BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031137
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi...    88   6e-16
emb|CBI31710.3| unnamed protein product [Vitis vinifera]               88   6e-16
emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]    88   6e-16
ref|XP_002311155.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|NP_181492.1| pentatricopeptide repeat-containing protein [Ar...    74   2e-11

>ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/85 (52%), Positives = 60/85 (70%)
 Frame = +1

Query: 79  LRSCKDLKTLLQIHAQLLISGYKQNNITNTQLVNSYSQLKKPDSARLVFDTCINPSVILW 258
           L SCK L  LLQIHAQ+++SG+K ++ + T L+N YS   K D AR VFD+  NPS ILW
Sbjct: 39  LSSCKHLNPLLQIHAQIIVSGFKHHH-SITHLINLYSLFHKCDLARSVFDSTPNPSRILW 97

Query: 259 NTTIKTYNRNFQSKEAIKMYYKMLE 333
           N+ I+ Y R+ Q  EA++MYY M+E
Sbjct: 98  NSMIRAYTRSKQYNEALEMYYCMVE 122


>emb|CBI31710.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/85 (52%), Positives = 60/85 (70%)
 Frame = +1

Query: 79  LRSCKDLKTLLQIHAQLLISGYKQNNITNTQLVNSYSQLKKPDSARLVFDTCINPSVILW 258
           L SCK L  LLQIHAQ+++SG+K ++ + T L+N YS   K D AR VFD+  NPS ILW
Sbjct: 59  LSSCKHLNPLLQIHAQIIVSGFKHHH-SITHLINLYSLFHKCDLARSVFDSTPNPSRILW 117

Query: 259 NTTIKTYNRNFQSKEAIKMYYKMLE 333
           N+ I+ Y R+ Q  EA++MYY M+E
Sbjct: 118 NSMIRAYTRSKQYNEALEMYYCMVE 142


>emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/85 (52%), Positives = 60/85 (70%)
 Frame = +1

Query: 79  LRSCKDLKTLLQIHAQLLISGYKQNNITNTQLVNSYSQLKKPDSARLVFDTCINPSVILW 258
           L SCK L  LLQIHAQ+++SG+K ++ + T L+N YS   K D AR VFD+  NPS ILW
Sbjct: 39  LSSCKHLNPLLQIHAQIIVSGFKHHH-SITHLINLYSLFHKCDLARSVFDSTPNPSRILW 97

Query: 259 NTTIKTYNRNFQSKEAIKMYYKMLE 333
           N+ I+ Y R+ Q  EA++MYY M+E
Sbjct: 98  NSMIRAYTRSKQYNEALEMYYCMVE 122


>ref|XP_002311155.1| predicted protein [Populus trichocarpa] gi|222850975|gb|EEE88522.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/90 (43%), Positives = 59/90 (65%)
 Frame = +1

Query: 61  SQVIYTLRSCKDLKTLLQIHAQLLISGYKQNNITNTQLVNSYSQLKKPDSARLVFDTCIN 240
           S  +  L SCK L +LLQIH +L +SG + +++TN  L+ SY    K + AR +FD+  N
Sbjct: 34  SNYVSLLSSCKTLNSLLQIHVRLTVSGLQNDHLTNAHLIKSYLLFLKCNYARFLFDSLPN 93

Query: 241 PSVILWNTTIKTYNRNFQSKEAIKMYYKML 330
           PSV+L+N+ I+ Y+R    +EAI +Y+ ML
Sbjct: 94  PSVMLYNSIIRAYSRTKNHQEAINIYHCML 123


>ref|NP_181492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75099847|sp|O80647.1|PP195_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g39620 gi|3355489|gb|AAC27851.1| hypothetical protein
           [Arabidopsis thaliana] gi|330254604|gb|AEC09698.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 836

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/91 (37%), Positives = 58/91 (63%)
 Frame = +1

Query: 61  SQVIYTLRSCKDLKTLLQIHAQLLISGYKQNNITNTQLVNSYSQLKKPDSARLVFDTCIN 240
           + ++  LR CK+ + LLQ+H  L++SG K +N    QL+N+YS  ++ D +R++FD+  +
Sbjct: 6   TNLLLMLRECKNFRCLLQVHGSLIVSGLKPHN----QLINAYSLFQRQDLSRVIFDSVRD 61

Query: 241 PSVILWNTTIKTYNRNFQSKEAIKMYYKMLE 333
           P V+LWN+ I+ Y R    +EA+  +  M E
Sbjct: 62  PGVVLWNSMIRGYTRAGLHREALGFFGYMSE 92