BLASTX nr result
ID: Coptis25_contig00031127
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00031127 (790 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI21495.3| unnamed protein product [Vitis vinifera] 252 6e-65 ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268... 252 6e-65 ref|XP_002532942.1| conserved hypothetical protein [Ricinus comm... 243 3e-62 gb|AAM62516.1| unknown [Arabidopsis thaliana] 188 1e-45 ref|NP_201300.1| Mitochondrial transcription termination factor ... 187 2e-45 >emb|CBI21495.3| unnamed protein product [Vitis vinifera] Length = 369 Score = 252 bits (644), Expect = 6e-65 Identities = 132/263 (50%), Positives = 187/263 (71%), Gaps = 2/263 (0%) Frame = +3 Query: 6 RFWWAKNPDNIETVVTLLKQHGFSDAHIESTVKTTPQILFAKINKTLIPKLKFFQENLGL 185 RFWWAK+ +N ++V+ L+ GFS+AHI ++V+ PQILF+ I+KTL PK++FF E LGL Sbjct: 50 RFWWAKSTENPQSVIHFLRDLGFSEAHIRTSVRVGPQILFSDIDKTLKPKVQFF-EQLGL 108 Query: 186 RDSDLGLFLSKNATLFTQSLERKLIPNTEILLKILSGDRKA--LIWIIGKRKWILYKFPK 359 +DLG F+SKN+ + T SLE+KL+P EIL K LS D LI ++ + W+L + P+ Sbjct: 109 VGADLGKFISKNSKVLTISLEKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPE 168 Query: 360 SSLLVNIGLLEKYGIVGSQLSMIVKSRPILLVLEESKLCDLCREVERMGFSSKSRMFVHG 539 LL NI LE GIVGSQLSM++ +P L V+++S L DL MGFS +SRM V+ Sbjct: 169 L-LLSNIAFLESCGIVGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYA 227 Query: 540 LLTLSCMSSETIRNKLEVFQSFGYSKEECVGMFRKAPGMPRVSVEKLRLGLEFFLKGIGF 719 L T+SC+ ET+R K E+F+S+G++++EC+ MFR+ PG+ R S EKL+LG+EFF+ + F Sbjct: 228 LYTISCLRDETLRKKFELFRSWGFTEQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKF 287 Query: 720 ERDVLLRMPRLLMYSMEKRVIPR 788 E+ +L+ P +LM SME RVIPR Sbjct: 288 EKTLLVHRPTILMLSMEDRVIPR 310 >ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera] Length = 388 Score = 252 bits (644), Expect = 6e-65 Identities = 132/263 (50%), Positives = 187/263 (71%), Gaps = 2/263 (0%) Frame = +3 Query: 6 RFWWAKNPDNIETVVTLLKQHGFSDAHIESTVKTTPQILFAKINKTLIPKLKFFQENLGL 185 RFWWAK+ +N ++V+ L+ GFS+AHI ++V+ PQILF+ I+KTL PK++FF E LGL Sbjct: 69 RFWWAKSTENPQSVIHFLRDLGFSEAHIRTSVRVGPQILFSDIDKTLKPKVQFF-EQLGL 127 Query: 186 RDSDLGLFLSKNATLFTQSLERKLIPNTEILLKILSGDRKA--LIWIIGKRKWILYKFPK 359 +DLG F+SKN+ + T SLE+KL+P EIL K LS D LI ++ + W+L + P+ Sbjct: 128 VGADLGKFISKNSKVLTISLEKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPE 187 Query: 360 SSLLVNIGLLEKYGIVGSQLSMIVKSRPILLVLEESKLCDLCREVERMGFSSKSRMFVHG 539 LL NI LE GIVGSQLSM++ +P L V+++S L DL MGFS +SRM V+ Sbjct: 188 L-LLSNIAFLESCGIVGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYA 246 Query: 540 LLTLSCMSSETIRNKLEVFQSFGYSKEECVGMFRKAPGMPRVSVEKLRLGLEFFLKGIGF 719 L T+SC+ ET+R K E+F+S+G++++EC+ MFR+ PG+ R S EKL+LG+EFF+ + F Sbjct: 247 LYTISCLRDETLRKKFELFRSWGFTEQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKF 306 Query: 720 ERDVLLRMPRLLMYSMEKRVIPR 788 E+ +L+ P +LM SME RVIPR Sbjct: 307 EKTLLVHRPTILMLSMEDRVIPR 329 >ref|XP_002532942.1| conserved hypothetical protein [Ricinus communis] gi|223527293|gb|EEF29446.1| conserved hypothetical protein [Ricinus communis] Length = 366 Score = 243 bits (620), Expect = 3e-62 Identities = 131/263 (49%), Positives = 179/263 (68%), Gaps = 2/263 (0%) Frame = +3 Query: 6 RFWWAKNPDNIETVVTLLKQHGFSDAHIESTVKTTPQILFAKINKTLIPKLKFFQENLGL 185 RF K+ + ++V LK G S++HI+S + PQILFA ++K L PK+K FQ+ LGL Sbjct: 43 RFSHIKSTEKPQSVHYFLKNLGLSNSHIQSAIHGAPQILFANVDKCLKPKVKLFQD-LGL 101 Query: 186 RDSDLGLFLSKNATLFTQSLERKLIPNTEILLKILSGDR--KALIWIIGKRKWILYKFPK 359 DLG F+SKN+TL T SL++KL P EIL ++L D K L+ ++ + WI+ K PK Sbjct: 102 VGYDLGKFISKNSTLLTASLDKKLSPRVEILKRLLLNDENNKDLVKVLTRCNWIISKNPK 161 Query: 360 SSLLVNIGLLEKYGIVGSQLSMIVKSRPILLVLEESKLCDLCREVERMGFSSKSRMFVHG 539 S LL N+ LE GIVGSQLSM+++ +P L +++ES L DL +V MGFS SRM V+ Sbjct: 162 SRLLSNVAFLESCGIVGSQLSMLLRRQPRLFIMQESALRDLVSQVLNMGFSVNSRMLVYA 221 Query: 540 LLTLSCMSSETIRNKLEVFQSFGYSKEECVGMFRKAPGMPRVSVEKLRLGLEFFLKGIGF 719 L T+SCMS ET K+E+ + FG+S+ EC MFRK PG+ R S +KL+LGL+FF+ I F Sbjct: 222 LYTVSCMSHETFGKKIEILKKFGFSEYECTEMFRKQPGLLRSSEKKLKLGLDFFINTIKF 281 Query: 720 ERDVLLRMPRLLMYSMEKRVIPR 788 +R+VL+ P LM SME+RVIPR Sbjct: 282 KREVLVYRPTCLMLSMEERVIPR 304 >gb|AAM62516.1| unknown [Arabidopsis thaliana] Length = 391 Score = 188 bits (477), Expect = 1e-45 Identities = 100/257 (38%), Positives = 163/257 (63%), Gaps = 1/257 (0%) Frame = +3 Query: 21 KNPDNIETVVTLLKQHGFSDAHIESTVKTTPQILFAKINKTLIPKLKFFQENLGLRDSDL 200 K+ + +V+ +LK + FSD I+ +++ P+++F + K L PKL+FF++ +G S L Sbjct: 66 KSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKD-IGFTGSGL 124 Query: 201 GLFLSKNATLFTQSLERKLIPNTEILLKILSGDRKALIWIIGKRKWILY-KFPKSSLLVN 377 G F+S+N+++ SL +KLIP EIL I++ + L I+ + W+L + P LL N Sbjct: 125 GKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPN 184 Query: 378 IGLLEKYGIVGSQLSMIVKSRPILLVLEESKLCDLCREVERMGFSSKSRMFVHGLLTLSC 557 I LE GIVGSQL+ +++ +P + L E KL +GF+ SRM VH +++LS Sbjct: 185 ISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAIISLSS 244 Query: 558 MSSETIRNKLEVFQSFGYSKEECVGMFRKAPGMPRVSVEKLRLGLEFFLKGIGFERDVLL 737 +S +T K+++F + G+S++E + R++PG+ R S +KL LG EF+LK +G ER+ L Sbjct: 245 LSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGIEREALA 304 Query: 738 RMPRLLMYSMEKRVIPR 788 + P +L Y++EKRVIPR Sbjct: 305 KRPCVLSYNLEKRVIPR 321 >ref|NP_201300.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] gi|8843759|dbj|BAA97307.1| unnamed protein product [Arabidopsis thaliana] gi|332010591|gb|AED97974.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] Length = 391 Score = 187 bits (476), Expect = 2e-45 Identities = 100/257 (38%), Positives = 163/257 (63%), Gaps = 1/257 (0%) Frame = +3 Query: 21 KNPDNIETVVTLLKQHGFSDAHIESTVKTTPQILFAKINKTLIPKLKFFQENLGLRDSDL 200 K+ + +V+ +LK + FSD I+ +++ P+++F + K L PKL+FF++ +G S L Sbjct: 66 KSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKD-IGFTGSGL 124 Query: 201 GLFLSKNATLFTQSLERKLIPNTEILLKILSGDRKALIWIIGKRKWILY-KFPKSSLLVN 377 G F+S+N+++ SL +KLIP EIL I++ + L I+ + W+L + P LL N Sbjct: 125 GKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPN 184 Query: 378 IGLLEKYGIVGSQLSMIVKSRPILLVLEESKLCDLCREVERMGFSSKSRMFVHGLLTLSC 557 I LE GIVGSQL+ +++ +P + L E KL +GF+ SRM VH +++LS Sbjct: 185 ISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSS 244 Query: 558 MSSETIRNKLEVFQSFGYSKEECVGMFRKAPGMPRVSVEKLRLGLEFFLKGIGFERDVLL 737 +S +T K+++F + G+S++E + R++PG+ R S +KL LG EF+LK +G ER+ L Sbjct: 245 LSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALA 304 Query: 738 RMPRLLMYSMEKRVIPR 788 + P +L Y++EKRVIPR Sbjct: 305 KRPCVLSYNLEKRVIPR 321