BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031104
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303899.1| predicted protein [Populus trichocarpa] gi|2...   303   2e-80
emb|CBI16200.3| unnamed protein product [Vitis vinifera]              293   1e-77
ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containi...   293   1e-77
ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containi...   293   2e-77
ref|XP_002531100.1| pentatricopeptide repeat-containing protein,...   292   3e-77

>ref|XP_002303899.1| predicted protein [Populus trichocarpa] gi|222841331|gb|EEE78878.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  303 bits (775), Expect = 2e-80
 Identities = 140/197 (71%), Positives = 172/197 (87%)
 Frame = +3

Query: 3   KMRFRLNMVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVD 182
           +M FRLN V+FN+MIKG++EKGEW++A  +F+EMLERKV+P+VVTYNSLIGYLCR GE+D
Sbjct: 161 EMGFRLNSVAFNVMIKGWLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELD 220

Query: 183 KGMELLKDMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLM 362
           K   LL+DM +KGK PNA+T+AL+MEG C +G+ +EAKK+MFDMEYRGCKP +VN+GVLM
Sbjct: 221 KAKGLLEDMIKKGKRPNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLM 280

Query: 363 SDLGKRGEIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGRVSDAYKVLVELQVEGCE 542
           SDLGKRG+I+EA+ +  EMKKR  KPDVVTYNILINYLCKEGR +DAY+VL E+QV GCE
Sbjct: 281 SDLGKRGKIDEAKSVLHEMKKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGCE 340

Query: 543 PNSATYRMVVDGLCAVG 593
            N+ATYRM+VDG C VG
Sbjct: 341 ANAATYRMLVDGFCRVG 357



 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 50/153 (32%), Positives = 84/153 (54%)
 Frame = +3

Query: 24  MVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVDKGMELLK 203
           +V+F +++    ++G+ DEA S+  EM +R ++P VVTYN LI YLC++G      E+L 
Sbjct: 273 VVNFGVLMSDLGKRGKIDEAKSVLHEMKKRHMKPDVVTYNILINYLCKEGRAADAYEVLF 332

Query: 204 DMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLMSDLGKRG 383
           +M   G   NA TY ++++G C +G F    K++  M   G  PR+  +  L+  L K G
Sbjct: 333 EMQVGGCEANAATYRMLVDGFCRVGDFEGGLKVLNAMLTSGHFPRVETFRSLVVGLVKSG 392

Query: 384 EIEEARGLFVEMKKRRFKPDVVTYNILINYLCK 482
            ++ A  +  EM+KR+       +  L+   C+
Sbjct: 393 NLDGACFVLEEMEKRQMMFCADDWEALVMESCR 425



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 48/171 (28%), Positives = 92/171 (53%)
 Frame = +3

Query: 15  RLNMVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVDKGME 194
           R N ++F ++++G    GE +EA  +  +M  R  +PTVV +  L+  L ++G++D+   
Sbjct: 235 RPNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKS 294

Query: 195 LLKDMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLMSDLG 374
           +L +M ++   P+ VTY +++  LC  G+ ++A +++F+M+  GC+     Y +L+    
Sbjct: 295 VLHEMKKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVDGFC 354

Query: 375 KRGEIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGRVSDAYKVLVELQ 527
           + G+ E    +   M      P V T+  L+  L K G +  A  VL E++
Sbjct: 355 RVGDFEGGLKVLNAMLTSGHFPRVETFRSLVVGLVKSGNLDGACFVLEEME 405



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 44/168 (26%), Positives = 87/168 (51%)
 Frame = +3

Query: 78  EACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVDKGMELLKDMSRKGKFPNAVTYALIM 257
           +A  LF  M       T  + NSL+  L   G   +  EL       G   N+V + +++
Sbjct: 116 KAVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNSVAFNVMI 175

Query: 258 EGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLMSDLGKRGEIEEARGLFVEMKKRRFK 437
           +G    G++ +A K+  +M  R  +P +V Y  L+  L + GE+++A+GL  +M K+  +
Sbjct: 176 KGWLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKR 235

Query: 438 PDVVTYNILINYLCKEGRVSDAYKVLVELQVEGCEPNSATYRMVVDGL 581
           P+ +T+ +L+   C  G  ++A K++ +++  GC+P    + +++  L
Sbjct: 236 PNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDL 283


>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score =  293 bits (751), Expect = 1e-77
 Identities = 136/196 (69%), Positives = 172/196 (87%)
 Frame = +3

Query: 3    KMRFRLNMVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVD 182
            KM FR N +SFNI+IKG++ KGEWD+A  +FEEM++++V+PTVVT+NSLIG+LC KG++D
Sbjct: 582  KMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLD 641

Query: 183  KGMELLKDMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLM 362
              M LL+DM +K   PNAVTYAL+MEGLC LGK+ EAKK+MFDM+Y+GCKPRL+N+GVLM
Sbjct: 642  GAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLM 701

Query: 363  SDLGKRGEIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGRVSDAYKVLVELQVEGCE 542
            SDLG+RG I++++ L +EMK+RRFKPDVVTYNILIN+LCKEGR  +AYKVLVE+QV GCE
Sbjct: 702  SDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCE 761

Query: 543  PNSATYRMVVDGLCAV 590
            PN+ATYRM+VDG C V
Sbjct: 762  PNAATYRMMVDGFCQV 777



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 48/156 (30%), Positives = 86/156 (55%)
 Frame = +3

Query: 24   MVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVDKGMELLK 203
            +++F +++     +G  D++ +L  EM  R+ +P VVTYN LI +LC++G   +  ++L 
Sbjct: 694  LLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLV 753

Query: 204  DMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLMSDLGKRG 383
            +M   G  PNA TY ++++G C +  F    K++  M   G  PRL ++  L+  L K G
Sbjct: 754  EMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNG 813

Query: 384  EIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGR 491
            +I+ A  +  EM+KR+ +  +  +  L+   C   R
Sbjct: 814  KIDGACFVLEEMEKRKMRFHLEAWEALVKDACPGDR 849



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 45/192 (23%), Positives = 101/192 (52%)
 Frame = +3

Query: 6    MRFRLNMVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVDK 185
            +  R     F  +I+ Y +    ++A  LF+ M       T+V++N+L+  L        
Sbjct: 513  INIRCRETLFIALIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLD 572

Query: 186  GMELLKDMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLMS 365
             + +    ++ G   N++++ +I++G    G++ +A ++  +M  +  KP +V +  L+ 
Sbjct: 573  AIGIFDRSTKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIG 632

Query: 366  DLGKRGEIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGRVSDAYKVLVELQVEGCEP 545
             L  +G+++ A GL  +M ++R +P+ VTY +L+  LC  G+  +A K++ ++  +GC+P
Sbjct: 633  FLCGKGDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKP 692

Query: 546  NSATYRMVVDGL 581
                + +++  L
Sbjct: 693  RLLNFGVLMSDL 704



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 43/197 (21%), Positives = 97/197 (49%)
 Frame = +3

Query: 3    KMRFRLNMVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVD 182
            +M F+ +  S++ ++        ++   +L + +    ++     + +LI +  +    +
Sbjct: 477  QMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYGKSQMPE 536

Query: 183  KGMELLKDMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLM 362
            K +EL + M         V++  ++  L    +F +A  I       G +   +++ +++
Sbjct: 537  KAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTKMGFRRNSISFNIII 596

Query: 363  SDLGKRGEIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGRVSDAYKVLVELQVEGCE 542
                 +GE ++A  +F EM  +  KP VVT+N LI +LC +G +  A  +L ++  +   
Sbjct: 597  KGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRHR 656

Query: 543  PNSATYRMVVDGLCAVG 593
            PN+ TY ++++GLC++G
Sbjct: 657  PNAVTYALLMEGLCSLG 673



 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 2/147 (1%)
 Frame = +3

Query: 3    KMRFRLNMVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVD 182
            + RF+ ++V++NI+I    ++G   EA  +  EM     +P   TY  ++   C+  + +
Sbjct: 722  RRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDFE 781

Query: 183  KGMELLKDMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLM 362
             G+++L  M   G  P   ++  ++ GL   GK   A  ++ +ME R  +  L  +  L+
Sbjct: 782  GGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKMRFHLEAWEALV 841

Query: 363  SDL--GKRGEIEEARGLFVEMKKRRFK 437
             D   G RG    A GL  E+K+   K
Sbjct: 842  KDACPGDRG----AGGLVRELKQNTTK 864


>ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Vitis vinifera]
          Length = 501

 Score =  293 bits (751), Expect = 1e-77
 Identities = 136/196 (69%), Positives = 172/196 (87%)
 Frame = +3

Query: 3   KMRFRLNMVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVD 182
           KM FR N +SFNI+IKG++ KGEWD+A  +FEEM++++V+PTVVT+NSLIG+LC KG++D
Sbjct: 220 KMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLD 279

Query: 183 KGMELLKDMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLM 362
             M LL+DM +K   PNAVTYAL+MEGLC LGK+ EAKK+MFDM+Y+GCKPRL+N+GVLM
Sbjct: 280 GAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLM 339

Query: 363 SDLGKRGEIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGRVSDAYKVLVELQVEGCE 542
           SDLG+RG I++++ L +EMK+RRFKPDVVTYNILIN+LCKEGR  +AYKVLVE+QV GCE
Sbjct: 340 SDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCE 399

Query: 543 PNSATYRMVVDGLCAV 590
           PN+ATYRM+VDG C V
Sbjct: 400 PNAATYRMMVDGFCQV 415



 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 48/156 (30%), Positives = 86/156 (55%)
 Frame = +3

Query: 24  MVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVDKGMELLK 203
           +++F +++     +G  D++ +L  EM  R+ +P VVTYN LI +LC++G   +  ++L 
Sbjct: 332 LLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLV 391

Query: 204 DMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLMSDLGKRG 383
           +M   G  PNA TY ++++G C +  F    K++  M   G  PRL ++  L+  L K G
Sbjct: 392 EMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNG 451

Query: 384 EIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGR 491
           +I+ A  +  EM+KR+ +  +  +  L+   C   R
Sbjct: 452 KIDGACFVLEEMEKRKMRFHLEAWEALVKDACPGDR 487



 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 45/192 (23%), Positives = 101/192 (52%)
 Frame = +3

Query: 6   MRFRLNMVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVDK 185
           +  R     F  +I+ Y +    ++A  LF+ M       T+V++N+L+  L        
Sbjct: 151 INIRCRETLFIALIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLD 210

Query: 186 GMELLKDMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLMS 365
            + +    ++ G   N++++ +I++G    G++ +A ++  +M  +  KP +V +  L+ 
Sbjct: 211 AIGIFDRSTKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIG 270

Query: 366 DLGKRGEIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGRVSDAYKVLVELQVEGCEP 545
            L  +G+++ A GL  +M ++R +P+ VTY +L+  LC  G+  +A K++ ++  +GC+P
Sbjct: 271 FLCGKGDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKP 330

Query: 546 NSATYRMVVDGL 581
               + +++  L
Sbjct: 331 RLLNFGVLMSDL 342



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 43/197 (21%), Positives = 97/197 (49%)
 Frame = +3

Query: 3   KMRFRLNMVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVD 182
           +M F+ +  S++ ++        ++   +L + +    ++     + +LI +  +    +
Sbjct: 115 QMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRCRETLFIALIQHYGKSQMPE 174

Query: 183 KGMELLKDMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLM 362
           K +EL + M         V++  ++  L    +F +A  I       G +   +++ +++
Sbjct: 175 KAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTKMGFRRNSISFNIII 234

Query: 363 SDLGKRGEIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGRVSDAYKVLVELQVEGCE 542
                +GE ++A  +F EM  +  KP VVT+N LI +LC +G +  A  +L ++  +   
Sbjct: 235 KGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRHR 294

Query: 543 PNSATYRMVVDGLCAVG 593
           PN+ TY ++++GLC++G
Sbjct: 295 PNAVTYALLMEGLCSLG 311


>ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
           mitochondrial-like [Glycine max]
          Length = 449

 Score =  293 bits (750), Expect = 2e-77
 Identities = 136/197 (69%), Positives = 168/197 (85%)
 Frame = +3

Query: 3   KMRFRLNMVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVD 182
           +M FR N V+FNIM+KG + KGEW +AC +F+EML+++VQP+VVTYNSLIG+LCRKG++D
Sbjct: 168 EMGFRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRKGDLD 227

Query: 183 KGMELLKDMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLM 362
           K M LL+DM +KGK  N VTYAL+MEGLC + K  EAKK+MFDM YRGCK + VN+GVLM
Sbjct: 228 KAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLM 287

Query: 363 SDLGKRGEIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGRVSDAYKVLVELQVEGCE 542
           +DLGKRG++EEA+ L  EMKKRR KPDVVTYNILINYLCKEG+  +AYKVL+E+Q+ GC 
Sbjct: 288 NDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCV 347

Query: 543 PNSATYRMVVDGLCAVG 593
           PN+ATYRMVVDGLC +G
Sbjct: 348 PNAATYRMVVDGLCQIG 364



 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 51/155 (32%), Positives = 91/155 (58%)
 Frame = +3

Query: 27  VSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVDKGMELLKD 206
           V+F +++    ++G+ +EA SL  EM +R+++P VVTYN LI YLC++G+  +  ++L +
Sbjct: 281 VNFGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLE 340

Query: 207 MSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLMSDLGKRGE 386
           M   G  PNA TY ++++GLC +G F  A  ++  M      PR   +  ++  L K G 
Sbjct: 341 MQIGGCVPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGN 400

Query: 387 IEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGR 491
           I+ +  +  EM+KR+ + D+ ++  +I   C E +
Sbjct: 401 IDGSCFVLEEMEKRKLEFDLESWETIIKSACSENK 435



 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 49/189 (25%), Positives = 96/189 (50%)
 Frame = +3

Query: 21  NMVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVDKGMELL 200
           N V++ ++++G     + +EA  L  +M  R  +   V +  L+  L ++G+V++   LL
Sbjct: 244 NEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKSLL 303

Query: 201 KDMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLMSDLGKR 380
            +M ++   P+ VTY +++  LC  GK  EA K++ +M+  GC P    Y +++  L + 
Sbjct: 304 HEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVPNAATYRMVVDGLCQI 363

Query: 381 GEIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGRVSDAYKVLVELQVEGCEPNSATY 560
           G+ E A  +   M   R  P   T+N ++  L K G +  +  VL E++    E +  ++
Sbjct: 364 GDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSCFVLEEMEKRKLEFDLESW 423

Query: 561 RMVVDGLCA 587
             ++   C+
Sbjct: 424 ETIIKSACS 432



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/169 (22%), Positives = 88/169 (52%)
 Frame = +3

Query: 75  DEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVDKGMELLKDMSRKGKFPNAVTYALI 254
           ++A  LF  M +     T+ ++N+L+  L      D+  ++       G  PN VT+ ++
Sbjct: 122 EKAVELFNRMPQFNCTRTIQSFNALLNVLIDNDRFDEANDIFGKSYEMGFRPNTVTFNIM 181

Query: 255 MEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLMSDLGKRGEIEEARGLFVEMKKRRF 434
           ++G    G++ +A ++  +M  +  +P +V Y  L+  L ++G++++A  L  +M ++  
Sbjct: 182 VKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRKGDLDKAMALLEDMGQKGK 241

Query: 435 KPDVVTYNILINYLCKEGRVSDAYKVLVELQVEGCEPNSATYRMVVDGL 581
             + VTY +L+  LC   +  +A K++ ++   GC+     + ++++ L
Sbjct: 242 HANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLMNDL 290



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 40/137 (29%), Positives = 72/137 (52%)
 Frame = +3

Query: 180 DKGMELLKDMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVL 359
           +K +EL   M +        ++  ++  L    +F EA  I       G +P  V + ++
Sbjct: 122 EKAVELFNRMPQFNCTRTIQSFNALLNVLIDNDRFDEANDIFGKSYEMGFRPNTVTFNIM 181

Query: 360 MSDLGKRGEIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGRVSDAYKVLVELQVEGC 539
           +     +GE  +A  +F EM ++R +P VVTYN LI +LC++G +  A  +L ++  +G 
Sbjct: 182 VKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRKGDLDKAMALLEDMGQKGK 241

Query: 540 EPNSATYRMVVDGLCAV 590
             N  TY ++++GLC+V
Sbjct: 242 HANEVTYALLMEGLCSV 258


>ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529296|gb|EEF31265.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score =  292 bits (747), Expect = 3e-77
 Identities = 135/197 (68%), Positives = 170/197 (86%)
 Frame = +3

Query: 3   KMRFRLNMVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVD 182
           +M FRLN V FNI+IKG+++KGEW +A  +F+EMLERKV+P+VVTYNSLIGYLCR GE+ 
Sbjct: 178 EMGFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGELG 237

Query: 183 KGMELLKDMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLM 362
           K   L KDM +KGK PNAVTYAL+MEGLC +G++ EAKK++FDMEYRGCKP+ +N+GVLM
Sbjct: 238 KAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVLM 297

Query: 363 SDLGKRGEIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGRVSDAYKVLVELQVEGCE 542
           +DLGK+G+IEEA+ L +EMKKRRF+PDVV YNILIN+LCKEG+V++AYK L E+Q+ GCE
Sbjct: 298 NDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGGCE 357

Query: 543 PNSATYRMVVDGLCAVG 593
            N+ATYRM+ DG C VG
Sbjct: 358 ANAATYRMLADGFCQVG 374



 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 50/155 (32%), Positives = 84/155 (54%)
 Frame = +3

Query: 27  VSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVDKGMELLKD 206
           ++F +++    +KG+ +EA  L  EM +R+ +P VV YN LI +LC++G+V +  + L +
Sbjct: 291 LNFGVLMNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFE 350

Query: 207 MSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLMSDLGKRGE 386
           M   G   NA TY ++ +G C +G+F E  K++  M      PR+  +   +  L K G 
Sbjct: 351 MQIGGCEANAATYRMLADGFCQVGEFEEGLKVLNAMLVSRHAPRIETFNCFVVGLMKSGS 410

Query: 387 IEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGR 491
           I+ A  +  EM+KR+   D   +  L+   C E R
Sbjct: 411 IDGAFFVLEEMEKRKMALDSDGWEALVRCCCSEHR 445



 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 51/183 (27%), Positives = 98/183 (53%)
 Frame = +3

Query: 33  FNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVDKGMELLKDMS 212
           F  + + Y + G   +A  LF EM       T+ ++N+L+  L     +    +L    S
Sbjct: 118 FIALFEHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQLFDRSS 177

Query: 213 RKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLMSDLGKRGEIE 392
             G   N+V + ++++G    G++ +A K+  +M  R  +P +V Y  L+  L + GE+ 
Sbjct: 178 EMGFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGELG 237

Query: 393 EARGLFVEMKKRRFKPDVVTYNILINYLCKEGRVSDAYKVLVELQVEGCEPNSATYRMVV 572
           +A+GLF +M K+  +P+ VTY +L+  LC  G   +A K+L +++  GC+P +  + +++
Sbjct: 238 KAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVLM 297

Query: 573 DGL 581
           + L
Sbjct: 298 NDL 300



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 46/194 (23%), Positives = 96/194 (49%)
 Frame = +3

Query: 12  FRLNMVSFNIMIKGYVEKGEWDEACSLFEEMLERKVQPTVVTYNSLIGYLCRKGEVDKGM 191
           FR +  S++ ++        ++   ++   + +  V+     + +L  +  + G V K +
Sbjct: 76  FRHDYPSYSALVYKLARSRRFEAVETVLGYLQDFNVRCRDTLFIALFEHYGKVGLVAKAI 135

Query: 192 ELLKDMSRKGKFPNAVTYALIMEGLCFLGKFSEAKKIMFDMEYRGCKPRLVNYGVLMSDL 371
            L  +M+         ++  ++  L    +  +AK++       G +   V + +L+   
Sbjct: 136 RLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQLFDRSSEMGFRLNSVPFNILIKGW 195

Query: 372 GKRGEIEEARGLFVEMKKRRFKPDVVTYNILINYLCKEGRVSDAYKVLVELQVEGCEPNS 551
            K+GE  +A  +F EM +R+ +P VVTYN LI YLC+ G +  A  +  ++  +G  PN+
Sbjct: 196 LKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGELGKAKGLFKDMIKKGKRPNA 255

Query: 552 ATYRMVVDGLCAVG 593
            TY ++++GLC++G
Sbjct: 256 VTYALLMEGLCSMG 269