALPYSLSLVPLE 442
           +C +  LGPN F   SP  +PYSLSL+PL+
Sbjct: 355 VCNVASLGPNPF--VSPPVIPYSLSLIPLD 382